O75603  GCM2_HUMAN

Gene name: GCM2   Description: Chorion-specific transcription factor GCMb

Length: 506    GTS: 1.456e-06   GTS percentile: 0.427     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 8      BenignSAV: 11      gnomAD_SAV: 252      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MPAAAVQEAVGVCSYGMQLSWDINDPQMPQELALFDQFREWPDGYVRFIYSSDEKKAQRHLSGWAMRNTNNHNGHILKKSCLGVVVCTQACTLPDGSRLQ 100
PathogenicSAV:                                               L               S                                     
BenignSAV:           H                                   E         N  N                                            
gnomAD_SAV:    TLV P H*TG E     #  CG   #   RG D C # *  SESSMS     N  N  CQ  S ST#S   N                   I  HS H  
Conservation:  0000000011000202101122112402331211260636766452635721133347564666765556585345787597976562228220251222
SS_PSIPRED:      HHHHH                      HHHHHH          EEEEE    HHHHHHH             EEEEEEE EEEEE          EEE
SS_SPIDER3:      HHHHH                        H  E          EEEEE    H        EEE E      EHEEEEE EEEEE    E     EEE
SS_PSSPRED:      HHHHHH                     HHHHH           EEEEE     HHHH                EEEEEE EEEEE           EE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_SPOTD:      DDDDDDDDDDDD                                                                                        
DO_IUPRED2A:                                                               DDDDD                                   
DNA_BIND:                        LSWDINDPQMPQELALFDQFREWPDGYVRFIYSSDEKKAQRHLSGWAMRNTNNHNGHILKKSCLGVVVCTQACTLPDGSRLQ
METAL:                                                                                         C     C   C         

                       10        20        30        40        50        60        70        80        90     
AA:            LRPAICDKARLKQQKKACPNCHSALELIPCRGHSGYPVTNFWRLDGNAIFFQAKGVHDHPRPESKSETEARRSAIKRQMASFYQPQKKRIRESEAEENQD 200
PathogenicSAV:          W                                                                                          
BenignSAV:                     V                                                                                   
gnomAD_SAV:     SL   Y  W      V   R#    F TY#   R  I    QI  DV   R #*        RE A      TF #  #PSH S  MT Q  KT   K 
Conservation:  8495557568386334056492538344485966978899889364125667358185846866835663973116221121101114300314200000
SS_PSIPRED:    EE HHHHHHHHHHHHH         EEE           EEEEEE  EEEEEE              HHHHHHHHHHHHHH     HHHHHHHHHH    
SS_SPIDER3:    E H H HHHHHHHHH          EEEE       EEEEEEEEE  EEEEEE   E           HHHHHHHHHHHH      HHHHHHHHHH    
SS_PSSPRED:    E HHHHHHHHHHHHHH         EEE            EEEE   EEEEEE              HHHHHHHHHHHHH      HHH HHH       
DO_DISOPRED3:                                                                        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                       D DDDDDDDDDDDDDDDDDD  DDDDD      DDDDDDDDDDDDDDD
DNA_BIND:      LRPAICDKARLKQQKKACPNCHSALELIPCRGHSGYPVTNFWRLDGNAIFFQAKGVHDHPRPESKSETEARRSA                          
METAL:                          C  C        C                          H H                                         

                       10        20        30        40        50        60        70        80        90     
AA:            SSGHFSNIPPLENPEDFDIVTETSFPIPGQPCPSFPKSDVYKATCDLATFQGDKMPPFQKYSSPRIYLPRPPCSYELANPGYTNSSPYPTLYKDSTSIPN 300
PathogenicSAV:                                                   E                                                 
BenignSAV:       S                       V                                                      D                  
gnomAD_SAV:    #NSLC       K      G   G LV    F    TYV            V E        NQI         CAS  # D  A LCR  C #  GV# 
Conservation:  1120113331111012102122244300053332233442300044321112101330120302121110121342331422223433331215110010
SS_PSIPRED:                                                   HH                                                   
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D          DD DDD DDDDDD D                                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDD D                                    D   
DO_IUPRED2A:   DDDDDDDDDDDDDD D  DDDDDD                                    DD                DD     DDDDDDDDD      

                       10        20        30        40        50        60        70        80        90     
AA:            DTDWVHLNTLQCNVNSYSSYERSFDFTNKQHGWKPALGKPSLVERTNHGQFQAMATRPYYNPELPCRYLTTPPPGAPALQTVITTTTKVSYQAYQPPAMK 400
PathogenicSAV:                                                                               Q              S      
BenignSAV:                   D                                      V                                              
gnomAD_SAV:     R CI      R GS  R CG     AS LP   ##    R M G    PY  VT SLC      *TCFM   SRS G   M     Q   * S HL  T
Conservation:  1200101310212102011011221001302243211221102221211101012111221121214101111110202422123222143134112212
SS_PSIPRED:         HH                           HHH                                           EEEE              HH
SS_SPIDER3:                                              HH        H                          EEE E     EE  E      
SS_PSSPRED:                                                                                    EEE     EE E        
DO_DISOPRED3:        D  DDD DDDDDDDDDD                                                                             
DO_SPOTD:       DD      DDDDDDDDDDDDDDDDDDDDDDD     DDDDDDDDDDDD                                                   
DO_IUPRED2A:                                       DDDD   DDDDDD   DDD               DD    DDDDDDD                 
REGION:                                                                                      LQTVITTTTKVSYQAYQ     

                       10        20        30        40        50        60        70        80        90     
AA:            YSDSVREVKSLSSCNYAPEDTGMSVYPEPWGPPVTVTRAASPSGPPPMKIAGDCRAIRPTVAIPHEPVSSRTDEAETWDVCLSGLGSAVSYSDRVGPFFT 500
BenignSAV:                                     L                                                                   
gnomAD_SAV:     G   * L R L  #C## #AR  I*#  G #LL L  PT     T V  V  YQ   H    S K        E I GA V  PD T    HKAV    
Conservation:  1112112021122221111211110450000000000000000000101123310201120112301121411111103010020001021112112101
SS_PSIPRED:                                                                                EEEE                    
SS_SPIDER3:        H H                                                                     EEEEEE                EE
SS_PSSPRED:                                                                                  EE                    
DO_DISOPRED3:                        DD   DDDDDDDDDDDDDDDDDDD                  DD                                  
DO_SPOTD:                                           DDDDDDDD                       DDD                             
DO_IUPRED2A:              D            D DDDD DDDDDDDDDDDDDDDDDDDDD         DDDDDDDDD   D                          

                     
AA:            YNNEDF 506
PathogenicSAV:  #    
gnomAD_SAV:     HS   
Conservation:  322134
SS_PSIPRED:          
SS_SPIDER3:          
SS_PSSPRED:          
DO_DISOPRED3:        
DO_SPOTD:            
DO_IUPRED2A: