P01009  A1AT_HUMAN

Gene name: SERPINA1   Description: Alpha-1-antitrypsin

Length: 418    GTS: 1.812e-06   GTS percentile: 0.584     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 19      BenignSAV: 63      gnomAD_SAV: 250      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MPSSVSWGILLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEI 100
PathogenicSAV: V                                                       L                  S     P                  
BenignSAV:                              A   V   N  A                    T R  L   N F              T       I      D 
gnomAD_SAV:     SF ILC#N  M V RR I    #K#S  N   Q V FNR  EQL#     #S P LSCG *CRPVQ F R  NL    N TRTS  # V I  NA N  
Conservation:  0000000000001133021200000000000001000000010000001211111287418941420010124655573573345446426612162177
STMI:          SSSSSSSSSSSSSSSSSSSSSSSS                                                                            
SS_PSIPRED:       HHHHHHHHHHHHHHHH HH                      HHHHHH HHHHHHHHHHHHHHHHH     EEE HHHHHHHHHHHHH    HHHHHH
SS_SPIDER3:      HHHHHHHHHHHHHH H                          H HHHH HHHHHHHHHHHHHHHHH    EEEE HHHHHHHHHHH     HHHHHHH
SS_PSSPRED:       HHHHHHHHHHHHHHH                            HHHHHHHHHHHHHHHHHHHHHH     EEE HHHHHHHHHHHHH     HHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                        
DO_IUPRED2A:                              DDDDDDDDDDDDDDDDDDDD                                                     
MODRES_P:                                           S                                                              
CARBOHYD:                                                                           N                              

                       10        20        30        40        50        60        70        80        90     
AA:            LEGLNFNLTEIPEAQIHEGFQELLRTLNQPDSQLQLTTGNGLFLSEGLKLVDKFLEDVKKLYHSEAFTVNFGDTEEAKKQINDYVEKGTQGKIVDLVKEL 200
BenignSAV:             M  T      V     H                               N              #       E                    
gnomAD_SAV:     K  D   M MLKV M  # R   C V   AG    S A   LFRK   PLG L KGF       D A K R  K V     N*MKTS    V  S ED 
Conservation:  2236153011111015412620431121011111261325376421121412183225312615333134513101711287266324625371336224
SS_PSIPRED:    HHHH        HHHHHHHHHHHHHHH       EE  HHHHHH       HHHHHHHHHHH    EE     HHHHHHHHHHHHHH     HHHHHHH 
SS_SPIDER3:    HH          HHHHHHHHHHHHHHH       EEEEEEEEEE     E HHHHHHHHHH   EEEE E   HHHHHHHHHHHHHHH   HHHHHHH  
SS_PSSPRED:    HHHH        HHHHHHHHHHHHHHH       EEE   EEE       HHHHHHHHHHHHH  EEE     HHHHHHHHHHHHHHH    HHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                 D                                                  D                  
CARBOHYD:            N                                                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            DRDTVFALVNYIFFKGKWERPFEVKDTEEEDFHVDQVTTVKVPMMKRLGMFNIQHCKKLSSWVLLMKYLGNATAIFFLPDEGKLQHLENELTHDIITKFL 300
PathogenicSAV:                C                                R                            P                      
BenignSAV:               H      C   L     K       RA     S ITC      R     F                   V       V    #    N  
gnomAD_SAV:     #  IY  L CV   C    H    Y K  E NEERAIAM*A VT H S#CYL   #   IC   T    D  SF   TVKR# *YPVH  IRN  N LR
Conservation:  1112144756454524071118110030120914322116263440101021221311425278141513312436787223351063216102160230
SS_PSIPRED:        EEEEEEEHH  EEE     HHH            EEE    EE  EEEEEEE    EEEEEEE    EEEEEEE     HHHHHHH  HHHHHHHH
SS_SPIDER3:        EEEEEEEEEEEEEE     H   EEE EEE   EEEEE     E EEEEEE     EEEEEEEE   EEEEEEE     HHHHHH   HHHHHHHH
SS_PSSPRED:     HHHHHHHHHHEEEEEEE                   EEEE    E      EEE      EEEEEE    EEEEEE     HHHHHHHHH HHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                            N                             

                       10        20        30        40        50        60        70        80        90     
AA:            ENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSKAVHKAVLTIDEKGTEAAGAMFLEAIPMSIPPEVKFNKPFVFLMIE 400
PathogenicSAV:                    P                                     R                                          
BenignSAV:       Q                              E   K    A          FR    T    #        D   KD      #K            D
gnomAD_SAV:     I N S SN  FS  TV  A     I    S   I        RF   PSM  F  L ETG AVNQTE K  RTT   TV IA  TKLR   R F   TG
Conservation:  1020000216268441513131621360154503452016382343000021420025341515271421222100001100000004052228442600
SS_PSIPRED:    HH   EEEEEE    EEE    HHHHHHH   HHH                EEEEEE EEEEEE           EEEEE      EEEE   EEEEEEE
SS_SPIDER3:       EEEEEEEE   EEEEEEE  HHHHHH   HHH                EE EEE EEEEEE     EEE EE EEE       EEEE   EEEEEEE
SS_PSSPRED:    HH    EEEEE    E      HHHHHHHH   E                  HHHHHHHHHHH    HHHH   HHHHHHH     EEEE   EEEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
PEPTIDE:                                                                                 MFLEAIPMSIPPEVKFNKPFVFLMIE
REGION:                                                                           GTEAAGAMFLEAIPMSIPPEVKFNK        
MODRES_P:                                                                                        S                 

                       10        
AA:            QNTKSPLFMGKVVNPTQK 418
PathogenicSAV:         T         
BenignSAV:       I               
gnomAD_SAV:      S# T  T      PLI
Conservation:  200113252544137000
SS_PSIPRED:          EEEEEE      
SS_SPIDER3:         EEEEEEE      
SS_PSSPRED:          EE          
DO_DISOPRED3:                  DD
DO_SPOTD:                     DDD
DO_IUPRED2A:            D        
PEPTIDE:       QNTKSPLFMGKVVNPTQK