P01130  LDLR_HUMAN

Gene name: LDLR   Description: Low-density lipoprotein receptor

Length: 860    GTS: 3.015e-06   GTS percentile: 0.904     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 629      BenignSAV: 107      gnomAD_SAV: 508      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGPWGWKLRWTVALLLAAAGTAVGDRCERNEFQCQDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSD 100
PathogenicSAV: #        R    H           #    C # E  #      #H  S     P #   R#           #  C  S#T#  #### E Y# K  #
BenignSAV:      R               V E                            R                                  S                
gnomAD_SAV:     R #      II F    VR S  N WK  K *      VF     ND SD       F  M S  I   R    R C  C     GK N E N EDS* 
Conservation:  1111111111011100000010010151121414134254301526530244143354112361145811137272322338540193773216715338
STMI:          SSSSSSSSSSSSSSSSSSSSS                                                                               
SS_PSIPRED:          EE     EEE              EEE          EE                           EE       EE   EE            
SS_SPIDER3:               H EEE               EE     EEEHHH E                          EEE     EE  HHHE            
SS_PSSPRED:         EEE     EEE                      EE   E                            EE        E   EE            
DO_DISOPRED3:  D                                                      D   D                                        
DO_SPOTD:      D                                                                                                   
DO_IUPRED2A:                                                                                                       
DISULFID:                                C      C    C      C     C          C    C      C      C      C     C     
CARBOHYD:                                                                                                      N   

                       10        20        30        40        50        60        70        80        90     
AA:            EQGCPPKTCSQDEFRCHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAF 200
PathogenicSAV: K  #    #      #  R #F   ###G H N# V# ##  #L   #R   # #  C #TL  G ##I  ## #V### L  #           T#   
BenignSAV:         S           Y     TGK    T              A     T       I                       H     M     N    L
gnomAD_SAV:    K#  LR MY R * H  GRR   Q      GW R  S* * #* AF   HP   *     N   *  # G  W*N L   RRH S IDL      H#WT 
Conservation:  8126114171113637146285300658815078176588118212371400728423085402738925078083878442181100110010118101
SS_PSIPRED:                 EE     EE   EE                      HHH       EE HHHEE                                 
SS_SPIDER3:                 EE     EEEHHHEE                      HH E     E EHHHEE                                H
SS_PSSPRED:                             E                           E                                              
DO_DISOPRED3:                                       D                                          DDDDBB              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:         C    C      C    C      C     C        C    C      C    C      C     C          C            C   
CARBOHYD:                                                             N                                            

                       10        20        30        40        50        60        70        80        90     
AA:            EFHCLSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMAR 300
PathogenicSAV:  S #VR K##   S##    ##N# C##  #    #    #    V #T   P##EP   #   C#D S#     #       # RCKGS   E #  TG
BenignSAV:                                            K            W   #K     V         S          Q               
gnomAD_SAV:    G YR  D   YFR C  AD G#    E# DGT    CS KS   ER    SRWER W*  F N# E ID I LK #D    L  YRSK  P  R   VTG
Conservation:  5428147386611939933078082998139112373256748158275252358621169191799049023218344109382577761233774202
SS_PSIPRED:    EEE     EE   EE                        EEE          EE                                     HHH      
SS_SPIDER3:    HEE     E E   EE                       EEE     E E HHEE                          EE     EE HHHH     
SS_PSSPRED:     EE     EE   EE                                                                            HHHH     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:         C    C      C     C        C    C      C    C      C     C        C     C       C    C      C    
CARBOHYD:                                                                             N                            

                       10        20        30        40        50        60        70        80        90     
AA:            DCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAY 400
PathogenicSAV: ## #CL##H T #  # #   IC ### #     #C #PW  #      # # A #G#  S  # # # #  # # # #  V P#      R#  D  # 
BenignSAV:              T                   K    S     RE            V K      R                          T     T   
gnomAD_SAV:      WN#    F GWW HK    KSS  YIYD    DHK  # ES  P   Q YKGMNG  E AIR R YM   S  N#P GK#   YLNM T* V A  T 
Conservation:  5727278662327216783025669871818664844838318619241128597689223439481948218566937117623640521854172363
SS_PSIPRED:                                 EE     EEE     EE                    EEEE   EEEEE    EEE       EE    EE
SS_SPIDER3:                            E  EEE     EEEE     EE     EEE            EEEE   EEEEE    EEE     EEEEE    E
SS_PSSPRED:                                EEE    EEE      EE                     EEE    EEEE                    EE
DO_DISOPRED3:         DDD                                                                                          
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:       C          C    C      C   C        C C           C     C     C   C        C C            C        

                       10        20        30        40        50        60        70        80        90     
AA:            LFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 500
PathogenicSAV: VSL#K# # #E# RH# K#  P#     # ###     Y T# PE #K  #  N H             GK   V# EP# ##    #C#N#   VP   
BenignSAV:          Q     I        G                                     G       II  G V    R       G           F  
gnomAD_SAV:    F    #QKI  LMR W K*NR MS#   M TVEK AV  T  R E# *  M#TA #    SI  N #I   Y E  NRV  N      *  HC    IC 
Conservation:  8498555779455484369215632763457883542222579692345596640531413131414563225128567849977357988951233787
SS_PSIPRED:    EEEE   EEEEEE     EEEEE     EEEEEEE    EEEEEE    EEEEEE          EEEEE       EEEEE     EEEEE    EEEE
SS_SPIDER3:    EEEE   EEEEEE      EEE    E EEEEEEE    EEEEEE    EEEEEEE      E EEEEEEE      EEEEE    EEEEEE    EEEE
SS_PSSPRED:    EEEE HHHHHHE        HHH     EEEEEEE     EEEE       EEEE         EEEEEE        EEEE     EEEE     EEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 600
PathogenicSAV: #   D # E S       SG  MGV#  D RNRN#G   T S  ## K#     P    F  ##A  ##    CFS#A#PN## #      E  L   W 
BenignSAV:                 K                        S                                 N                         LS 
gnomAD_SAV:    V NE M KQM  K  SCR  V#LM#SIRR K *  L N TN   E   D Y  L         HST    FR L# SA F  Y#V R H SRC QRN  D
Conservation:  6321905775531206158647548803575796779036583749899444137723372676856873223787947673845555332921842641
SS_PSIPRED:    EE      EEEE       EEEEE     EEEEEE      EEEEE      EEEE        EEEEE     EEEE     EEEEEE      EEEEE
SS_SPIDER3:    E     EEEEEE      EEEEEEE    EEEEEE     EEEEEEE     EEEEEE    E EEEEE    EEEEEE    EEEEEE      EEEEE
SS_PSSPRED:    EE      EEEE        EEEE     EEEEE         EE       EEEEE        EE       EEEEE     EEEEE     EEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                    N                                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            DEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPD 700
PathogenicSAV: #   PDR# #F   V  G##R#    #TC D # I#  #  S   # ## #    Q P #A #   #        ##   #F  #E       V #P# E
BenignSAV:     G #     L  S                                       V      N    M                                    
gnomAD_SAV:    # R  D   C VI     L   V  KT VR  C  S N #     I A K##A  N          # K   N SR#   * LTL F S#L     T LN
Conservation:  3101313745654585567968302246285472871431145138027354363734386051679111010454935798687233015565774987
SS_PSIPRED:             EEEEE  EEEEEE     EEEE        EEEE        EEEE                         EEE                 
SS_SPIDER3:             EEEEE  EEEEE    HHHHHHHHHH    EEEEE      EEEEE                      E  EEE           EEE   
SS_PSSPRED:             EEEEE  EEEEE   HHHHHHH       HHHHHHH      EEEEE                                     EE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                        C         C   C              C C  
CARBOHYD:                                                              N                                           

                       10        20        30        40        50        60        70        80        90     
AA:            GMLLARDMRSCLTEAEAAVATQETSTVRLKVSSTAVRTQHTTTRPVPDTSRLPGATPGLTTVEIVTMSHQALGDVAGRGNEKKPSSVRALSIVLPIVLLV 800
PathogenicSAV:       #   #  #                                       W                                          M R 
BenignSAV:         S             L    I            G    #           R        D G                      S   F       I
gnomAD_SAV:    SI  PGN#KG F *T  V   RGI II I  TCI IM K  I *   N  Q  W # VP M DTGI# Q#VP NI #I  D Q  GMKS FT F #M FF
Conservation:  2207415352821210210120111000200101100100000001100000000011111001000210101101011011021111242324633332
STMI:                                                                                                  MMMMMMMMMMMM
SS_PSIPRED:      EE     EEE     HHEE    EEEEEE                             EEEEEEE       EE         EEEEE   HHHHHHH
SS_SPIDER3:      EE     EEEE    EEEE   EEEEE                                EEEEEE       EE         EEEHHHH  HHHHHH
SS_PSSPRED:                  HHHHHHH     EEEEE                             EEEEEEE                  EEEEE      EEEE
DO_DISOPRED3:                                                                         D                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                 DDDDD DDDDDDDDDDDDDDDDDD                    DDDDD                     
MODRES_P:                             T                                                                            
DISULFID:                C                                                                                         

                       10        20        30        40        50        60
AA:            FLCLGVFLLWKNWRLKNINSINFDNPVYQKTTEDEVHICHNQDGYSYPSRQMVSLEDDVA 860
PathogenicSAV:   R R  V       Q        ##F#               S                
BenignSAV:          D                    I                                 
gnomAD_SAV:         F       Q          K I     DHAIR  RK    R  L RI  #K  MV
Conservation:  332253224662542443335332473555544544452221475157234252322311
STMI:          MMMMMMMMMM                                                  
SS_PSIPRED:    HHHHHHHHHEEE     EEEEE    EEE       EEEE     EE    EEEE     
SS_SPIDER3:    HHHHHHEEEEEE     EEEEE    EEE E   EEEEEE     EEE EEEEE      
SS_PSSPRED:    EEE  EEEEEEE     EEEEE              EEE            EE       
DO_DISOPRED3:                                                             D
DO_SPOTD:                                                               DDD
DO_IUPRED2A:                                    D                          
MOTIF:                               FDNPVY