P09871  C1S_HUMAN

Gene name: C1S   Description: Complement C1s subcomponent

Length: 688    GTS: 1.716e-06   GTS percentile: 0.544     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 6      gnomAD_SAV: 345      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MWCIVLFSLLAWVYAEPTMYGEILSPNYPQAYPSEVEKSWDIEVPEGYGIHLYFTHLDIELSENCAYDSVQIISGDTEEGRLCGQRSSNNPHSPIVEEFQ 100
BenignSAV:                                      G                                                                  
gnomAD_SAV:     RWV      VC #V  A# E     SS E  SG A TP GVG     RV    # PVT   VS   E   V    P      E KC DST#F V G   
Conservation:  0011111000101010102230315624611611101012140441731525141242321311601423250111012115561111011112101131
STMI:          SSSSSSSSSSSSSSS                                                                                     
SS_PSIPRED:      HHHHH HHHHH        EEE            EEEEEEE     EEEEEEEEEEEE        EEEEEE  EEEEEEE             EEEE
SS_SPIDER3:      HHH    HHH      EEEEEE            EEEEEEE     EEEEEEEEEEEEE       EEEEEE  EE E   EE          EEEEE
SS_PSSPRED:     HHHHHHHHHH          EEE             EEEEEEE    EEEEEEEEEEEE        EEEEE                        EEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDD                                                                                    
DO_SPOTD:      DDDDDDDDDDD                                                                                         
DO_IUPRED2A:                                                                                      DD               
METAL:                                                                    E       D                                
DISULFID:                                                                      C                 C                 

                       10        20        30        40        50        60        70        80        90     
AA:            VPYNKLQVIFKSDFSNEERFTGFAAYYVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGVNCSGDVFTALIGEIASPNYPKPYPENS 200
BenignSAV:                       H                                                                                 
gnomAD_SAV:     S#  F     A# FD DH M   V D VI V   IG LE T G     L  S   FR R  L YG TN #V   #   L   #  MV  H L LF##  
Conservation:  3122140516142132211316914261214144500000005141434236451746202304104122303121211211015021421151114003
SS_PSIPRED:    E   EEEEEEEE          EEEEEEEEE                      EE       EE               EE   EEEE            
SS_SPIDER3:    E   EEEEEEEE          EEEEEEEEE                      EEEE    EEE       EEE    EEE   EEEE            
SS_PSSPRED:    E   EEEEEEE           EEEEEEEEE                               E                E     EE             
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                     D                 DI E              NF  G                                               
DISULFID:                                        C       C   C        C C            C   C                         
CARBOHYD:                                                                               N                          

                       10        20        30        40        50        60        70        80        90     
AA:            RCEYQIRLEKGFQVVVTLRREDFDVEAADSAGNCLDSLVFVAGDRQFGPYCGHGFPGPLNIETKSNALDIIFQTDLTGQKKGWKLRYHGDPMPCPKEDTP 300
PathogenicSAV:                                                                                              R      
gnomAD_SAV:    G   E W   R  A  NMQ       V   VR  PY  L F  YG##VL       E      RND  GVT   Y    NM *  GC RNSI   N NSS
Conservation:  1705161521530415150020735501120016150514121011113578100126104151441414050460140218523051211018201011
SS_PSIPRED:    EEEEEEE     EEEEEEEEEEEE            EEEEEE  EEEEE          EEE     EEEEEEE        EEEEEEE           
SS_SPIDER3:    EEEEEEE     EEEEEEEEEEEEE           EEEEEE  EEE           EEEEE   EEEEEEEE        EEEEEEE           
SS_PSSPRED:      EEEEEE    EEEEEEEEEE              EEEEEE                 EEEE    EEEEEEE        EEEEEE            
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                  DDDDD
DISULFID:       C                               C                C                                          C      

                       10        20        30        40        50        60        70        80        90     
AA:            NSVWEPAKAKYVFRDVVQITCLDGFEVVEGRVGATSFYSTCQSNGKWSNSKLKCQPVDCGIPESIENGKVEDPESTLFGSVIRYTCEEPYYYMENGGGGE 400
BenignSAV:           V    I              L                                                       H                 
gnomAD_SAV:    TY R  V    I  N       VE KI  ES   S#S L   N R# RT     RS   V    TG    KN    * CF  CH  # T*  V SE  EG
Conservation:  1412140211802251304181174141120001014041821361511102031233430410201401100103141303120411122120000001
SS_PSIPRED:       EE           EEEEE   EEEE   EEE  EEEEE     EE                                EEEEEE   EEEEE      
SS_SPIDER3:         H H       EEEEEE    EEE   EEEEE EEEE     E     EE              EE          EEEEE    EEEEEE    E
SS_PSSPRED:               EE  EEEEEE    EEE        EEEE                                        EEEEEE   EEEEE      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                   DD                                  
DISULFID:                          C                   C            C    C                          C              

                       10        20        30        40        50        60        70        80        90     
AA:            YHCAGNGSWVNEVLGPELPKCVPVCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDNPWAGGALINEYWVLTAAHVVEGNREPTMYVGSTSVQTSRLAKS 500
gnomAD_SAV:       V# RN  SDM  L  LN   D  LR  #     W# E FN G   L *  LL  TRG  V V  HC  MV   A   G SA#  E   L  TW ET 
Conservation:  3131113031210010004030325511000100012412400510214962423000055546611164454431321000103236110100000000
SS_PSIPRED:            EE                                         EEE       EEE    EE  HHHHH      EEEEEEE          
SS_SPIDER3:    EE      EE                     HHHH  E            HEHE     E EEE    EEE HHHH       EEEEEEE          
SS_PSSPRED:    E       EE                      HHH               EEEE        EE    EEE   EEE       EEEEE           
DO_DISOPRED3:                   D                                                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                        D                                                 D        D   
ACT_SITE:                                                                                H                         
DISULFID:        C                 C   C                                                                           
CARBOHYD:           N                                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            KMLTPEHVFIHPGWKLLEVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKV 600
gnomAD_SAV:      F L  M   LA  VP F  R NS       LQ      I   I S F L IT Y   V  G        *A    C IC  V  FS T S      E 
Conservation:  0000111223621500000000002533557654411241320032443451000110200101415455810100002006223031311000411110
SS_PSIPRED:    EEE  EEEEE                    EEEEE                            EEEEEE             EE EE EE HHHHHHHH 
SS_SPIDER3:     EEEE EEEE                  EEEEEEE           HHH              EEEEE  EE       HHHEEEEEEE  HHHHHHHH 
SS_PSSPRED:          EEEE                   EEEEEE           EEE              EEEEE         HHHHHHHHE     HHHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                D                                  D                   
ACT_SITE:                                  D                                                                       
DISULFID:                                                      C                                             C     

                       10        20        30        40        50        60        70        80        
AA:            EKPTADAEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCGTYGLYTRVKNYVDWIMKTMQENSTPRED 688
gnomAD_SAV:    G    G D    I  L F     S      N       HVS EN  V T   L   S    CR   ##NS     T IT*   NRHK 
Conservation:  0000000000033124484501011346045364443100000110214076475501520333342501421540112100100000
SS_PSIPRED:                   EEEE               EEEEE       EEEEEEEEE        EEEEHHHHHHHHHHHHHH       
SS_SPIDER3:                   EEEE               EEEEE      EEEEEEEEE          EHHHHHHHHHHHHHHH        
SS_PSSPRED:                    E                  EEEE      EEEEEEE          EEEEEEHHHHHHHHHHHHH       
DO_DISOPRED3:                                                                               DDDDDDDDDDD
DO_SPOTD:                                                                                       DDDDDDD
DO_IUPRED2A:                                 DDDDDD                                             DDDDDDD
ACT_SITE:                                     S                                                        
DISULFID:                       C         C                              C