O76039  CDKL5_HUMAN

Gene name: CDKL5   Description: Cyclin-dependent kinase-like 5

Length: 1030    GTS: 6.215e-07   GTS percentile: 0.078     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 75      BenignSAV: 39      gnomAD_SAV: 248      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MKIPNIGNVMNKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELL 100
PathogenicSAV:                    #G#  R     G      S VFR  N             #    P  F   ##                        P   
BenignSAV:                                                                     Q                                   
gnomAD_SAV:      F DT D                           R                   M        Q              LQS                  
Conservation:  7002030211022212341223212233132313323432344744366744444765745544435344757755445946447557555575999999
SS_PSIPRED:         HHHHHHHEEEEEEEEE    EEEEEEE     EEEEEEEE     HH  HHHHHHHHHHHH         EEHHHH   EEEEEE     HHHHH
SS_SPIDER3:           HHHH  EEEEEEEE   EEEEEEEE     EEEEEEE       HHHHHHHHHHHHHH    H HH HHHHHHH   EEEEEE   H HHHHH
SS_PSSPRED:         HHHHHHH EEEEEE  EE EEEEEE       EEEEEEE       HHHHHHHHHHHHHHHH  HHHHHHHHHHHH   EEEEEEHHHHHHHHHH
DO_DISOPRED3:  BBBBBBBB                                                                                            
DO_SPOTD:      DDDDD                                                                                               
DO_IUPRED2A:                                                                                                       
NP_BIND:                         VGEGAYGVV                                                                         
BINDING:                                                K                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            EEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGNNANYTEYVATRWYRSPELLLGAPYGKSVDMWSVGCI 200
PathogenicSAV:               N  RR  T    R   MF  HM L S         R #G    P             I  ## # LAP          # GLG   
gnomAD_SAV:      I           C        DC                 V  S           H   D                       T              
Conservation:  5527574235774475499977759775557744999999999722749999999999599974577757977997799977999579797759795975
SS_PSIPRED:    HH      HHHHHHHHHHHHHHHHHHHH  EE     HHHEEE    EEEE HHH HHH            HH  EE   HHH       HHHHHHHHHH
SS_SPIDER3:    HH      HHHHHHHHHHHHHHHHHHHH         HHHEEE     EEEE  HHHHHH        HHHEEHH E   HHE          HHHHHHH
SS_PSSPRED:    HH      HHHHHHHHHHHHHHHHHHHH           EEEE     EEE  HHHHHH          HHH         EE          HHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
ACT_SITE:                                        D                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            LGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQTQ 300
PathogenicSAV: P GR YE R   E     PP      R                                                         #  I  #         
BenignSAV:                                              T                                                     A    
gnomAD_SAV:                        L   R      A         TC R  Q     R                                        LA    
Conservation:  4479779777797979475757777599595377577775746557569747566779676645442314678666773947379679795969349934
SS_PSIPRED:    HHHHH          HHHHHHHHHHHH    HHHHHHHHH                 HHHHH     HHHHHHHHHH    HHH   HHHHH  HHH   
SS_SPIDER3:    HHHHHH         HHHHHHHHHHHH    HHHHHHHH    H             HHHHH     HHHHHHHHHHH   HH    HHHHH  HHH   
SS_PSSPRED:    HHHH           HHHHHHHHHHHH    HHHHHHHHH                 HHHHHHHH  HHHHHHHHHHHH        HHHHHH       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                   DDD DDDDDDDDDDDDDDDD                                  D
DO_IUPRED2A:                                                                                             D     DDDD

                       10        20        30        40        50        60        70        80        90     
AA:            RLLDRSPSRSAKRKPYHVESSTLSNRNQAGKSTALQSHHRSNSKDIQNLSVGLPRADEGLPANESFLNGNLAGASLSPLHTKTYQASSQPGSTSKDLTNN 400
PathogenicSAV:                                                                                                   T 
BenignSAV:                     R            S                                  T                           A      H
gnomAD_SAV:     F  #           R    S  D    R NS    Y K  G  S  V IRPSQP K   SS N    TF A     R       GN       E AT 
Conservation:  7226746375497747314353234934436542473466543771535444236147242244386864123145995526244023132534574345
SS_PSIPRED:            HHHH                     HHHHHHH                       HHH                                  
SS_SPIDER3:                                                                                                        
SS_PSSPRED:          HHHHHH                        HHHHH                                                           
DO_DISOPRED3:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            NIPHLLSPKEAKSKTEFDFNIDPKPSEGPGTKYLKSNSRSQQNRHSFMESSQSKAGTLQPNEKQSRHSYIDTIPQSSRSPSYRTKAKSHGALSDSKSVSN 500
BenignSAV:                                                C   #            S     R                       T         
gnomAD_SAV:    S        D E  A   L         L   H T        #  #             DDE #QR             C G     R           
Conservation:  5264355555143624573112342124343883554323431435837357565466311673268421431142421254444595753947557668
SS_PSIPRED:                                                                                   HHHHHHHHH            
SS_SPIDER3:                                                                                   HHHH                 
SS_PSSPRED:                                                                                   HHH                  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:            S                                                                       S                     

                       10        20        30        40        50        60        70        80        90     
AA:            LSEARAQIAEPSTSRYFPSSCLDLNSPTSPTPTRHSDTRTLLSPSGRNNRNEGTLDSRRTTTRHSKTMEELKLPEHMDSSHSHSLSAPHESFSYGLGYTS 600
BenignSAV:            TV                                                      R         L  T                       
gnomAD_SAV:      D  T TV A          V   F  T A  G   MT          Q  VM   C A             L P#G    Y    S K         R
Conservation:  9261414026322256875895683453491314614132213622330213545536432284531264131342152133454345564336557969
SS_PSIPRED:    HHH EE                                                             HHHH                             
SS_SPIDER3:    H  HE              EEE                                              HH                              
SS_PSSPRED:     HHHHHH                                                                                             
DO_DISOPRED3:  DDDDDDDDDDD  D DDDD DDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      DDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PFSSQQRPHRHSMYVTRDKVRAKGLDGSLSIGQGMAARANSLQLLSPQPGEQLPPEMTVARSSVKETSREGTSSFHTRQKSEGGVYHDPHSDDGTAPKEN 700
PathogenicSAV:                                               L                                                     
BenignSAV:                                                                                                    T    
gnomAD_SAV:         R #              N      NT   ISG  S         E     Q    IP                 N    M       N  TA   
Conservation:  8668656768686863843252230102422593253977998695852144142411133342754376233254333111251547132773234666
SS_PSIPRED:                 EE               HHH   HHHHHH                     HH                                   
SS_SPIDER3:                 EE     E            HHHHH H               HH        H                  EE             H
SS_PSSPRED:                 EEEE                 HHHHHHHH                                                          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDD D
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            RHLYNDPVPRRVGSFYRVPSPRPDNSFHENNVSTRVSSLPSESSSGTNHSKRQPAFDPWKSPENISHSEQLKEKEKQGFFRSMKKKKKKSQTVPNSDSPD 800
PathogenicSAV:                  M                                                                                  
BenignSAV:       V                              A                                   K                    P     N   
gnomAD_SAV:      VS                 C     R   M AG P V#       S  R     NS       C      G         L       P I   H A 
Conservation:  5137553685555767566796674353520231513123243211133335442552623361142463083856656465354454323144122224
SS_PSIPRED:                              EE                                 HHH    HHH HHHHHHHHHHHH                
SS_SPIDER3:                  EEE         EEE   E                            HHH        HHHH    H                   
SS_PSSPRED:                                                                             HHHHHHHHHHHH               
DO_DISOPRED3:                        DD  DDDDDDDDDDDDDDDDDDDDDDDDD               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                         S                                        S                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LLTLQKSIHSASTPSSRPKEWRPEKISDLQTQSQPLKSLRKLLHLSSASNHPASSDPRFQPLTAQQTKNSFSEIRIHPLSQASGGSSNIRQEPAPKGRPA 900
BenignSAV:                                                                                                  T      
gnomAD_SAV:      M    V      I      H KN  H#                     NL   VLHY S A                     R    Q  STL     
Conservation:  1222753133243235710493276124131524254544567555333312033525675333412822427162330221224232163232141322
SS_PSIPRED:    HHHHHHHH              HHHHHHH       HHHHHHHHH                   HH             HH                   
SS_SPIDER3:    HHHEHH                HHHH HH      HHHHHHHH                                   H                     
SS_PSSPRED:    HHHHHH                HHH           HHHHHHH                                                         
DO_DISOPRED3:  DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            LQLPDGGCDGRRQRHHSGPQDRRFMLRTTEQQGEYFCCGDPKKPHTPCVPNRALHRPISSPAPYPVLQVRGTSMCPTLQVRGTDAFSCPTQQSGFSFFVR 1000
PathogenicSAV:                                     Y                                                               
BenignSAV:                           C                     R          H         I   Q     L R                C   M 
gnomAD_SAV:         SR     # RR     SH    P               T  L I  *S  H  ##   H AV  Q I   L RE #        I   #L   #K
Conservation:  4445222222222222222222222222222253122225421691333141222221332133423115132222222222222222232521414115
SS_PSIPRED:                          EEEEEEHHH   EEE                            EEEEE EEE   EEEE             HHHHHH
SS_SPIDER3:     E                 HH  EEEE       EEE                            EEEE       EEEEE             HHHHHH
SS_PSSPRED:                       HHHHHHHHHHHHH                                 EEEEE       EEEE             HHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDD                                                              DDDDDDDDD  DD      
DO_SPOTD:      DDDDDDDDDDDDDDDDDD                                                                                  
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDD         DD         DDDDDDDDDD  DDDDDD DD                  D              

                       10        20        30
AA:            HVMREALIHRAQVNQAALLTYHENAALTGK 1030
BenignSAV:      ITS                  G       
gnomAD_SAV:     IIS      V IKE V  K  QSE  MV 
Conservation:  143222222222222244822233321320
SS_PSIPRED:    HHHHHHHHHHHH  HHHHHHHHHHHHH   
SS_SPIDER3:    HHHHHHHHHHHHH   EEEEE   H EE  
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHH       
DO_DISOPRED3:                        DDDDDDDD
DO_SPOTD:                                 DDD
DO_IUPRED2A: