P04180  LCAT_HUMAN

Gene name: LCAT   Description: Phosphatidylcholine-sterol acyltransferase

Length: 440    GTS: 1.655e-06   GTS percentile: 0.517     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 36      BenignSAV: 7      gnomAD_SAV: 205      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGPPGSPWQWVTLLLGLLLPPAAPFWLLNVLFPPHTTPKAELSNHTRPVILVPGCLGNQLEAKLDKPDVVNWMCYRKTEDFFTIWLDLNMFLPLGVDCWI 100
PathogenicSAV:                             I    #  M                S  R            E                            S 
gnomAD_SAV:      L S   P  M         VTR    S      IM E      SQL   MLS P           HLE  I C#Q     S *  F V   F      
Conservation:  2222222222000012200112222222200000000100002200000015751376575655565125444724572157667454345464334996
STMI:          SSSSSSSSSSSSSSSSSSSSSSSS                                                                            
SS_PSIPRED:         HHHHHHHHHHHHHH      HHHH          HHH      EEEE        EEEE                 EEEEE HHHHHH    HHH
SS_SPIDER3:          HHHHHHHHHH H       EEEE                   EEE       EEEEEE                 EEEE  HHHH    H HH 
SS_PSSPRED:           HHHHHHHHHHH      EEEEEE                  EEE        EEEE                   EEEE HHHH  HHH   E
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DD                                                           
DO_SPOTD:                                         DDDDDDDD                                                         
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                               C                       C  
CARBOHYD:                                                 N                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            DNTRVVYNRSSGLVSNAPGVQIRVPGFGKTYSVEYLDSSKLAGYLHTLVQNLVNNGYVRDETVRAAPYDWRLEPGQQEEYYRKLAGLVEEMHAAYGKPVF 200
PathogenicSAV:                 T     C                       I       D   #    #     RW        N                    
BenignSAV:                  MP                                                 T                C                  
gnomAD_SAV:    NY    *SQ    M ST  IH PI SVS  F   *V          I   K      MQYK MHTT CNCQ   S E  N H# E   K  RTTCRNS  
Conservation:  9635526716431212638815569978383459668134229743356427632991862457668677823714512750172167928211432564
SS_PSIPRED:    HH EEEEE     EE     EEE       HHHEE  HHH HHHHHHHHHHHHH        EEE          HHHHHHHHHHHHHHHHHHHH   EE
SS_SPIDER3:     HEEEEE      E     EEEE      EEEHE     HHHHHHHHHHHHHHH        EEEEE      H   HHHHHHHHHHHHHHHHH    EE
SS_PSSPRED:    EEEEEEE             EEE       EEEE   HHHHHHHHHHHHHHHHHH        EEE        HHHHHHHHHHHHHHHHHHHH    EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:             N                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            LIGHSLGCLHLLYFLLRQPQAWKDRFIDGFISLGAPWGGSIKPMLVLASGDNQGIPIMSSIKLKEEQRITTTSPWMFPSRMAWPEDHVFISTPSFNYTGR 300
PathogenicSAV:     N                           P        N         K               H       K                     #  
BenignSAV:                                    T                                   C                                
gnomAD_SAV:     TS   SS    C   # S T  EH    LTT#    D F R T A       R     N  Q   *# I     #   CV     R LV  S    R H
Conservation:  5459969534375772474619854561356586489684393426458955347644234558245733444395492103841244753751168712
SS_PSIPRED:    EEEE HHHHHHHHHHHH  HHHHHHHH EEEEE       HHHHHHHH           HHHHHHHHHH    HHH             EE       HH
SS_SPIDER3:    EEE   HHHHHHHHHHH  HHHHHHHHHEEEEE       H HHHHH         HHHHHHHHHHHH    HHHH           EEE         H
SS_PSSPRED:    EEEE   HHHHHHHHHH  HHHHHHHHHHEEE            HHH           HHHHHHHHHHH                             HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
ACT_SITE:          S                                                                                               
CARBOHYD:                                                                                                     N    

                       10        20        30        40        50        60        70        80        90     
AA:            DFQRFFADLHFEEGWYMWLQSRDLLAGLPAPGVEVYCLYGVGLPTPRTYIYDHGFPYTDPVGVLYEDGDDTVATRSTELCGLWQGRQPQPVHLLPLHGIQ 400
PathogenicSAV:                 I             S M    F      M C                       M                             
BenignSAV:                          C                                                                              
gnomAD_SAV:    E       VP #K   #    CG PTVF T  M    F#SM #H# H    HRS S R T A   K V NM V C  DFR     H  HSGY     R H
Conservation:  8624671753314871643343273114059572448577262283145183117741482221243895764217314921812292428031642421
SS_PSIPRED:    HHHHHHHH    HHHHHHHHHH HH        EEEEEEE       EEE            EEE        HHHHHHHHHH       EEEEE     
SS_SPIDER3:    HHHHHHHH      EEHHE              EEEEEE       EEEEE          EEEE        HHHHHHHHH        EEEEE     
SS_PSSPRED:    HHHHHHHHH   HHHHHHHHHHHHH       EEEEEEE       EEEEE           EEEE     HHHHHHHHHHHHH      EEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                      D                                
ACT_SITE:                                                                          D                               
DISULFID:                                          C                                          C                    

                       10        20        30        40
AA:            HLNMVFSNLTLEHINAILLGAYRQGPPASPTASPEPPPPE 440
PathogenicSAV:    V V                                  
gnomAD_SAV:            P VK  S      CS  TS   S N  SLL  
Conservation:  8435525015522531582212222222222222222222
SS_PSIPRED:    HHHHH  HHHHHHHHHHHHH HH                 
SS_SPIDER3:    HHHHH  HHHHHHHHHHH                      
SS_PSSPRED:    EEE    HHHHHHHHHHHH                     
DO_DISOPRED3:                       DDDDDDDDDDDDDDDDDDD
DO_SPOTD:                            DDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                           DDDDDDDDDDDDDDDD
ACT_SITE:      H                                       
CARBOHYD:             N                      T S