O75161  NPHP4_HUMAN

Gene name: NPHP4   Description: Nephrocystin-4

Length: 1426    GTS: 2.37e-06   GTS percentile: 0.772     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 20      BenignSAV: 28      gnomAD_SAV: 930      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MNDWHRIFTQNVLVPPHPQRARQPWKESTAFQCVLKWLDGPVIRQGVLEVLSEVECHLRVSFFDVTYRHFFGRTWKTTVKPTKRPPSRIVFNEPLYFHTS 100
PathogenicSAV:   Y                                                                                       L         
BenignSAV:                                 M                                                                       
gnomAD_SAV:    V N*  V  *DM  LAR#  T#H  R  MT # I  R N#L   * #P     I    * C  YI  W     M   A  RM SLLTSNILHD       
Conservation:  1126111411211354111301100113033431422424121163121011321357646779134347885663511312121214416363486685
SS_PSIPRED:      HHHHHHHH                 EEEEEEEEE     EE   HHH    EEEEEEEEEEE    EEE                EEEEEE EEEEE 
SS_SPIDER3:       HHHHHHH                  EEEEEEEEE     EE  E E     EEEEEEEEEE    EEEE   E           EEEEEEEEEEEEE
SS_PSSPRED:      HHHHHHHH                   EEEEEEE                 EEEEEEEEEE    EEE                  EEEEEEEEEEE 
DO_DISOPRED3:  D                                                                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                     DD                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            LNHPHIVAVVEVVAEGKKRDGSLQTLSCGFGILRIFSNQPDSPISASQDKRLRLYHGTPRALLHPLLQDPAEQNRHMTLIENCSLQYTLKPHPALEPAFH 200
BenignSAV:                                                                           T                             
gnomAD_SAV:      Y# FM           Q     R F    F W    RLN     F# RMS   R  L   PYLPIRHST *  RL  T # N *HMMN YL  Q V  
Conservation:  6135343375966412132432130454975553571223321112022536163385863757505344132313522453436251551733711415
SS_PSIPRED:         EEEEEEEEEEEE     EEE EEEEEEEE                EEE       EEEEE    HHHH    EEE  EEEEEEE     HHHHHH
SS_SPIDER3:         EEEEEEEEEEEE     EEEEEEEEEEEE                 EEEE     EHHEH    HHH    EEEE   EEEEEE   H  HHHHH
SS_PSSPRED:         EEEEEEEEEEE             EEEE                  EE      HHHH       HHHHHH       EEEEEE   HHHHHHHH
DO_DISOPRED3:                                                D                                                     
DO_SPOTD:                                             DDD  DD                                                      
DO_IUPRED2A:                                                 DDDD               DDD                                
MODRES_P:                                               S                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            LLPENLLVSGLQQIPGLLPAHGESGDALRKPRLQKPITGHLDDLFFTLYPSLEKFEEELLELHVQDHFQEGCGPLDGGALEILERRLRVGVHNGLGFVQR 300
gnomAD_SAV:     PAA   GT M # S         S G * RC   S M R  VVL    A       #    QIR L P  Y L  S    V  WH C DM S   LMHG
Conservation:  9595624465130588513413223717349533321331552625063953424533752231052234111001111414365663354555434322
SS_PSIPRED:    H     EE                            EEEEHHHEEEEE   HHHHHHHHHHHHHHHHHH          EEEEEEEEEEEEE   EEE  
SS_SPIDER3:    H    EEE                        E   EEEEEEEEEEEE   HHHHHHHHHHHHHHHHHH           EEEEEEEEEE      EE  
SS_PSSPRED:    H    EEE                              HHH  EEEEE   HHHHHHHHHHHHHHH             EEEEEEEEEEEE     EE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                        D  DD DDDDDD                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            PQVVVLVPEMDVALTRSASFSRKVVSSSKTSSGSQALVLRSRLRLPEMVGHPAFAVIFQLEYVFSSPAGVDGNAASVTSLSNLACMHMVRWAVWNPLLEA 400
PathogenicSAV:                                          C                                                          
BenignSAV:                   M                                                                                     
gnomAD_SAV:    L  I P  Q # G*RHL     E A     # R  PM F #C H A IIS    V   *  SML N VV #SSV AFN VFSV#Y# TAH V     MG 
Conservation:  6553442301122131113111101111211102327247535372244144333437597764323141332212232131342532468336260122
SS_PSIPRED:      EEEE                            EEEEE   EE         EEEEEEEEEEEE          EE   HHH  EEEEEEEEEEEE   
SS_SPIDER3:     EEEEE                            EEEEE    E  H      EEEEEEEEEEEEEE         E       EEEEEEEEEEEE EE 
SS_PSSPRED:     EEEEE                            EEEEE              EEEEEEEEEEEE                    EEEEEEHHH      
DO_DISOPRED3:            DDDDDDDDDDDDDDDDDDDDDDDD                                    DDDDDDDDDDDD                  
DO_SPOTD:                    DDDDDDDDDDDDDDDDDD                                                                    
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DSGRVTLPLQGGIQPNPSHCLVYKVPSASMSSEEVKQVESGTLRFQFSLGSEEHLDAPTEPVSGPKVERRPSRKPPTSPSSPPAPVPRVLAAPQNSPVGP 500
PathogenicSAV:                                                                     W                               
BenignSAV:                                                                                                     R   
gnomAD_SAV:     T   N SPH  T# SLLQ    EI   T N  G  #M LA FQ R P #  GY G RM   I S#  WQ  G SH# SL LRV  LP  T LR  R   
Conservation:  0111316385752124712265522311111402211132525382341122221123100101111211011223121012211111011322244255
SS_PSIPRED:        EEEE        HHH EEEE   HH   HHH     EEEEEEEEE                                                   
SS_SPIDER3:        EEEEEE      HHH  EEE         HH      EEEEEEEE                                                   
SS_PSSPRED:        EEEE             EEE                 EEEEEEE                                                    
DO_DISOPRED3:                             DDDDDDDDDDDD            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:       DDDDDDD            D       DDDDD            DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GLSISQLAASPRSPTQHCLARPTSQLPHGSQASPAQAQEFPLEAGISHLEADLSQTSLVLETSIAEQLQELPFTPLHAPIVVGTQTRSSAGQPSRASMVL 600
BenignSAV:                                             L  G                        E                               
gnomAD_SAV:       S      LW L     T  A    YSF   L P    L  GDF  VG N      I     GK  EG Q M# R    L  E      # L   #  
Conservation:  2562544222301221111201111131110100001112101324375623310022101001112424444252436221322114222026742432
SS_PSIPRED:       HHHH                          HHHHH         HHHHHH          HHHHHHH         EEE             HHHHH
SS_SPIDER3:       HHHH                          HHHHH           HH            HHHHHH           E              HHHHH
SS_PSSPRED:        HHH                          HHHHH                         HHHHHHH                          HHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                        
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D D   D  D D                D  DDDDDDDD  DDDD  D  

                       10        20        30        40        50        60        70        80        90     
AA:            LQSSGFPEILDANKQPAEAVSATEPVTFNPQKEESDCLQSNEMVLQFLAFSRVAQDCRGTSWPKTVYFTFQFYRFPPATTPRLQLVQLDEAGQPSSGALT 700
PathogenicSAV:                           M                          G                                              
BenignSAV:                      K                                     N                                            
gnomAD_SAV:     * FSS K      *AGK   TA LAM   E         SKIM R F  G  SRNY* AL L #ACYI    C SSTAMAQ H       SR    VV 
Conservation:  6232467263701324533135024204234284281632735365797658121110211571355577768675544744949501300101112123
SS_PSIPRED:    HHH                            HHH       EEEEEEEEEEE            EEEEEEEE          EEEEE             
SS_SPIDER3:    HHH      E                   HHHH        EEEEEEEEEEEE           EEEEEEEE E   E    EEEEE             
SS_PSSPRED:    HH                           HHHHH        EEEEEEEE              EEEEEEEE          EEEEE             
DO_DISOPRED3:                                                                                         DDDDDDDDDD   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:              DDDDDD  DDDDDDDDDDDDDDD                                                 DDDDD            

                       10        20        30        40        50        60        70        80        90     
AA:            HILVPVSRDGTFDAGSPGFQLRYMVGPGFLKPGERRCFARYLAVQTLQIDVWDGDSLLLIGSAAVQMKHLLRQGRPAVQASHELEVVATEYEQDNMVVSG 800
PathogenicSAV:                                   W                  R           R         R     Q                  
BenignSAV:                                            H            N           I                                   
gnomAD_SAV:    Y  L G  NDA            TL A     D WC   LC  L #  TEI#NR   RF#R   IH  L IC DWL L SC K V #VIA KRG VM   
Conservation:  2382132145312122585543726421364479313823665054765969964777849855427636695552866414564734564145113232
SS_PSIPRED:    EEEEEE            EEEEEEE        HHHHHHHHHHH EEEEEEE      EEEEEHHHHHHHHH     EEEEEEEEEEE            
SS_SPIDER3:    EEEEEE           EEEEEEE         HHHHHHHHHHH  EEEEEE    HHEEHHHEEEHHHHHH     EEEEEEEEEEEEEE      EE 
SS_PSSPRED:    EEEEEE            EEEEEEE        HHHHHHHHHHHHEEEEEEE    HHHHHHHHHHHHHHHH    HHHEEEEEEEE             
DO_DISOPRED3:                                                                                                DDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DMLGFGRVKPIGVHSVVKGRLHLTLANVGHPCEQKVRGCSTLPPSRSRVISNDGASRFSGGSLLTTGSSRRKHVVQAQKLADVDSELAAMLLTHARQGKG 900
PathogenicSAV:                                                            E                                        
BenignSAV:                        W                           W                                             R      
gnomAD_SAV:     V  L HIE#LSIYL  RVQ R   T#LD L GHQ KS RA STY YW M  Y   C  E  IFP  N K  YMM    PV M R  VG#V  R QE  #
Conservation:  2112232116325133358296525564721121111011023321342121121112046421100112102213424432122331222012021201
SS_PSIPRED:                  EEE  EEEEEEE                     EEE                  HHH  HHHHEE     HHHHHHHHHHH     
SS_SPIDER3:     H    EEEE    EEEE EEEEEEEE  E               EEEEE        E           HHHHHHHHHH    HHHHHHHHHHHH    
SS_PSSPRED:           EE     EEE EEEEEEE                      EEE                      HHHHHHH     HHHHHHHHHHH     
DO_DISOPRED3:  DDDDDD                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                            DDD        DDDDDDD                       DDDDD
DO_IUPRED2A:                                    DDDDDDDD DDDDDDDDDDD      DDDDD D  DD   DDD               DDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PQDVSRESDATRRRKLERMRSVRLQEAGGDLGRRGTSVLAQQSVRTQHLRDLQVIAAYRERTKAESIASLLSLAITTEHTLHATLGVAEFFEFVLKNPHN 1000
PathogenicSAV:                                              A                              M             S         
BenignSAV:          C                               MQ                   Q H          G                            
gnomAD_SAV:    R  ITCKLY  H CQ  # SFLSV  PRE#  QC MGM V *NAH    QY  FVTT Q CM  K  VNV G TTIA QM YTMVEITKVL  M    PD
Conservation:  0000012121111432243124321411110100011012211032112353223122442182418214833466416454536938566982859944
SS_PSIPRED:            HHHHHHHHHHHHHHHHHH           HHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHH  EEEEEE     EEEEEEEEE    
SS_SPIDER3:         H  HHHHHHHHHHHHHHHHHHH             HHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHH  EEEEEEE     EEEEEEEEE    
SS_PSSPRED:            HHHHHHHHHHHHHHHHHH             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  EEEEEEE   EEEEEEEEE    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                       
DO_SPOTD:      DDDDDDDDDDD          D DDDDDDDDDDDDDDDDDDD                                                          
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDD    D DDDDDDDDD                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            TQHTVTVEIDNPELSVIVDSQEWRDFKGAAGLHTPVEEDMFHLRGSLAPQLYLRPHETAHVPFKFQSFSAGQLAMVQASPGLSNEKGMDAVSPWKSSAVP 1100
PathogenicSAV:                                                                                                  T  
BenignSAV:                                                H                                                        
gnomAD_SAV:      YM     NSSK  IVM R Q  H  R #A Y L AK TSYPH   TS    HLNK T I  N  TC#      L  F R NSK*V  T#  #   S S
Conservation:  3337756124335654523225634662331306456325741122005345656263345964564521120301220100103210010000102010
SS_PSIPRED:      EEEEEEE     EEEE HHHHHHHHHHH                    EEE    EEEE EEEEEEE                               
SS_SPIDER3:      EEEEEEE     EEE  HHHHHHHHHH        HH E        EEEE    EEEEEEEEEEEE     HE                        
SS_PSSPRED:      EEEEEEE    EEEE  HHHHHHHHHHH      HHHHHHH     EEEEE    EEEEEEEEEEE                                
DO_DISOPRED3:                                                                           DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                    DDDDDDDDDDDDDD        
DO_IUPRED2A:    DDDDDD                     D                                                 D       DD D  DDD     

                       10        20        30        40        50        60        70        80        90     
AA:            TKHAKVLFRASGGKPIAVLCLTVELQPHVVDQVFRFYHPELSFLKKAIRLPPWHTFPGAPVGMLGEDPPVHVRCSDPNVICETQNVGPGEPRDIFLKVAS 1200
BenignSAV:                                                        S       L                                        
gnomAD_SAV:    A RTR   *TTDA   DMFYVP    SYMGHE  H   L*    R V H LS Y Y  VLM   # E#R YAH INT##FR I#K  SR  Q L     T
Conservation:  3413631412222344534251531274344735654565444465444554411134213202310113255976436694521322546464545633
SS_PSIPRED:      EEEEEEEEE   EEEEEEEEEEE   EE EEEEEE   HHH EEEEE                    EEEEE     EEEEEE       EEEEEEE 
SS_SPIDER3:       EEEEEEEE   EEEEEEEEEEE   EEEEEEEEE     EEEEEEE                    EEEEE    EEEEEEE      EEEEEEEE 
SS_PSSPRED:     HHHHHHHHH    EEEEEEEEEEE      EEEEEE  HHHHHHHHHH                    EEEEE    EEEEEE        EEEEEEE 
DO_DISOPRED3:  DDD                                                                                                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                     D               D                 

                       10        20        30        40        50        60        70        80        90     
AA:            GPSPEIKDFFVIIYSDRWLATPTQTWQVYLHSLQRVDVSCVAGQLTRLSLVLRGTQTVRKVRAFTSHPQELKTDPKGVFVLPPRGVQDLHVGVRPLRAGS 1300
PathogenicSAV:                                                                                    C  E             
BenignSAV:                                        M                                                                
gnomAD_SAV:    # RL ME  L #   AC  V A EM#  FV   *CM    IT #  CPFFF#P  *IMG  G  A Q R P A L  I #  LHAME P   MS    DN
Conservation:  4348233285525718185537263754547454446334326313223533583233545333365425333381327253412434624254522282
SS_PSIPRED:          EEEEEEEE       HHHHEEEEEEEE    HHHEEE     EEEEE      EEEEEE     EEE     EE       EEEEEEEE     
SS_SPIDER3:         EEEEEEEEE       EEEEEEEEEEEE    EEEEEEEEEEEEEEEE      EEEEEE    EEEE    EEEE      EEEEEEEE     
SS_PSSPRED:          EEEEEEEE       HHHHEEEEEEEE EEEHHHHHE   EEEEEE       EEEEE              EEE      EEEEEEE      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                   D                                   

                       10        20        30        40        50        60        70        80        90     
AA:            RFVHLNLVDVDCHQLVASWLVCLCCRQPLISKAFEIMLAAGEGKGVNKRITYTNPYPSRRTFHLHSDHPELLRFREDSFQVGGGETYTIGLQFAPSQRVG 1400
gnomAD_SAV:    C  R SV       V     MG S C S    T #V   TA*  D     SC   S#FW  LRQ# # L#  QL G  L  E#R  *AVA #LT  H GD
Conservation:  4524755774512444348644333327445357541333324453352435367632141407233453352333204541442233463243430124
SS_PSIPRED:    EEEEEEEEE    EEEEEEEEEEE     EEEEEEEEEE       EEEEEEE      EEEEEEE  HHHEEE   EEEE    EEEEEEEE       
SS_SPIDER3:    EEEEEEEEE    EEEEEEEEEEE     EEEEEEEEEE      E EEEEEE      EEEEEE     HEEE    EEE     EEEEEEE       
SS_PSSPRED:     EEEEEE      HHHHHHEEE       HHHHHHHHHH         EEEEE      EEEEEE            EEEE    EEEEEEEE       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    DD                                                 

                       10        20      
AA:            EEEILIYINDHEDKNEEAFCVKVIYQ 1426
BenignSAV:                 N             
gnomAD_SAV:      AV  C   RGE  KK  YM I  *
Conservation:  03354433341342343433335120
SS_PSIPRED:    EEEEEEEEE      EEEEEEEEEE 
SS_SPIDER3:      EEEEEEE     EEEEEEEEEEE 
SS_PSSPRED:     EEEEEEE      HHHHHHHEEEE 
DO_DISOPRED3:                            
DO_SPOTD:                                
DO_IUPRED2A: