O94993  SOX30_HUMAN

Gene name: SOX30   Description: Transcription factor SOX-30

Length: 753    GTS: 7.739e-07   GTS percentile: 0.129     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 5      gnomAD_SAV: 389      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MERARPEPPPQPRPLRPAPPPLPVEGTSFWAAAMEPPPSSPTLSAAASATLASSCGEAVASGLQPAVRRLLQVKPEQVLLLPQPQAQNEEAAASSAQARL 100
gnomAD_SAV:      T     SS  #          I          D SA  A   #  NV  #  RW  A C   LV P#  H Q QL  QVR   T  Q PS LFV  #R
Conservation:  3111111111111111111111111111111111111122203112211111111111111111111111111111111111111111111111112121
SS_PSIPRED:                                                HHHHHHHHHH   HHH    HHHHHHH     EEEE        HHHH  HHHHHH
SS_SPIDER3:                                  HH            HHHHHHH             HHHHHHH     HEEE              HHHHHH
SS_PSSPRED:                                             HHHHHHHHHH             HHHHHHHH     EEE       HHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDD    DDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                       DDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDD  D   DDD     DD DDDDDDDDDDDDDDDDDDDDDDD 

                       10        20        30        40        50        60        70        80        90     
AA:            LQFRPDLRLLQPPTASDGATSRPELHPVQPLALHVKAKKQKLGPSLDQSVGPRGAVETGPRASRVVKLEGPGPALGYFRGDEKGKLEAEEVMRDSMQGGA 200
gnomAD_SAV:    WRSSS  L  EQR      I WS# Q M RR  P   R        V  ARLQ TIK  A   WM      R  HS#LG EK SN  TG L  AAIE  G
Conservation:  1111212333212102120101212121232122121222201000101110011000011121110101001001002130111120031022010201
SS_PSIPRED:    HH  HHHHH                          HH                                                HHHHHHHHHHHH   
SS_SPIDER3:    HHH                                                                                  HHHHHHHHHH     
SS_PSSPRED:    HHH                                                                                    HHHHHHHH     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GKSPAAIREGVIKTEEPERLLEDCRLGAEPASNGLVHGSAEVILAPTSGAFGPHQQDLRIPLTLHTVPPGARIQFQGAPPSELIRLTKVPLTPVPTKMQS 300
gnomAD_SAV:     RNL T    M    KS     Y  V TKSPTS #AY  V IMV QP #     LH H L S  PRA S S  HLREGL     # S  #   MSIR  #
Conservation:  1111232243142240220002112101111113123121100012111223124242328342233232313432331224232242382133432365
SS_PSIPRED:        HHHHHH HH     HHHHH                               HHH               EE      HHHH             HHH
SS_SPIDER3:        HHHHHHH     HHHHHHH                  H             HH                         H                 
SS_PSSPRED:                                                                                                    HHH 
DO_DISOPRED3:  DDDD               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDD  DDDDDDDDDDDD DD    DDDD     DDDD D  DDDDDDDDDDD     DDDDDD  D       DDDDD    D D  D

                       10        20        30        40        50        60        70        80        90     
AA:            LLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREE 400
gnomAD_SAV:     M   I   AR IL        D L  A N N   Q         I     QR   E   T S         FQ    T        #  R   K   G 
Conservation:  3416456435345465478435652334444373857979999766959677325665683856566535684583666486849574862665356445
SS_PSIPRED:    H                                         HHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHH  HHHH HHHHHHHHHHHHHHHH
SS_SPIDER3:                                             HHHHHHHHH HHHHHHH  H   HHHHHHHHHHHHH  HHH   HHHHHHHHHHHHHHH
SS_PSSPRED:                                             HHHHHHHHHHHHHHHHH HHHHHHHHHHHH HHHHH  HHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                  D  D   D       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDD      D   DDDDDDDDDDDDDDDDDDDD                     DDDDD                   D   DDDDDDDD    DDD
DNA_BIND:                                          VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREE

                       10        20        30        40        50        60        70        80        90     
AA:            FPGWVYQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTVYPYRSPTYSVVIPSLQNPITHPVGETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDP 500
BenignSAV:                                 K                                                                       
gnomAD_SAV:        I R HA    QY PR  SI     K MF    A A   C# M   L     S  A LG      #   P T RN GRI   H TI GVS M   # 
Conservation:  6865464662346835462242423433442332363313532353263335333334234233324433463321423253245434233333532324
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDD         DDDD      DDD D   DDDD              DDD DDDDDDDDDDDDDDDDDDDDDD DDDDD    DDD D  DD  D
DNA_BIND:      FPGWV                                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            SLPVYPALPPQRFTGPSQTDTHQLHSEATHTVKQPTPVSLESANRISSSASTAHARFATSTIQPPREYSSVSPCPRSAPIPQASPIPHPHVYQPPPLGHP 600
PathogenicSAV:                 C                                                                                   
BenignSAV:                                            P                   L  P                                     
gnomAD_SAV:        C   LS #VI  FEA I#  RF    A Q      P# TS    #    R   VAL  PA S C  F L SGN  FA  T VANL    LRA  RL
Conservation:  2543352343414325343222122452313234236321322232333233121332232241536443341368323243323333544624233236
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 

                       10        20        30        40        50        60        70        80        90     
AA:            ATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPECLSYYEDRYPKHEGIFSTLNRDYSFRDYSSECTHSENSRSCENMNGTSYYNSH 700
gnomAD_SAV:    G Q RA  G Y R R      R LS    H  QS   C   L  I K    C  G* #LKV   I D  CY  V  NG AYN  FQI  DL V FCH  #
Conservation:  3154324433353463435643544453353243554444633544543545643452561345364444254233241241321223322311322544
SS_PSIPRED:                                                 HHHHH        HHHHHH       HHH                          
SS_SPIDER3:                                                  HHH          EEHHH                                    
SS_PSSPRED:                                                  HHHHHHH       EEE                                     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDD   D                                                    DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:     DDD                                                                       D     DDDD D DDDDDDDDDDD

                       10        20        30        40        50   
AA:            SHSGEENLNPVPQLDIGTLENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRDL 753
BenignSAV:                                                     M    
gnomAD_SAV:     # R  #   A    S   V     LI P    *K S  G        M  N 
Conservation:  51323223243324522244224322242432241454665545452767537
SS_PSIPRED:                   HHHHHHH           EEEE     HHHHHHHHHH 
SS_SPIDER3:                   HHHHHH            EEEEE    HHHHHHHHH  
SS_PSSPRED:                   HHHHHHH          EEEEE     HHHHHHHHHH 
DO_DISOPRED3:  D                         DD  DDDDDDDDDDDDDDDDDDBBBBB
DO_SPOTD:      DDDDDD                                               
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD