O95970  LGI1_HUMAN

Gene name: LGI1   Description: Leucine-rich glioma-inactivated protein 1

Length: 557    GTS: 8.685e-07   GTS percentile: 0.167     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 19      BenignSAV: 4      gnomAD_SAV: 159      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MESERSKRMGNACIPLKRIAYFLCLLSALLLTEGKKPAKPKCPAVCTCTKDNALCENARSIPRTVPPDVISLSFVRSGFTEISEGSFLFTPSLQLLLFTS 100
PathogenicSAV:                          R               #   R                                                      
gnomAD_SAV:    V         KS   V K  H  RFFPV F       G      M     #TV      C  CI   EI            LL      M L       L
Conservation:  1111111111111111111010000011000000110102222014232221101010001110130110012123222122111121113042443231
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                  
SS_PSIPRED:                   HHHHHHHHHHHHHHHH               EEE  EEE               EEEEEE     EE            EEE   
SS_SPIDER3:          H H      HHHHHHHHHHHHHHH                EEE  EEEE    EE        EEEEEEE EEEE             EEEEE 
SS_PSSPRED:                   HHHHHHHHHHHHHHHH               EE   EEEE             EEEEEEE     EE            EEE   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                  
DO_SPOTD:      DDDDDDDDDDDD      DDDDDDD                                                                           
DO_IUPRED2A:   DD                                                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            NSFDVISDDAFIGLPHLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDIYC 200
PathogenicSAV:          D           KK            W        R        P                                             R
gnomAD_SAV:    D  N   G V    L        SK      TR  Q        #               C  Y A         T           F Y S  I     
Conservation:  3121120322404523446666537241244225646863546577457353175535702434622377666060739335773184115854522317
SS_PSIPRED:        EE            EEE       EE HHH        EEE                     EEE           HHHHHHHHHH        EE
SS_SPIDER3:     EEEEE            EEEE   E EE   HH        EEE      EE    H        EEEE          HHHHHHHHH         EE
SS_PSSPRED:      E EE             EE          HHHHH     HHHH           HHH        EE           HHHHHHHHHHH         
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                                 N        

                       10        20        30        40        50        60        70        80        90     
AA:            EGPPEYKKRKINSLSSKDFDCIITEFAKSQDLPYQSLSIDTFSYLNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYDNITGTSTVVCKPIVIETQLYVIVA 300
PathogenicSAV:                                P                                                                 T  
BenignSAV:                                                  K                        I                             
gnomAD_SAV:    A    C  HN  #F L   E  V   V           T N    K      T       L    N M  N W   D A  P      L V    C  A 
Conservation:  1370022311412312112273244721222313354645450311414454546224182543885533065143161527352964344121455644
SS_PSIPRED:       HHH     HH  HHH                      EEEE    EEEEE       EEEEE     EE          EEEE   EE  EEEEEEE
SS_SPIDER3:       HHH   E HH    H            E         EEE    EEEEEE     E EEEEE      EE H       EEEE  EE   EEEEEEE
SS_PSSPRED:       HHH                                   E     EEEEEE       EEEEE                 EEEEE       EEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                  N                       

                       10        20        30        40        50        60        70        80        90     
AA:            QLFGGSHIYKRDSFANKFIKIQDIEILKIRKPNDIETFKIENNWYFVVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEIVRTPQTLRTPHLI 400
PathogenicSAV:                  C                   S                                            A                 
BenignSAV:                                              K                                                          
gnomAD_SAV:      LAD  V  Q R  T           R Q  S     NT T     F     S L  V #       FR    # H              H F  T   
Conservation:  6963583745440122493449356113559985563715323168446547658156584742287633636819589674544422111111253266
SS_PSIPRED:          EEEE       EEEEEE           EEEEEE   EEEEEE        EEEEE    EE      HHH      EEE           EEE
SS_SPIDER3:          EEEE       EEE  E   HH      EEEEEE  EEEEEEE       EEEEEE    EE   HEHHHH     HHHHH          EEE
SS_PSSPRED:            E           EEE             EEEE   EEEEEE        EEEEE         HHHHHH      EEE           EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LSSSSQRPVIYQWNKATQLFTNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIGDSKVMKWGGSSFQDIQRMPSRGSMVFQPLQINNYQYAILGSDYSFTQ 500
PathogenicSAV:                                E                                        LQ                          
BenignSAV:                                                                                               V         
gnomAD_SAV:     C    H      D T     K  E   V V  T    LM EE# V         # L    FL R    V     V     R   H   V         
Conservation:  5594782845658442122820213422227533775812212156554366999644392211615381386686544394031021443566554563
SS_PSIPRED:    EE      EEEEEE    EEEEHH     HHEEEEEEEEE  EEEEEEE EE     EE      EEEEE      EEEEEEEE  EEEEEE       E
SS_SPIDER3:    EE      EEEEEE    EEEE       HHEEEEEEEEEE  EEEEEEEEE     EEE     EEEEE      EEE EEEE  EEEEEE E   EEE
SS_PSSPRED:    EE      EEEEE      EE          EEEEEEEEE  EEEEEEE               EEEEE                 EEEEEE       E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                           N                                                                              

                       10        20        30        40        50       
AA:            VYNWDAEKAKFVKFQELNVQAPRSFTHVSINKRNFLFASSFKGNTQIYKHVIVDLSA 557
gnomAD_SAV:        N#   *        A         FT  C                 AT    T
Conservation:  551640210050144422334874711322220133424544525133251145341
SS_PSIPRED:    EEEEEHHH EEEEEEEE       EEEEEE  EEEEEEE      EEEEEEEEE   
SS_SPIDER3:    EEEEE    EEEEEHH        EEEEEE  EEEEEEE     EEEEEEEEEE   
SS_PSSPRED:    EEE    H HHH HHH          EEE    EEEEEE      EEEEEEEEE   
DO_DISOPRED3:                                                           
DO_SPOTD:                                                               
DO_IUPRED2A: