O95025  SEM3D_HUMAN

Gene name: SEMA3D   Description: Semaphorin-3D

Length: 777    GTS: 2.092e-06   GTS percentile: 0.686     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 2      gnomAD_SAV: 376      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MNANKDERLKARSQDFHLFPALMMLSMTMLFLPVTGTLKQNIPRLKLTYKDLLLSNSCIPFLGSSEGLDFQTLLLDEERGRLLLGAKDHIFLLSLVDLNK 100
gnomAD_SAV:        TV K    R       #     #  SIHT    SE T T   V    W F S  TT    P RR  #I  VNV SD Q F   V V  HG LN S 
Conservation:  2222222222222220222111113121100220101032223332412346324342225152334314353458575427359457454364424543
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                
SS_PSIPRED:          HHHH    HHHHHHHHHHHHHHHHHHHHH         EEEEHHHHH    EE          EEEEEEE    EEEEEEHHEEEEEE      
SS_SPIDER3:          HHHHH   HH HHHHHHHHHHHHHHHHH          EEEEHHHHHH   E E E       EEEEEE     EEEEEE EEEEEE       
SS_PSSPRED:                   HHHHHHHHHHHHHHHH             EE  HHHHHHH              EEEE        EEEHHH EEEEE       
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                               
DO_IUPRED2A:      DD                                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            NFKKIYWPAAKERVELCKLAGKDANTECANFIRVLQPYNKTHIYVCGTGAFHPICGYIDLGVYKEDIIFKLDTHNLESGRLKCPFDPQQPFASVMTDEYL 200
gnomAD_SAV:    D     *  T VQ G           A EH   I    DEI    G     R T V  E    R #V#  I   S K D     LNR  AV   K  KSF
Conservation:  2123519454124252723687310265456665632592683849999894828454433022422263521102559646697892435574535246
SS_PSIPRED:       EE     HHHHHHHHH           EEEEEEE     EEE        EEEEEE      EEEEE                     EEEEE    
SS_SPIDER3:      EEEE    HHHHHHHHH          EEEEEE E   EEEEE        EEEEEEE       EEE                     EEEEEE   
SS_PSSPRED:              HHHHHHHHHH          EEEEE      EEEE          EEEE          E                      EEEE    
DO_DISOPRED3:                                                                              D      D                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                      C          C                 C        C                                             
CARBOHYD:                                            N                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            YSGTASDFLGKDTAFTRSLGPTHDHHYIRTDISEHYWLNGAKFIGTFFIPDTYNPDDDKIYFFFRESSQEGSTSDKTILSRVGRVCKNDVGGQRSLINKW 300
gnomAD_SAV:     C AVC #  R IT  Q  E S GN CT   VLDY* I       AS L  I   Y     VL #     DN  N  F FQ * I    G   H P    
Conservation:  7696568979784554978922224435686344338544467432324455352576745565573415522246243576566767929947965588
SS_PSIPRED:       HHHHH     HHH                  HHHH    EEEEEE          EEEEEEEEEEE        EEEEEEEE          EE   
SS_SPIDER3:      HHHHHH     HEE           EE     HHHH    EEEEEEE         EEEEEEEEE         EEEEEEEEE         EEE   
SS_PSSPRED:      HHHH      HHH                  HHHH     EEEEEE          EEEEEEEEE          EEE   EE        EEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                                           C              

                       10        20        30        40        50        60        70        80        90     
AA:            TTFLKARLICSIPGSDGADTYFDELQDIYLLPTRDERNPVVYGVFTTTSSIFKGSAVCVYSMADIRAVFNGPYAHKESADHRWVQYDGRIPYPRPGTCPS 400
gnomAD_SAV:    M       L       RG A#    * M S #R H G T A  G AII PV N#C   LH V           VR   VHQS  KD E     W DAY R
Conservation:  5868745549566515935949669764544325825592766584656458468859474435584384744564655443953533548657775998
SS_PSIPRED:        EEEE                EEEEEEE        EEEEEEE        EEEEE  HHHHHHHH              EEE              
SS_SPIDER3:          EEEEEE       EEH EEEEEEEE        EEEEEEEE    E EEEEEEE HHHHHHHH              EE               
SS_PSSPRED:     HHHHHHHH            HHHHEEEEE         EEEEEEE       EEEEEEE HHHHHHHHH             EEE              
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:               C                                               C                                       C  

                       10        20        30        40        50        60        70        80        90     
AA:            KTYDPLIKSTRDFPDDVISFIKRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVVDHVIAEDGQYDVMFLGTDIGTVLKVVSISKEKWNMEEVVLEELQIF 500
gnomAD_SAV:      C LM    Q       R   #QT ICM#I  L E  K ETNS V    H M N IV D A  N       T        V  *N   KA   Q    L
Conservation:  6777524279667797963847198494445373233844345344536745589481949949465858882766785645444261387668774367
SS_PSIPRED:                  HHHHHHHHH              EEEEE     EEEEEEEEEEE      EEEEEE   EEEEEEEEE       EEEEEEEEHHH
SS_SPIDER3:                  HHHHHHHHH               EEEEE     EEEEEEEEEE     EEEEEE     EEEEEEE         EEEEEEHEE 
SS_PSSPRED:                   HHHHHHHHHHH            EEEE     EEEEEEEEEEE     EEEEEEE    EEEEEEEE       HHHHHHHHH  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRCDTYGKACADCCLARDPYCAWDGNACSRYAPTSKRRARRQDVKYGDPITQCWDIEDSISHETADEKV 600
PathogenicSAV:                                                                                S                    
gnomAD_SAV:     Y  VTF#I M       C # QGR  RFFSD  N  R #*T       LS         Q      S TGC #  H N     * VK  V  D   G  
Conservation:  2152272453462876666476016545546489248834966999989989899923965937448955586877486632595623411110023363
SS_PSIPRED:         EEEEEE     EEEEE    EEEEE HH        HHHHHH             EE         EEEHHH  HHHH               EE
SS_SPIDER3:         EEEEEEE    EEEEE   EEEEEE  H   H HHHHHEEEE           EEEE         EE       HHH              EEE
SS_PSSPRED:       HHHHHHH       EE       EEE         HHHHHHHHH                                                    E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                           D                           
DISULFID:                                       C                 C                                                

                       10        20        30        40        50        60        70        80        90     
AA:            IFGIEFNSTFLECIPKSQQATIKWYIQRSGDEHREELKPDERIIKTEYGLLIRSLQKKDSGMYYCKAQEHTFIHTIVKLTLNVIENEQMENTQRAEHEEG 700
BenignSAV:                   T                                                                                     
gnomAD_SAV:    N  T   T      T   K   T  M    GK Q#K   Y SN  K      G F   Y E##H      #    VM*V F  #   RTG  H  D    
Conservation:  4685625657777264654615194342123323275314543316249786927121848182816466483546345273662123431124211110
SS_PSIPRED:    EEEE    EEE         EEEEEE                EEE   EEEEE   HHH EEEEEEEEE   EEEEEEEEEEEE HHHH           
SS_SPIDER3:    EEE     EEEEE      EEEEEEE               EEEEE  EEEEE   H H EEEEEEEEE  EEEEEEEEEEEEE  H H HHHH      
SS_PSSPRED:    EEEE    EEE      HHHEEEEEE                EEEE   EEEEE  HHH   EEEEEEEE   EEEEEEEEEEE                
DO_DISOPRED3:                                                                                          DDDDDDDDDDDD
DO_SPOTD:                                                                                            DDDDDDDDDDDDDD
DO_IUPRED2A:                                      DDDD                                                DDDDDDDDDDDDD
DISULFID:                                                                      C                                   
CARBOHYD:            N                                                                                             

                       10        20        30        40        50        60        70       
AA:            KVKDLLAESRLRYKDYIQILSSPNFSLDQYCEQMWHREKRRQRNKGGPKWKHMQEMKKKRNRRHHRDLDELPRAVAT 777
BenignSAV:     Q                                                                            
gnomAD_SAV:    QL  R    Q  *  CVK    # VGP    KHT D KNQ   K ED    YI  I Q Q *T   # # FLG   M
Conservation:  01121122242575554444427124555574247344743232223299824572674988955120121221122
SS_PSIPRED:                HHHHHHHH      HHHHHHHHHH HHHHH       HHHHHH                      
SS_SPIDER3:       HHH    H HHHHHHHH      HHHHHHH     H           HHHHHH                 HHHH
SS_PSSPRED:                HHHHHHHH      HHHHHHHHHH  HHH            HHH                     
DO_DISOPRED3:  DDDDDDDD                         BBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBDDDDDDDDDDD
DO_SPOTD:      DDDDDDD                             DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DD                                 DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  
DISULFID:                                    C                                              
CARBOHYD:                             N