P01920  DQB1_HUMAN

Gene name: HLA-DQB1   Description: HLA class II histocompatibility antigen, DQ beta 1 chain

Length: 261    GTS: 1.03e-06   GTS percentile: 0.237     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 85      gnomAD_SAV: 117      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSWKKALRIPGGLRAATVTLMLAMLSTPVAEGRDSPEDFVYQFKAMCYFTNGTERVRYVTRYIYNREEYARFDSDVEVYRAVTPLGPPDAEYWNSQKEVL 100
BenignSAV:          S     D  V       SI  ##L     P     # L GL        L  #LS #      ##      GEF V  LQ #L#  N KR  D# 
gnomAD_SAV:        ES    R    P   FV ST     V    P          L    HR  LM# AS*H      NT S     #HS  SL   LN KN  RRRDD 
Conservation:  0000000000000000010111110000000011100021010000803122211222402022520212253422313162320410041024111001
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                    
SS_PSIPRED:              HHHHHHHHHHHHHHH              EEEEEEEEEE     EEEEEEEEEE  EEEEEEE    EEEE        HHHHH  HHHH
SS_SPIDER3:        EE E    HHHHHHHHHHHH              EEEEEEEEEEEE    EEEEEEEEEE  EEEEEE     EEEE        HHHH   HHHH
SS_PSSPRED:        EEEE     HHHHHHHHHHHH               EEEEEEEEEE    EEEEEHHHHHHHHHHHEE    EEEEE        HHHH  HHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDD   DD                                                                           
DO_SPOTD:      DDDD         DDDDDD            D                                                                    
DO_IUPRED2A:                                                                                                  D    
DISULFID:                                                    C                                                     
CARBOHYD:                                                        N                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            ERTRAELDTVCRHNYQLELRTTLQRRVEPTVTISPSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNDQEETTGVVSTPLIRNGDWTFQILVMLEMTPQHG 200
BenignSAV:      ##  #V R      EV## GI                         I        #H   Q  # GE   A                     D  L R 
gnomAD_SAV:      A  *V#R     C             S MS         K  K  I  MI C#  H  LW  Q GEGKI SI   R#V   A      M   VA   E
Conservation:  0001101101600111000010000021803141111111111212629151259910815292463222223312422323635354223073126114
SS_PSIPRED:    HHHHHHH              EE      EEEEEE          EEEEEEE EE    EEEEEE  EEE   EEE   EE    EEEEEEEEE      
SS_SPIDER3:    HHHHHHHHHH                   EEEEE          EEEEEEE   E   EEEEEEE  EEEEEEEEE         EEEEEEEEE E    
SS_PSSPRED:    HHHHHHHH HHH         EE EE   EEEEEE          EEEEE        EEEEEE   EEE              EEEHHHHHHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                              DDD   DD                                        D                        
DISULFID:                C                                     C                                                   

                       10        20        30        40        50        60 
AA:            DVYTCHVEHPSLQNPITVEWRAQSESAQSKMLSGIGGFVLGLIFLGLGLIIHHRSQKGLLH 261
BenignSAV:      I           S  IA          N     V                RQ  R     
gnomAD_SAV:       I QMQQAR    TIA  WD     *N   G              D       *   RQ
Conservation:  4154716361541172111501001111123215224224534332253212002230000
STMI:                                        MMMMMMMMMMMMMMMMMMMMM          
SS_PSIPRED:     EEEEEEE       EEEEEE   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       
SS_SPIDER3:     EEEEEEE       EEEEEE    HHHHHHHHHHHHHHHHHHHHHHHHHHHHH       
SS_PSSPRED:     EEEEEEE        EEEEE   HHHHHHHHHHHHHHHHHHHHHHHHHHHHH        
DO_DISOPRED3:                                                           DDDD
DO_SPOTD:                                                            DDDDDDD
DO_IUPRED2A:                                                                
REGION:                            RAQSESAQSK                               
DISULFID:          C