P02708  ACHA_HUMAN

Gene name: CHRNA1   Description: Acetylcholine receptor subunit alpha

Length: 482    GTS: 2.534e-06   GTS percentile: 0.814     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 18      BenignSAV: 5      gnomAD_SAV: 255      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEPWPLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQGDMVDLPRPSCVTLGVPLFSHL 100
gnomAD_SAV:    TK# #VF  VNP*    I   K# SH       E CCM W GD  H* M   M     H      I  FA  SMH   RGI    CTRSA F AS S#N 
Conservation:  0000100011110242131551496284216823864448892342416266799998996488999998479766744444444444444444444444
STMI:          SSSSSSSSSSSSSSSSSSSS                                                                                
SS_PSIPRED:       HHHHHHHHHHHHHHH   HHHHHHHHHHH      EE        EEEEEEEEEEE         EEEEEEEEEE                      
SS_SPIDER3:      HHHHHHHHHHH        HHHHHHHHHH H     EE       EEEEEEEEEEEEEE E EE  EEEEEEEEE                       
SS_PSSPRED:      HHHHHHHHHHHHH      HHHHHHHHHHHHH             EEEEEEEEEHHHHHH     EEEEEEEEEE                       
DO_DISOPRED3:  BBBDDDDDDDDDDDDDDD                                                                      DDD         
DO_SPOTD:       DDDDDDDDDDDDD                                                                                      
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            QNEQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDLVLYNNADGDFAIVKFTKVLLQYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYDGSV 200
PathogenicSAV:                                                                             L                    S  
gnomAD_SAV:     S   G C  QC AE   SM N  FS  NT*#     #  #  E TV   AE P       M        NH  MTIIYL SE   #T     CI   A 
Conservation:  4444929369294934848534654461346388589856979695846388667455927594999977999975967998849896685868756633
SS_PSIPRED:       EEEEEE    HHHH    EEEE HHH     EEEEE       EEEE  EEEE   EEEE   EEEEE  EEE         EEEEEEEE      E
SS_SPIDER3:        EEEE E   HHHH    EEEEEHHH     EEEEE     EEEEEEEEEEEE   EEEE       EE EEEE E     EEEEEEEEEEE    E
SS_PSSPRED:                         EEE          EEEEE      EEEEEEEEEEEE  EEEE    EEEE EEEEEEE       EE    EE     E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                              C             C             
CARBOHYD:                                                                                           N              

                       10        20        30        40        50        60        70        80        90     
AA:            VAINPESDQPDLSNFMESGEWVIKESRGWKHSVTYSCCPDTPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTV 300
PathogenicSAV: M                               M                    L       K        Y      V      W        F    I 
BenignSAV:        S                                   N                                                            
gnomAD_SAV:    #  DL  Y   P   TG R G M  PQD    MI  * LNIS M    NLI  C        I  S   L   S#  VC    *W  T V   L      
Conservation:  8362574549976479599992676455779271939743599997797757679797665676697599799766777999677997999776779979
STMI:                                                                 MMMMMMMMMMMMMMMMMMMMMMMMM       MMMMMMMMMMMMM
SS_PSIPRED:    EEEEE      HHHHHH   EEEEE  EEE               EEEEEEEE  HHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHH
SS_SPIDER3:    EEEEE       H   E  EEEEEEE EEE EE         E EEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHH          HH HHHHHHHHHHH
SS_PSSPRED:    EEEEE               EEEEE       E            EEEEEEEEE   EEHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                          CC                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            FLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHVMPNWVRKVFIDTIPNIMFFSTMKRPSREKQDKKIFTEDIDISDISGKP 400
PathogenicSAV: L            I     A         I          L                                                           
BenignSAV:                                                                                    G  V                 
gnomAD_SAV:        VM     M   AS TRN #     SI T V  N  DL  Y H    R  HS* W I M#I    T    K  Q  GTKVR   I  T   H     
Conservation:  7779797777777779777799999995596677776777976979677794961957666736584385896778643542142243364999799973
STMI:          MMMMMM               MMMMMMMMMMMMMMMMMMMM                                                           
SS_PSIPRED:    HHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHH            HHHHHHHHHHHHHHHH        HHH           HHH     
SS_SPIDER3:    HHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHEEEEEE          HHHHHHHHH HHHH          HHH                   
SS_PSSPRED:    HHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHEEE           HHHHHHHHHHHHHHHH        HHHHHH                
DO_DISOPRED3:                                                                               DDDDDDDDDDDDDDDDDDDDD  
DO_SPOTD:                                                                                 DDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80  
AA:            GPPPMGFHSPLIKHPEVKSAIEGIKYIAETMKSDQESNNAAAEWKYVAMVMDHILLGVFMLVCIIGTLAVFAGRLIELNQQG 482
PathogenicSAV:                                                               W  R                
BenignSAV:                                        D                                              
gnomAD_SAV:     RSLT   CS  Q  Q  RV K  R VVK V   RK  KEV G  CI R I  VP R  R     R   ML  L T    * 
Conservation:  1613327476546586854897869668646547666447469957697947767735772774697567779965774342
STMI:                                                               MMMMMMMMMMMMMMMMMMM          
SS_PSIPRED:                  HHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  
SS_SPIDER3:                  HHHHHHHHHHHHHHHHH    H HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   
SS_PSSPRED:                  HHHHHHHH HHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH    
DO_DISOPRED3:                                                                                  BB
DO_SPOTD:      DDDD                                                                           DDD
DO_IUPRED2A: