O75112  LDB3_HUMAN

Gene name: LDB3   Description: LIM domain-binding protein 3

Length: 727    GTS: 1.852e-06   GTS percentile: 0.599     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 7      BenignSAV: 30      gnomAD_SAV: 442      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPL 100
BenignSAV:                                                           I  N                                        S 
gnomAD_SAV:    I  NM     R   LH HR    #TS    Q S    T       CN # VT SIS   LPY        C       I    *H FL CMA L  R L 
Conservation:  2110211012220422323222411211111332143320323034224334333242344554544232141215142224132300121012120232
SS_PSIPRED:     EEEEEE       EEE         EEEEE     HHHH       EEEEE         HHHHHHHHHH     EEEEE                   
SS_SPIDER3:      EEEEEE      EEEE        EEEEE     HHHH       EEEEE  E      HHHHHHHHHH     EEEE                    
SS_PSSPRED:     EEEEEE                    EEEE     HHHH       EEEEE         HHHHHHHHHHH    EEEEE                   
DO_DISOPRED3:  D                                                                                  DDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                           DDDDDDDDDDDDDDD
DO_IUPRED2A:                  D D       DDDDDDD DDDDDDDD DD DDDDDDD DDDDDDDDDDDDDD      D D       DDDDDDDDDDDDDDDDD
MODRES_P:                                                 S                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            PVIPHQKDPALDTNGSLVAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLAEASDPGPPRASLRAKTSPEGARDLLGPKALPGSSQPRQYNNPIG 200
PathogenicSAV:                                                                                         L           
BenignSAV:     L      E T    D  M          G     NL              T    T                  D     F     L             
gnomAD_SAV:    S  S     T  M D  MVT SNLKG  G  IL NL#VGAI   V  W  TL LFTQ#    RLQSR G#N  SDRVWG  S E PL L RLKH   SV 
Conservation:  3213210111111111111111111111110011111111111111222211111111542242111111110111111111100113111122211111
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                          S S                                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            LYSAETLREMAQMYQMSLRGKASGVGLPGGSLPIKDLAVDSASPVYQAVIKSQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEEALRRSST 300
PathogenicSAV:      I                      V                                                            L          
BenignSAV:                    L         R                        R                                                 
gnomAD_SAV:      LTDPV    E   LNFQARTL  RF    R #  RDI GT  I  T  R   R Q  TAK THCF H   H  HF    M   S   #  #  QKAN 
Conservation:  1111111111111111111111111111111111430023113120232101112122112421222211332321223323333101032110011111
SS_PSIPRED:       HHHHHHHHHHHHHHH                                           HHH         HHHHHH           HHHHHHH   
SS_SPIDER3:       HHHHHHHHHHH                                            HHHHH H          HHHH          HHHHHHH    
SS_PSSPRED:        HHHHHHHHHHHH                                           HHHHHH       HHH               HHHHHHH   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDD      D       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDD  DD    DDDDD DDDDDDDDDDDDDDDDDD  D       DDDDDDDDDDDDDDDDDDDDDDD     DD   DDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                      S     S                                                                             
MODRES_M:                        R                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            PIEHAPVCTSQATTPLLPASAQPPAAASPSAASPPLATAAAHTAIASASTTAPASSPADSPRPQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRVVTT 400
PathogenicSAV:                                             M                                                       
BenignSAV:                                                     T                   G                               
gnomAD_SAV:     TGR#L      IILM  T   S#    S V TQL   GP  ADMT TTIA L  R  N   TPV   G TA T T#L    G*G#VSTT V E QI   
Conservation:  1111111111111111111111111111111111111111111111111111111111111100001111101011112211201011111200141132
SS_PSIPRED:                                               HHHH                                                     
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                            HHHHH                                                       
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            ASIRPSVYQPVPASTYSPSPGANYSPTPYTPSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNPAPSVAYSGGPAEPASRPPWVTDDSFSQKF 500
BenignSAV:                                    P P       V T          L                         R     H             
gnomAD_SAV:       Q  A R  R     RY  TK N    PH##    NL R    NA      IS  G VSI   VTS  SPHL VC RSRG AT H S E  N SFRN 
Conservation:  2121333233111111111111111111111111111111111111111111111111111111111111111111112311112224223011122111
SS_PSIPRED:                                                                                                   HHH  
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  

                       10        20        30        40        50        60        70        80        90     
AA:            APGKSTTSISKQTLPRGGPAYTPAGPQVPPLARGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCER 600
PathogenicSAV:                                                                                                    P
BenignSAV:                         C                                                                               
gnomAD_SAV:    VLD # N  N P#V Q   TC A C      P V I   K*   GNQ    SN S# VW  L   V H  YT      C*QS     Y   QPK IH  *
Conservation:  1011121101211111112111102120101113247376434741556463175146868664554245765663524621564315888733046940
SS_PSIPRED:                                       HHHHHH          HH   EEE   EEE                        EEE  EE    
SS_SPIDER3:          E                           HHHHHH         EE     EEE  EEEE   EE     EE     EE    EEEE  EE  HH
SS_PSSPRED:                                     HHHHHHH                EEE  EEEEE                      EEE       HH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                   
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                            
MODRES_M:                     R                R                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            CYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVC 700
PathogenicSAV:                                                                         N                           
BenignSAV:                                       I                                                                 
gnomAD_SAV:    RS     L      A    K  N#   AR  A  I VDWR R E RV    H# #  A NH S  GIEW D NS M#  N LMK   Y  QN  Y  T  
Conservation:  8832557918228207757464456556754268385362266445399788838685254415544163553366456538445552257556745543
SS_PSIPRED:    HHHHH     HH    HHHHHHHH                                 HHHHHHHH           HHHHHHHHH               
SS_SPIDER3:    HHHHHE  H      E HHHHHHH      HHH EEHH          EEE   E  HHHHHHH           H HHHHHHHHH         E EE 
SS_PSSPRED:    HHHHHH           HHHHHHHH                              HHHHHHHHHH             HHHHHHHH         EEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20       
AA:            HVNLEGQPFYSKKDRPLCKKHAHTINL 727
gnomAD_SAV:    RL   V#AS A     R # QT  TSS
Conservation:  202323313223132234434321111
SS_PSIPRED:                  EE  HHHHHH   
SS_SPIDER3:      E      E E  E   HHHHHH   
SS_PSSPRED:                     HHHHHHHH  
DO_DISOPRED3:                             
DO_SPOTD:                                 
DO_IUPRED2A: