P01909  DQA1_HUMAN

Gene name: HLA-DQA1   Description: HLA class II histocompatibility antigen, DQ alpha 1 chain

Length: 254    GTS: 8.11e-07   GTS percentile: 0.144     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 62      gnomAD_SAV: 77      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVLKHNLNSLIK 100
BenignSAV:            L  T     MT     KG        C      F  L   FS       E     EK  AA #W #F##L   R G  R M  #     I#  
gnomAD_SAV:    I   EV    T VM  AT  R  KG  T   V   I M    S    FS       E F                                         
Conservation:  0000000000111221200000112210003000010120110101211012524222323111111300020400001221032011012100100011
STMI:          SSSSSSSSSSSSSSSSSSSSSSS                                                                             
SS_PSIPRED:        HHHHHHHHHHHHHH       HHH  EEEEEEEEEE      EEEEEE   EEEEEE    EEEE    HH     HHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:        HHHHHHHHHHHHHH       EE   EEEEEEEEEEE    EEEEEEE  EEEEEEE    EEEEE   H      HHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:        HHHHHHHHHHHHH             EEEEEEEEEE      EEEEEE   EEEEEE    EEEE           HHHHHHHHHHHHHHHHH   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDD                                                                                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDD                                                                                  
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            RSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLL 200
BenignSAV:     CY                     V    T                     QA       I#             H  F   #D I           #   
gnomAD_SAV:      K  T  T  S  I L    M V LL  F  F   F          R   AD G   DII  F  VL S  NGH A            LQ   PN    
Conservation:  0020311002270111542113112115244713116392052418115200401220021221104025113115142500341525131514410202
SS_PSIPRED:    H           EEEEEE          EEEEEE        EEEEEE  EE    EEEEEEEE     EEEEEEEEEE     EEEEEEE       EE
SS_SPIDER3:                EEEEEE          EEEEEE   E   EEEEEEE  EEE   EEEEEEEE    EEEEEEEEEE      EEEEEEEE      EE
SS_PSSPRED:                EEEEEE          EEEE         EEEEEEE  EEE       EE       EEEEEEE        EEEEEEEE        
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                     C                                                       C            
CARBOHYD:        N                                       N                                                         

                       10        20        30        40        50    
AA:            KHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL 254
BenignSAV:             T           T       MC      L  Q              
gnomAD_SAV:     Q#  K  V T K  G  I P E   D  C A D  L V   H I     K L 
Conservation:  115011111112220111241322111200121221221110000000000000
STMI:                          MMMMMMMMMMMMMMMMMMMMMMM               
SS_PSIPRED:    EEE         HH HHHHHHHHHHHHHHHHHHHHHHHHH              
SS_SPIDER3:    EE             HHHHHHHHHHHHHHHHHHHHHHHHHH             
SS_PSSPRED:                    HHHHHHHHHHHHHHHHHHHHEEEE              
DO_DISOPRED3:                                             DDDDDDDDDDD
DO_SPOTD:                                                 DDDDDDDDDDD
DO_IUPRED2A:                                                         
REGION:           EPEIPAPMSELTE