P08123  CO1A2_HUMAN

Gene name: COL1A2   Description: Collagen alpha-2(I) chain

Length: 1366    GTS: 1.456e-06   GTS percentile: 0.427     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 257      BenignSAV: 32      gnomAD_SAV: 644      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLSFVDTRTLLLLAVTLCLATCQSLQEETVRKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRG 100
PathogenicSAV:                                                                                             I      #
BenignSAV:                      G                      H                 P                                         
gnomAD_SAV:       L  #  S  P A# G TI LFF       S  R GATHE    T T# T D  C           DSS  S  L        L    R    I S S
Conservation:  5222210722442222001222510001000394192797395274191392590333391291396676999372655754272131527629459379
STMI:          SSSSSSSSSSSSSSSSSSSSSS                                                                              
SS_PSIPRED:     EEEE    EEEEEEEEE                                                                                  
SS_SPIDER3:    EEEEE    EEEEEEEEEE                                                                                 
SS_PSSPRED:     EEE     HHHHHHHHHH                                                                                 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DB           D         D DD DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
PROPEP:                              QSLQEETVRKGPAGDRGPRGERGPPGPPGRDGEDGPTGPPGPPGPPGPPGLGGNFAA                     

                       10        20        30        40        50        60        70        80        90     
AA:            PPGAAGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGE 200
PathogenicSAV:         D  #  R  V     D     #  V  D       G                                    R  D     E  S  #  D 
gnomAD_SAV:     S T R T L     T S       I T   # L      T #   L   RQT    I  ALSTH  S   V L LND       #  N HAS   MN  
Conservation:  5291393495793292496997773372174699393497397994597597697792292797997997797794993695394794794493290999
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDDDDD DD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CARBOHYD:                                                                                  K                       

                       10        20        30        40        50        60        70        80        90     
AA:            PGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGNP 300
PathogenicSAV:  R        D              D       C         D  #  V  D  #  #  #  #  R        V  S  R  S     #     S  
BenignSAV:                               T                     N                    I     T                 F      
gnomAD_SAV:      PHA      P  #C R## TEH  T    STC   EIL  M    ST    S      # RE D   I  T S A TS H KE        I AL   
Conservation:  3963944937921927734767763732952959957952963765973936967979959949973933922944964939762923933994972997
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRG 400
PathogenicSAV:       D        S  #  S  E  #  D  #  #           C  S     S        W  #     V  #     R  R  #     E   
BenignSAV:                                                V                                                        
gnomAD_SAV:     E           F  I         #        S    T        ST    D  S      T S           Q  HK KP FP         A
Conservation:  9299539799539369459499799677339539429439399429779339199739279769239229249439999769229929429319139199
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGP 500
PathogenicSAV:   #  S  V  V     S  D  S     E  E     #  R     R     #  L  S     S  A  C  V           R     #       
BenignSAV:                                                                                       #                 
gnomAD_SAV:       FH I        II     C T# LP  Q R  ET HR  L  K  I FS        T     I FL M#SKL  V  D    #   N L      
Conservation:  2492993792375293394692992392391695399299499492294995592593296397594292391799296397393995693799999994
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            TGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAA 600
PathogenicSAV:  S  #  S  D     #        #                    #     D  #     #  A  S           D  A  #     S        
BenignSAV:                                S                    A              T                                    
gnomAD_SAV:    S  T Q S   Q  V# SQ VS  Y  S S     LR    #      A  S           T        T  R D     T      H     G V 
Conservation:  3944972967731733717727746976953962731713937972746945977946674723773992947923974923944927979925924952
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAG 700
PathogenicSAV:       A     R  V        #     V  V  D  S     #              S  #  C  D     #  S  D  D  E  D  R     #
BenignSAV:                                                                                  H              Q       
gnomAD_SAV:     T   V  *     L        RA#A     #    #G    KT  V L        G  #   T DS     LA   TI VS     A NQ  S T  
Conservation:  9409229399559459379399949139229239339439379999349179399699319149309409599599249719579939429779929339
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGP 800
PathogenicSAV:               D              #  C  C  R        #  #  #     #     #  #  S     S  #  R  C  D     #    
BenignSAV:                                               G                                                         
gnomAD_SAV:    AD     Q #   G  I     D C        L        G   E   S      LI G        TL R  GH NE S# VP       Q  #L  
Conservation:  3494393992697799296394397697594596393697793393997193194294293396397292394191794296392494994498294599
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIA 900
PathogenicSAV:  #  D  S     E     S              #  S  S  A     E     #  S  S  S           #        #     D  D  V  
BenignSAV:                          H                                T T                                           
gnomAD_SAV:            S  LS R  IH LH GR #F G#  I TD     T    T  DT NT S   A    FP T   V  # LK AH     G    KS L  VV
Conservation:  6942982933923975927929993961943951901931921978944983933935923934917912923998938954939922921833942932
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  D   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSG 1000
PathogenicSAV:       #     V  R  D           R     D           S     #        D        V        #        V     #   
BenignSAV:                                                          T                                              
gnomAD_SAV:    SLSA H    G      SR    T C   L  N  A H#       DC S   T  I T S   LY  MSAT  R  S     P LI  S T     LG 
Conservation:  9449399529339349259239959879659499579939159199599377319319149359429239449629599729529239139439399329
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPGPPGP 1100
PathogenicSAV:   D  A     #              #  #     #     S                       D     V     C     C  #  D     #  R 
BenignSAV:                          F                        M                   H                                 
gnomAD_SAV:    AE  H N  D     H  F      S       T     YH  S FMSL  LG         R  SHA P   F T  F*SL        RA SS     
Conservation:  2492997992394491795393795297695792472376392371173364676479377199694291292394491993393299297793992795
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PGVSGGGYDFGYDGDFYRADQPRSAPSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTG 1200
PathogenicSAV:  #                P                            P                E                             Y     
BenignSAV:     L                                                                                       E        P  
gnomAD_SAV:     D NS V Y   N ELH     H  #F# #  * AG   N   ##TQN #    T RT V#  HN  FN  A R D H      E  V#  #    YF  
Conservation:  7924975972744154779997333354649749797779496497745649999797997699976969659467477799779732967575959255
SS_PSIPRED:                                           HHHHHHHHH                                            EEE     
SS_SPIDER3:                                            HHHHHHHH                 HHH          EE           EEEE     
SS_PSSPRED:                                          HHHHHHHHHH                                           EE       
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDD D  D D    D                                                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                  
PROPEP:                           DQPRSAPSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTG
METAL:                                                                                         D NQ C  D           
DISULFID:                                                                    C                               C     

                       10        20        30        40        50        60        70        80        90     
AA:            ETCIRAQPENIPAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVEL 1300
PathogenicSAV:                                                                 P                                   
BenignSAV:         Q                                              A                                          P     
gnomAD_SAV:    KN VW# T  TQD  L  RFRG#TYFR   A#   REL    QRMSY K  P*    S    C C         G  HT DK  K Q S   H P   D 
Conservation:  4796162421221552432310355374794545937749605347353979977975977739599597797975996423394737743969779997
SS_PSIPRED:                             EEEEEE                     HHHHHHHHHEEEEE EEEEE   HHH          EEE       EE
SS_SPIDER3:     EEEE                    EEEEE EE   EEEE             HHHHHH   EEEEEEEEEE   EEE        HHHHE       EE
SS_PSSPRED:     EEE                                 EEE        HHHHHHHHHHHHHHHHH EEEEE  HHH         HHHHHHH        
DO_DISOPRED3:             DD                                                                              DDD DDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                 D                                                                                     
PROPEP:        ETCIRAQPENIPAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVEL
DISULFID:        C                                                                    C                            
CARBOHYD:                                                                        N                                 

                       10        20        30        40        50        60      
AA:            VAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFFVDIGPVCFK 1366
BenignSAV:                                                          H            
gnomAD_SAV:     G    K I  IPA   PRQI V  N N   I   A L    H  SW MSDD  K LM V SI L 
Conservation:  366996999749639796373327266767637264467736656346673136430324677767
SS_PSIPRED:           EEEEEEE          EEEEEEEE   HHH   EEE           EEEEE      
SS_SPIDER3:           EEEEEE    E    E EEEEEEEE        EE EEE       EEEEEEE EE   
SS_PSSPRED:           EEEEEE             EEEEEE           EE        EEEEEEE      
DO_DISOPRED3:  DD               D DDDD                                           
DO_SPOTD:                                                                        
DO_IUPRED2A:                                                                     
PROPEP:        VAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFFVDIGPVCFK
DISULFID:                      C                                              C