O95602  RPA1_HUMAN

Gene name: POLR1A   Description: DNA-directed RNA polymerase I subunit RPA1

Length: 1720    GTS: 1.615e-06   GTS percentile: 0.499     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 3      BenignSAV: 15      gnomAD_SAV: 763      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADSKEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLL 100
gnomAD_SAV:    I# Y STSSQ   A   RL   K  R S     MK QCP TQV   # S C     LS  EDL  I MRH G        T  S        L#      
Conservation:  7010221544541234432322223366858166642459349544146968865982526858265143622656678656859287794776885554
SS_PSIPRED:              EEEEEEEE   HHHHHHH  EEEE  HH                                                   HHHHHHHHHHH
SS_SPIDER3:               E EEEEE   HHHHHHH  EEE  HHHE     EE      H         E                 E        HHHHHHHHHHH
SS_PSSPRED:             HHHEEEEEE   HHHHHHHH EEE                                                     E  HHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDD  DD     D  D                                DDDDDDDDDDD  D DDDDDDDDDDDDDDD                 
DO_SPOTD:      DDDDDD                                                                                              
DO_IUPRED2A:                                                                                                       
METAL:                                                                        C  C      C  H                       

                       10        20        30        40        50        60        70        80        90     
AA:            RGSCLNCHMLTCPRAVIHLLLCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREELEQYTTEIVQNNLLGSQGAHVKNVCESKSKLIALFWKAHM 200
BenignSAV:                                                      A       P                                          
gnomAD_SAV:    Q C     V   SQ M           D##T KTI K   V  G    #HN   F VW    #HS    HD   E # TRE  AR I  R   V    RV
Conservation:  8868519438594843578833894563275423643461263224524223440554227203311442110011111057455316325431996255
SS_PSIPRED:    HH     HHH   HHHHHHHHHHH      HHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHH          HHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHHHHHH H    HHHHHHHHHHHHH     HHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHH        E   HHHHHHHHHHHHHHHH 
SS_PSSPRED:    HHHHH        HHHHHHHHHHHH     HHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHH           HHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                             DDDDDDDDDDDDDD                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                       D  DDD                                          

                       10        20        30        40        50        60        70        80        90     
AA:            NAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDSEPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLD 300
gnomAD_SAV:       H  R  IRQ I     S R  VM A T YGS VR       V   RM  Q   AS G#HK#VF   #S        SA    GV K  LS R    E
Conservation:  1554972932252269699959776414211001211211112125311244846797236555302683578889228836310010221324349984
SS_PSIPRED:                  EEE    EEEEEE HHH               HHH        HHHHHHHHHHHHH HHHHHHHH                   EE
SS_SPIDER3:                 EEEE      EEE  HHHH             HHHH        HHHHHHHHHHHHH HHHHHHHH                   EE
SS_PSSPRED:    H                                             HHH        HHHHHHHHHHHHHHHHHHHHHHH                  E 
DO_DISOPRED3:                                       DDDDDDDDDDDDD                                                  
DO_SPOTD:                                       DDDDDDDDDDDDDDDDD                                                  
DO_IUPRED2A:                                        DD DDDD                                                        
MODRES_P:                                             S                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTTDEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNI 400
BenignSAV:                                                     E              E F                             N    
gnomAD_SAV:         S  C   GC         HA      #    P L   VS G  E    K     AN  E C #GV QP FG  T   VT   #    H  NRISV
Conservation:  2548896879966648845568556564655566203568864456242002021110001211100002835472142925237796639768966699
SS_PSIPRED:                HH        HHHHHHHHHHHHHHHHHHHHHHHHHH    HH       HHHHHHHHH HHHHH     HHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    EE                    HHHHHHHHHHHHHHHHHHHHHHHHH     H H      HHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHH
SS_PSSPRED:                          HHHHHHHHHHHHHHHHHHHHHHHHHHHH            HHH    HHHHH        HHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                               DDDDDDDDDDDDDDDDDDDDDDDDDDDD                           
DO_SPOTD:                                                         DDDDDDDDDDDDDDDDD                                
DO_IUPRED2A:                 D                                     DDDDDDD  D                                      

                       10        20        30        40        50        60        70        80        90     
AA:            VFDSEMDKLMMDKYPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQELRQAVINGPNVHPGASMVINE 500
gnomAD_SAV:       G VGRP V E            V L           T    V     F  S     V C       H      I KF  V   S  M   # # MY 
Conservation:  7999769654179799769476865999969888988868888999998982657665669889899999899699669898985999229999557759
SS_PSIPRED:    HH     HHHH     HHHHH                                      HHHHHH          HHHHHHHHHHH         EEE  
SS_SPIDER3:    HHH    H        HHHHHH      H      E  E    E          H    HHHHHH     E     HHHHHHHHH          EEE  
SS_PSSPRED:    HE              HHHHHHHHH  HHHH    HHHHHH  E               HHHHHH        HHHHHHHHHHHHH         EEE  
DO_DISOPRED3:             DD  DD           DBBBDDDDDDDDDDDDDDD                                                     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                 DDDD  

                       10        20        30        40        50        60        70        80        90     
AA:            DGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ 600
PathogenicSAV:                                                                                             Q       
BenignSAV:        H                                                                                                
gnomAD_SAV:     SNH    TMYTIRQKTM     # VM TL  *R  N YQ   SR VV   *            HTH    D   W Y  S                   
Conservation:  9846859832406885858969889437232233294959965595767669799997997999377797577999797769997779779999979799
SS_PSIPRED:       EEE     HHHHHHHHHHH             EEEEEE     EEEEE        HHH EEEEE     EEEEE                 EE   
SS_SPIDER3:       EEE H   HHHHHHHHHH              EEEEEE     EEEE           E EEEEE     EEEEEEE             E      
SS_PSSPRED:       EEE     HHHHHHHHHHH              EEEE  E  EEEEEE       HHHHHHHHHH   HHHHHHH                      
DO_DISOPRED3:                                                      DDDDDDDDDDDDDD                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:           DDD         DDDDDDD      DDD                       DDDDD                                    
METAL:                                                                                                D D D        

                       10        20        30        40        50        60        70        80        90     
AA:            SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRGLTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDH 700
BenignSAV:                                                        Q                    A                           
gnomAD_SAV:    N  VQ K HI   A     GA      V             NIWVS LIW # #*   *  KNRM CM F  A T  L L      A  M          
Conservation:  5996999732775745999999796997999999777963993946674646946767799696195774439663792179999965777648658331
SS_PSIPRED:     HHHHHHHHHHH    EEE         HHH HH HHHHHHH       HHHHHHHHHHH              EE       HHHHHHHHH        
SS_SPIDER3:     HHHHHHHHHHH    EEEE     E EHHH  EEEEEEEEEE      HHHHHHHHHHH       E      EE       HHHHHHHH         
SS_PSSPRED:     HHHHHHHHHHHH   EEE       HHHHHHHHHHHHHE         HHHHHHHHHH        EE     E        HHHHHHHHHH       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            IPLNLSGKAKITGKAWVKETPRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTCLARLFTAYLQLYRGFTLGVE 800
gnomAD_SAV:    S       T   A     K SQFIR     PK  F  #       #RG   S     S S        CA KITS           G ML FG     MK
Conservation:  1698928578722769442132204331541877949654297655686997767764669997747577733663564576677755967657797669
SS_PSIPRED:         EE                            EEEEE  EEEEEEEE  EE      HHHHHHHHH HHHHHHHHHHHHHHHHHHHHH         
SS_SPIDER3:       E                               EEEEE  EEEEEEEEHHHEE     EEEHHEHHH HHHHHHHHHHHHHHHHHHHHHH  EE  H 
SS_PSSPRED:                                       EEEEE   EE EE            HHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHH  EEEEE
DO_DISOPRED3:                  DDDDDDDDDDDDD                                                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYDEVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS 900
BenignSAV:                   V                                                                                     
gnomAD_SAV:          MEA R  CV   YIPWR        KV  DT F  GL   HV RP#E HKA  V E  Y     R   D   V  S V #   L  N  I   L
Conservation:  9899521970391166228212923665376484223213534359778992388554446868787478236837996588388842984869668888
SS_PSIPRED:         HHHHHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHH 
SS_SPIDER3:     EEE HHHHHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHH 
SS_PSSPRED:    EEE  HHHHHHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHH
DO_DISOPRED3:                                        D DDDDDDDD                                            DDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                  D   D

                       10        20        30        40        50        60        70        80        90     
AA:            GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIKPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLV 1000
gnomAD_SAV:            M   WY   *     Q  Q #V    P    LS         I      S RLS      V  *           H       VV  V    
Conservation:  9889859866779999997999967967977976779755643393799974677799937554657656756566656664676656567679777796
SS_PSIPRED:        HHHHHHHHHHHH  HHH                            EE            EEHHHH          HHH   HHHHHHHHHHH   E
SS_SPIDER3:         HHHHHHHHH     H                             E           HHHHHHHH     H H         HHHHHHHHHH   E
SS_PSSPRED:         HHHHHHHHHHH  EE                             EE            EEE        E         HHHHHHHHHHHHHH E
DO_DISOPRED3:  DDDDDDDDDDD D                                                                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   D                                                                                                   
REGION:                                                                    PPEFFFHCMAGRE                           

                       10        20        30        40        50        60        70        80        90     
AA:            VQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHPNTLLRRGAFLSYSQKIQEAV 1100
gnomAD_SAV:    M   R  C   S          DV V #I L  LR L    GS K         KAFC S   NT   L  T#   N   S   #  T  NH   N#  G
Conservation:  6677667777777666767797776666566763366676237456724432635673524411601623554794275202138186993756643122
SS_PSIPRED:    EEEE  EE     EEEEEE                        HHHHHHH  HHHHH    HHHHHHHHHHHHHHHH    HHH       HHHHHHHHH
SS_SPIDER3:    EEEE  EE     EEEEEE       HHHH             HHHHHHH  HHHHH    HHHHHHHHHHHHHHHH     HH       HHHHHHHHH
SS_PSSPRED:    EEE   EE     EEEEE                      HHHHHHHHHHH HHHHHHH  HHHHHHHHHHHHHHHHH    HHHH   HHHHHHHHHHH
DO_DISOPRED3:                                                        DDDDDDDDDDD  D      D    DD                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAAACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKW 1200
BenignSAV:                                             T                                                           
gnomAD_SAV:     G    N  HS H #    I K#LN  #D CQ     # TVY  S  #  H    S    D     I N   #C S   E * N A F N M I  H   
Conservation:  5110101101257211436532291454313518606651178674543369843758788472114327202321101010011023136851973599
SS_PSIPRED:    HHH HHH       HHHHHHHHHHHH  HHHHHHHHHHHH               HH   HHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHH
SS_SPIDER3:    HH              HHHHHHHHHHHHHHHHHHHHHHHH    H HHH     HHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHH
SS_PSSPRED:    HHHHH         HHHHHHHHHHHHHHHHHHHHHHHHHH       EE      EE   HHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                               D                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:        DDDDDDDDD D                   D D                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQ 1300
PathogenicSAV:                                                                                                   F 
gnomAD_SAV:     C                                                TIT  IT      VRMLAFD    Q       R  AWM FR M    NI 
Conservation:  9579958989999899999999899999999999999899999999877778658556878868578833445826656194624467473677545342
SS_PSIPRED:    HHH       HHHHHH                    HHH       HHHHHHHHH       EEEEEE  HHHHHHHHHHHHHH  EEEHHHHHHEEEEE
SS_SPIDER3:    HHH       HEEHHH     HHHHHHHHHH H       E      HHHHHHHHH      EEEEE    HHHHHHHHHHHHHH  EEHHHH EEEEEE
SS_PSSPRED:    HHHH    HHHHHHHH                        EE  HHHHHHHHHHH       EEEEE     HHHHHHHHHHHHHHHHHHHHHHHEEEEE
DO_DISOPRED3:                    DDDDDDDDDDDD                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ESFCMEEKQNKFQVYQLRFQFLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNAGELGRSRGEQEGDEEEEGHI 1400
gnomAD_SAV:    KF  V   H  L     LLH  SD   H  Q  # D N C   R L # MV F E NK   LG GYISIQT   W    TV  EK#W  # S        
Conservation:  8453211122225152528289533292476253812782658258532445376753273444218346574129140222010110212113333113
SS_PSIPRED:    EEEE      EEEEEEEEE    HHHH  HH   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      HHH  HHH  HHH         HHH    
SS_SPIDER3:    EEEEE     EEEEEEEEE    HHHH  HH   HHHHHHHHHH  HHHHHHHHHHHHHHHHH H    HHHHH  H H                     
SS_PSSPRED:    EE        EEEEEEEEE    HHHHHHHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                   
DO_DISOPRED3:                                                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                                                           S              

                       10        20        30        40        50        60        70        80        90     
AA:            VDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEENDDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMER 1500
BenignSAV:                                         D                                 G                   G         
gnomAD_SAV:           R   SA   #   RQ       K  #   DK K N N  KKQ L G   Q     V DL  D G ETFI TF M  QQ IR  GSRRR TV C
Conservation:  4432237884775537362574775454533321121232332111121000020010134323001020212112000112201003333301101022
SS_PSIPRED:     HHHHH     HHHHHHHHHHHHH     HHHHHHH     HHHHHHH       HH  HHHHHH            HH               HHHHHH
SS_SPIDER3:       H H        HHHHHHHHH      HHHHHH        H   H       H  HHHH                 H              HHHHHH
SS_PSSPRED:                HHHHHHHHHHH                                      HHH                               HHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            RVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGITRCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRL 1600
PathogenicSAV:                                                              F                                      
gnomAD_SAV:    QA   # MYL MNN   NN D     LRM R # NNI    T  LYSV   I#C     AQ   # A SH KKE     S    VSD  # T I N #C 
Conservation:  7532841231264191691213999652514752533594355524554346634659556979463231142333393899894265537345565358
SS_PSIPRED:    HHHHHHHH HHH EEEEE     EEEEEEEE        HHHHHHHH    EEEE     EEEEE         EEEEEE    HHHHHH         E
SS_SPIDER3:    HHHHHHHH    EEEEEE    EEEEEEEE       EEHHHHHHHHH   EEEE   E EEEEEE       EEEEEE     HHHHH         E 
SS_PSSPRED:    HHHHHHHH               EEEEEEEE      HHHHHHHHHHHHHHHEEEE    EEEE          EEEEE     HHHHHHHH E     E
DO_DISOPRED3:  DDDDD                                                                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDD                                                           D        DDDD                       

                       10        20        30        40        50        60        70        80        90     
AA:            YSNDIHAIANTYGIEAALRVIEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQATMLGSHDELRSPSACL 1700
BenignSAV:            M                                                                                            
gnomAD_SAV:       N  #VS M     E W   E  R    M  VTAN H       DI  K           #              I     SSV E R D K      
Conservation:  9697795692489895965566798779996996365665664657668459286645647629568968988998876989594448338351598964
SS_PSIPRED:    E   HHHHHHHHHHHHHHHHHHHHHHHHHHHH  EE HHHHHHHHHHH    EEE            HHHH  HHHHHHHHHHHHH         HHH E
SS_SPIDER3:        HHHHHHHH HHHHHHHHHHHHHHHHHH    E HHHHHHHHHH     EE   E E       HHHH  HHHHHHHHHHHHH          HHEE
SS_PSSPRED:      HHHHHHHHHHHHHHHHHHHHHHHHHHHHH   EE HHHHHHHHHH      EE            HHH   HHHHHHHHHHHHHH            E
DO_DISOPRED3:                                                                DDDD DDDDDDDDD           D            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20
AA:            VVGKVVRGGTGLFELKQPLR 1720
gnomAD_SAV:    MA   I VR   LK  H  S
Conservation:  56755668946586887952
SS_PSIPRED:    E            EEE    
SS_SPIDER3:    EE           EE     
SS_PSSPRED:    EE           HHH    
DO_DISOPRED3:                      
DO_SPOTD:                         D
DO_IUPRED2A: