O75503  CLN5_HUMAN

Gene name: CLN5   Description: Ceroid-lipofuscinosis neuronal protein 5

Length: 358    GTS: 2.765e-06   GTS percentile: 0.864     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 14      BenignSAV: 5      gnomAD_SAV: 181      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAQEVDTAQGAEMRRGAGAARGRASWCWALALLWLAVVPGWSRVSGIPSRRHWPVPYKRFDFRPKPDPYCQAKYTFCPTGSPIPVMEGDDDIEVFRLQAP 100
PathogenicSAV:                                                               #             Y                       
BenignSAV:                              R                                                                          
gnomAD_SAV:    IVL IG# R#S#     DV W #  CY# V P   P FL#CF   C    H * M **S   H           SS     TVL #  NY    LQ  V 
Conservation:  2222222222222222222222200000000000000022222222222210222313844299139669482769994822490523193546696759
STMI:                                 MMMMMMMMMMMMMMMMMM                                                           
SS_PSIPRED:              HHHH         HHHHHHHHHHHHHHHH  HH                            EE                 EEEEEEEE  
SS_SPIDER3:              HHHHHH         HHHHHHHHHHHHH     E                            EE E              EEEEEEEE E
SS_PSSPRED:                HHHHHHH     HHHHHHHHHHHHH                                                     EEEEEEEE  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDD                                                                              
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_IUPRED2A:   DDDDDDDDDDDDDDD                                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            VWEFKYGDLLGHLKIMHDAIGFRSTLTGKNYTMEWYELFQLGNCTFPHLRPEMDAPFWCNQGAACFFEGIDDVHWKENGTLVQVATISGNMFNQMAKWVK 200
PathogenicSAV:                                           SY    P      S #                                          
BenignSAV:                                                                                                 K       
gnomAD_SAV:     G     A   Y   L   FR  GI* D    #    I  RR  ASAYP*S IH L R    T   S   H I *Q #E  IH  P#  ST K V N   
Conservation:  7878657435654356969496472054366949998699989989964633114999898999966659580993479763344346712682553964
SS_PSIPRED:    EEHHHHHHHHHHH EEEEEEEEEE      EEEEEEE                         EEEEE    HHEE    EEEEEEEEEHHHHHHHHHHHH
SS_SPIDER3:    HEHHEEHHHHHHHHHHHH EEEEE      EEEEEEEE      E  EE       EE    EEEE       E    E EEEEEEE HHHHHHHHHHHH
SS_PSSPRED:     HHHHHHHHHHHHHHHHHEEEEEE      EEEEEEEE                        EEE               EEEEEEE  HHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                   N            N                                  N                      

                       10        20        30        40        50        60        70        80        90     
AA:            QDNETGIYYETWNVKASPEKGAETWFDSYDCSKFVLRTFNKLAEFGAEFKNIETNYTRIFLYSGEPTYLGNETSVFGPTGNKTLGLAIKRFYYPFKPHLP 300
PathogenicSAV:         D                    N                                N                                     
BenignSAV:                       A                               S                                                 
gnomAD_SAV:       D E #C   H   #RA EV  #  F NYC  A S L    G      DTQP   KKL C#  R#   S     ESA*      V#RIL  SL  YF 
Conservation:  1992998898993834432124228856778738559472563448617433485984547586792579754369530424256125528812656335
SS_PSIPRED:    HH     EEEEEEEE       EEEEEE  HHHHHHHHHHHHHH    EE       EEEEEE   EE             HHHHHHHHHHHHH      
SS_SPIDER3:    HH      EEEEEEEE      EEEE    HHHHHHHHHHHHHH   EEEEE     EEEEE    EEE            HHHHHHHHHHHHH      
SS_PSSPRED:    HH       EEEEEE        EEE      HHHHHHHHHHHHH       E    EEEEE     EE            HHHHHHHHHHHHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:        N                                                   N               N         N                   

                       10        20        30        40        50        
AA:            TKEFLLSLLQIFDAVIVHKQFYLFYNFEYWFLPMKFPFIKITYEEIPLPIRNKTLSGL 358
PathogenicSAV:                         C    C                            
BenignSAV:                       R                                       
gnomAD_SAV:          R    S   T  REL   C S  * S##N    T   K    SV  E V   
Conservation:  2154326434542154324299778845993995839654638785787112221222
SS_PSIPRED:    HHHHHHHHHHHHHHHHH  EEEEEE  EEEE       EEEEEEE             
SS_SPIDER3:    HHHHHHHHHHHHHHHHH   EEEEE  EEEEEE     EEEEEEE             
SS_PSSPRED:    HHHHHHHHHHHHHHHHH   EEEEEEEEEEEEE     EEEEEEE             
DO_DISOPRED3:                                                   D DDDDDDD
DO_SPOTD:                                                        DDDDDDDD
DO_IUPRED2A:                                                             
CARBOHYD:                                                         N