P0C6S8  LIGO3_HUMAN

Gene name: LINGO3   Description: Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3

Length: 592    GTS: 1.525e-06   GTS percentile: 0.459     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 224      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MTCWLCVLSLPLLLLPAAPPPAGGCPARCECTVQTRAVACTRRRLTAVPDGIPAETRLLELSRNRIRCLNPGDLAALPALEELDLSENAIAHVEPGAFAN 100
gnomAD_SAV:     IW                                               R         V      Y     V#   #   MVVRKKT TLM* RTL S
Conservation:  2112001113011201111001025834668231063828126543338435806543855329457542234623520585585638274149665632
STMI:          SSSSSSSSSSSSSSSSSSSSSSSS                                                                            
SS_PSIPRED:      HHHHHHHHHHHH               EEE    EEE                  EEE      EEE HHH        EEE       EE       
SS_SPIDER3:      HHHH   HHHHH H             EE     EEEEE     E         EEEEE   EEEEE   HH       EEE    EEEEE       
SS_PSSPRED:     HHHHHHHHHHHHHH             EEEE    EEEE             HHHEEEE          HHHH       EEE                
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDD                                                                                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDD                                                                                
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            LPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESLGHLRSL 200
gnomAD_SAV:    VQL  IV  G   #T  Q #  RH # P#V      T I    C     Q V   KM  IN  V  C V     T       H HPA  PR     QH  
Conservation:  8219429386597958682849248379829979495697989559677339219668986977773599299358249367699884564668536449
SS_PSIPRED:         EEE                     EEE                     EEE                     EEE                    
SS_SPIDER3:         EEEE   E EE             EEEE   EEEE             EEEEE     E    H        EEEE   E  EE    H      
SS_PSSPRED:         EEE                               E   HHH       EEE     EEEE HHHH       EEE           HHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                N                                                         N               

                       10        20        30        40        50        60        70        80        90     
AA:            GALRLRHLAIASLEDQNFRRLPGLLHLEIDNWPLLEEVAAGSLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELH 300
gnomAD_SAV:     P Q HY  VPF  E       #     MGS      GVSDG WCP        Y  #  #  T  WQ VY#NYV#       M  LR  Q   H P*  
Conservation:  2295833847136653662461393296633864952633147499694495784695638943776351591176995989225336476594595693
SS_PSIPRED:     EEE                     EEE                     EEE          HHHH       EEE                     EEE
SS_SPIDER3:     EEEE      E     H       EEE      EEE          E EEE   EE  E   HH        EEE      E              EEE
SS_PSSPRED:      HHH         HHHHHH     EEEE                     EE         HHHHHHH     EEE                  HHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                    N         N                  N                        

                       10        20        30        40        50        60        70        80        90     
AA:            LAGALLAVVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRLLWIVQRRKTLNFDGRLPACATPAEVRGDALRNLPDSVLFE 400
gnomAD_SAV:     T   M  M      R C  C   PP    F    TP   G      HM E             RH#     H Q Q    #      TV K R    L*
Conservation:  5656292146336629978445685929081566624866545685884816952899666645585656586220839339236561361074664866
SS_PSIPRED:           EE            EEE                     EEE          HHHHHHHHHHH             HHH    HH   HHHHHH
SS_SPIDER3:    E      EE   H        EEE      H              EEEE       HH HHHHHHHHHH        EE   HHH   EHHH  HHHHHH
SS_PSSPRED:    HH    EEE HHH        EE                      EEEE          HHHHHHHHHH             HHH           HHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                             N                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            YFVCRKPKIRERRLQRVTATAGEDVRFLCRAEGEPAPTVAWVTPQHRPVTATSAGRARVLPGGTLEIQDARPQDSGTYTCVASNAGGNDTYFATLTVRPE 500
BenignSAV:                              H                                                                          
gnomAD_SAV:       R    SP          #D   H                 L    L         M             *         T   V   CS A   L  
Conservation:  3658559484464663324128304361828552619161844835315321306412342585624213322568563765545666655642825240
SS_PSIPRED:    H        EE     EEE     EEEEEEEE     EEEEE     EE       EEE     EEEE   HHH EEEEEEEEE     EEEEEEEEE  
SS_SPIDER3:      EE   EEEE    EEEE    EEEEEEEE      EEEEE     EE      EEEE    EEEEEE  HHH EEEEEEEEEE    EEEEEEEE   
SS_PSSPRED:     EE             EEE    EEEEEEEE      EEEEE     E       EEEE    EEEEEE      EEEEEEEE      EEEEEEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                 DD                       DDDDDDDD    DDD          DDD          DDD                DDD 
DISULFID:                                  C                                                  C                    
CARBOHYD:                                                                                             N            

                       10        20        30        40        50        60        70        80        90  
AA:            PAANRTPGEAHNETLAALRAPLDLTTILVSTAMGCITFLGVVLFCFVLLFVWSRGRGQHKNNFSVEYSFRKVDGPAAAAGQGGARKFNMKMI 592
gnomAD_SAV:       SL #   RKQM VT H   #   M M AT  R    # I  #LA   LC   C#    S W     CR   SV T V   T#       
Conservation:  30235401021624342265666645687656798557997767776677466586866545554657686355343333255345746565
STMI:                                         MMMMMMMMMMMMMMMMMMMMM                                        
SS_PSIPRED:                 HHH       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH            EEEE                 EEEE  
SS_SPIDER3:                           HHHHHHHHHHHH  HHHHHHHHHHHHEHH       E    EEE EEE                E    
SS_PSSPRED:                            HHHHHHHHHHHHHHHHHHHHHHHHHHHHH           EEEEEE               EE EE  
DO_DISOPRED3:                                                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D   
DO_SPOTD:         DDDDDDDDDDDDD                                         DDDDD         DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:    DDDDDDDDDDDD                                                                               
CARBOHYD:                 N