P09429  HMGB1_HUMAN

Gene name: HMGB1   Description: High mobility group protein B1

Length: 215    GTS: 1.84e-07   GTS percentile: 0.004     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 31      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPS 100
gnomAD_SAV:                                 QQ                                                LS   A          R    
Conservation:  1074222354643453856524434745252532242653555296637824322461488535618624544772373833802113176864796465
SS_PSIPRED:                  HHHHHHHHHHHHHHHH       HHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHH                       
SS_SPIDER3:                  HHHHHHHH HHHHHHH       HHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHH                          
SS_PSSPRED:                  HHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHH                        
DO_DISOPRED3:  BBBBBBDDDDDDDDD          DDDDDDDDDDDDDDD                                             DDDDDDDDD      
DO_SPOTD:      DDDDDDDDDD                                                               DDDDDDDDDDDDDDDDDDDDDDD    
DO_IUPRED2A:   DDDDDDDD  DD                 DDDDD                     DDD D  DDDDD   DDDDDDDD   DDDDDDDDDDDDDD     
DNA_BIND:              PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYI               PKRPPS
SITE:                   RG                                                       DK                                
DISULFID:                            C                     C                                                       
MOTIF:                                   HKKKHPDASVNFSEFSK                                                         
REGION:        MGKGDPKKPRGKMSS                                                                PPKGETKKKFKDPNAPKRPPS
MODRES_P:                                        S                                                                S
MODRES_A:        K   KK   K               KKK            K                                              K          

                       10        20        30        40        50        60        70        80        90     
AA:            AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 200
BenignSAV:                                                            Q                        G                   
gnomAD_SAV:                     S                   T E     N  V                    GS  A      G    K   E   D E    
Conservation:  6883864616426403176245664554463393022113716344581487655342223221121011002111311012120012132453242324
SS_PSIPRED:    HHHHH HHHHHHHHHH     HHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHH     HHH     HHHHHHHHHHH        HHHH
SS_SPIDER3:    HHHHH HH HHHHHHH     HHHHHHHHHHHHH   H    HHHHHHHHHHHHHHHHHHHHHH   H HHHH        HHHH H             
SS_PSSPRED:      EHHHHHHHHHHHH      HHHHHHHHHHHHHH  HHHH HHHHHHHHHHHHHHHHHHHHHHH    HHH     HHHHHHHHHHHHHHH   HHHHH
DO_DISOPRED3:                                     DDDDDDDDDDDDDDDDDD            DDDDDDDDDDDDDDDDDDDDDDDBBBBDDBBDDDB
DO_SPOTD:                                                                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DNA_BIND:      AFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYR                                     
MOTIF:                                                                                      AEKSKKK                
REGION:        AFFLFCSE                                                                                            
MODRES_A:                                KK            K                              KK   K  K KKKK               

                       10     
AA:            EDEEDEDEEEDDDDE 215
gnomAD_SAV:     YDDEDE DDEE   
Conservation:  432232111112021
SS_PSIPRED:                   
SS_SPIDER3:                   
SS_PSSPRED:    HH    HHHH     
DO_DISOPRED3:  BBBBBBBBBBBBBBB
DO_SPOTD:      DDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDD