P10253  LYAG_HUMAN

Gene name: GAA   Description: Lysosomal alpha-glucosidase

Length: 952    GTS: 3.343e-06   GTS percentile: 0.941     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 157      BenignSAV: 33      gnomAD_SAV: 658      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGVRHPPCSHRLLAVCALVSLATAALLGHILLHDFLLVPRELSGSSPVLEETHPAHQQGASRPGPRDAQAHPGRPRAVPTQCDVPPNSRFDCAPDKAITQ 100
PathogenicSAV: #                                            P                                                      
BenignSAV:                                                                              H              H N T       
gnomAD_SAV:    IA S L Y YLF VISV M# #ATVFV     RY  V SQ   V#F      NL Y  RT    HQ  #EQTSCS # S HRV# H# CLY VS E F #
Conservation:  3111111100021110100111022210110000101011000000101111111111111111111111111001101002013210423323122133
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                         
SS_PSIPRED:            HHHHHHHHHHHHHHHHHHHHHHHH                                                                   H
SS_SPIDER3:            HHHHHHHHHHHHHHHHHHHHHHH   EEEEEEEE                                           HHH           H
SS_PSSPRED:             HHHHHHHHHHHHHHHHHHHHHHHH                                                                  H
DO_DISOPRED3:  BDDDDDDDDDDDDDDDD D                  DDDDDDDDDDDDDDDDDDDD             DDDDDDDDDDD                   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                       
DO_IUPRED2A:   D                                            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                  
PROPEP:                                   GHILLHDFLLVPRELSGSSPVLEETHPAHQQGASRPGPRDAQ                               
DISULFID:                                                                                       C         C        

                       10        20        30        40        50        60        70        80        90     
AA:            EQCEARGCCYIPAKQGLQGAQMGQPWCFFPPSYPSYKLENLSSSEMGYTATLTRTTPTFFPKDILTLRLDVMMETENRLHFTIKDPANRRYEVPLETPHV 200
PathogenicSAV:   #    G                  F                          P                                   HC         
BenignSAV:                           E                                                                           R 
gnomAD_SAV:      WKVSS RHFA R #   GR EE     #ST SR  V K RP D   M A  C S  L  RV    L  ###D  TC RLMM   G  L#D L Q LR#
Conservation:  2132143413122110000001215465441134251201111411411213140013234145013132301431145442425411175654312201
SS_PSIPRED:    HHHHHH  EEE               EE       EEEEE EE   EEEEEEEE            EEEEEEEE   EEEEEEE     EEE        
SS_SPIDER3:    HHHHH   E                EEEE      EEEEEEEEE  EEEEEEEE           EEEEEEEEE   EEEEEEE     EEEE       
SS_PSSPRED:    HHHHHH                             EEEEE      EEEEEEEE           EEEEEEEEE   EEEEEE                 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                 DDD                                            DDDD   
DISULFID:        C    CC                 C                                                                         
CARBOHYD:                                             N                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            HSRAPSPLYSVEFSEEPFGVIVRRQLDGRVLLNTTVAPLFFADQFLQLSTSLPSQYITGLAEHLSPLMLSTSWTRITLWNRDLAPTPGANLYGSHPFYLA 300
PathogenicSAV:        P        L R    #         #  V     N    P  L  L       K   S                  #     #CR     # 
BenignSAV:                        L MH  V                                            A                  D          
gnomAD_SAV:    Y WTL#    MK  K  SRE MHP PYSCL   AALES   V H F PP L RLHCVI  TKR R  I # R*I F   KWN V#M#DVDFCR N     
Conservation:  0020021041324111333213151123042323333344422454533413450252545442225142214123334245224111148443666432
SS_PSIPRED:            EEEEEE    EEEEEE     EEEE      EE   EEEEE                         EEEEEE              EEEEEE
SS_SPIDER3:            EEEEEE    EEEEEE     EEEE      EE   EEEEE             H           EEEEEE            E  EEEEE
SS_PSSPRED:            EEEEEE    EEEEEE     EEEE      EEHHHHHHHH                          EEE                 EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                      N                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            LEDGGSAHGVFLLNSNAMDVVLQPSPALSWRSTGGILDVYIFLGPEPKSVVQQYLDVVGYPFMPPYWGLGFHLCRWGYSSTAITRQVVENMTRAHFPLDV 400
PathogenicSAV:        #R  R   I #     L     G    #           R       P     L          L RL R                   LP  
BenignSAV:                                                               R                                         
gnomAD_SAV:       SRL QRL M     L    H#  T    L  RN Y CV    Q RRM  H P F   L RLSH*S      H CCY  TVNCR #K #  TLLRM A
Conservation:  3412414353333342424426451755443437654745353732721553463355825134424345454434540332133135113212148453
SS_PSIPRED:    E     EEEEEE       EEEE    EEEEEE  EEEEEEEE   HHHHHHHHHHHH       HHHH EEE       HHHHHHHHHHHHH      E
SS_SPIDER3:    EE     EEEEE       EEE     EEEEEE  EEEEEEE    HHHHHHHHHHHH       H HHHHHH       HHHHHHHHHHHHH     EE
SS_PSSPRED:    E      EEEE        EEE     EEEEEE  EEEEEEE    HHHHHHHHHHHH         HHH          HHHHHHHHHHHHHH     E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                               N          

                       10        20        30        40        50        60        70        80        90     
AA:            QWNDLDYMDSRRDFTFNKDGFRDFPAMVQELHQGGRRYMMIVDPAISSSGPAGSYRPYDEGLRRGVFITNETGQPLIGKVWPGSTAFPDFTNPTALAWWE 500
PathogenicSAV: RR #P  V          V                 C K     P         F #                    R  RRV  P  N   L       
BenignSAV:                                 E                  TL R      C                                          
gnomAD_SAV:       N  CV FQ#    K G  WN # V RK  R SWCSKI M S V TL S#R    CHKD QSRI  ITK C L  R IR RCA   N   L     *K
Conservation:  6426475531045763420260344335235410432443345546542221447256546333356524215133384365603556864411601761
SS_PSIPRED:    EEE HHHHH              HHHHHHHHHH   EEEEEE             HHHHHHHH  EEEE       EEEE            HHHHHHHH
SS_SPIDER3:    EEE  HH            H   HHHHHHHHHH    EEEEEE             HHHHHHH   EEE     EEEEEE    EE      HHHHHHHH
SS_PSSPRED:    EEE                    HHHHHHHHHHH  EEEEEE               HHHHHHH  EEE      EEEEE            HHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:          D                                                                                                
CARBOHYD:                                                                           N                              

                       10        20        30        40        50        60        70        80        90     
AA:            DMVAEFHDQVPFDGMWIDMNEPSNFIRGSEDGCPNNELENPPYVPGVVGGTLQAATICASSHQFLSTHYNLHNLYGLTEAIASHRALVKARGTRPFVISR 600
PathogenicSAV:             G     # ##Y Y   #               L   R  P    FS       P L K Q  #R  K     M        #    Y#
BenignSAV:                                                                                #        K               
gnomAD_SAV:     V  AL     LNST*V I #S #      NS  #S     #CML MGWW IRV  V  F  R   PQHY #K *SV K LP #KV M  WE #L A PH
Conservation:  2231144115356745458654553117510463031452746271424317111536344241231665455556434304611432232228564544
SS_PSIPRED:    HHHHHHHHH    EEEE                                                      HHHHHHHHHHHHHHHHHHH     EEEE 
SS_SPIDER3:    HHHHHHHH     EEEE    HHH                               EE             HH HHHHHHHHHHHHHH H      EEEE 
SS_PSSPRED:    HHHHHHHHH    EEEE                                                  HHHHHHHHHHHHHHHHHHHHHHHH    EEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                             DDDDDDD  DDDDDD  D                                                        
BINDING:                                                                                                          R
ACT_SITE:                       D  E                                                                               
DISULFID:                                      C                        C                                          

                       10        20        30        40        50        60        70        80        90     
AA:            STFAGHGRYAGHWTGDVWSSWEQLASSVPEILQFNLLGVPLVGADVCGFLGNTSEELCVRWTQLGAFYPFMRNHNSLLSLPQEPYSFSEPAQQAMRKALT 700
PathogenicSAV: #A    D  VD# K#   #       P    R  K  #    R # W#           #          R#                            
BenignSAV:                                 L                                                           K           
gnomAD_SAV:     S   PS*HTS# MEEM#N RK #TA ML   E S MW   IRSEIWS    N      C  HV #  T #W  D   R  K S   RGL  R    TF 
Conservation:  6553528244548575306172452154344427654758358766988012424678367584746696476462110136381254114212341340
SS_PSIPRED:                        HHHHH  HHHHHH                     HHHHHHHHHHHH                      HHHHHHHHHHHH
SS_SPIDER3:             E EEE      HHHHH  HHHHHHH  H                 HHHHHHHHHHH                       HHHHHHHHHHHH
SS_PSSPRED:                        HHHHHHHHHHHHHHHH                  HHHHHHHHHHHHH                     HHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                      D                                                         H                          
DISULFID:                                                    C          C                                          
CARBOHYD:                                                         N                                                

                       10        20        30        40        50        60        70        80        90     
AA:            LRYALLPHLYTLFHQAHVAGETVARPLFLEFPKDSSTWTVDHQLLWGEALLITPVLQAGKAEVTGYFPLGTWYDLQTVPVEALGSLPPPPAAPREPAIHS 800
PathogenicSAV:  #                      W           N     #  #                   # R                                
BenignSAV:               R      I                 N  S                                        I             H      
gnomAD_SAV:     H S  LD  I LY S ITEQ G W  #   #R FNN*AMN  # *R S   N  FP R GK   C  F    NM ML L  F     L V  H  TVY 
Conservation:  2653645355446415410516523543266408104213535567711444374432421030454513174221111111111111111111201306
SS_PSIPRED:    HHHHHHHHHHHHHHHHHH     EE HHH              EEE   EEE        EEEEEE     EEE     EE                EE 
SS_SPIDER3:    HHHH HHHHHHHHHHHHHH   EE EEEE        EEE  EEEE   EEE        EEEEEEE    EEE                      EEE 
SS_PSSPRED:    HHHHHHHHHHHHHHHHH    HHHHHHH             HHHHH  HHHH        EEEEEEE   EEEE                          
DO_DISOPRED3:                                                                                     DDDDDDDDDDD      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                      DDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            EGQWVTLPAPLDTINVHLRAGYIIPLQGPGLTTTESRQQPMALAVALTKGGEARGELFWDDGESLEVLERGAYTQVIFLARNNTIVNELVRVTSEGAGLQ 900
PathogenicSAV:                   P                                                            D                    
BenignSAV:                    I                                                                         L          
gnomAD_SAV:    KRR  P LP# N  SIR WS  #     L F I D H* A  P#   I  E  QRKM * N    A   *    R   # G  M M * LCM    T   
Conservation:  1531104166543534444462445271631451145143307335830140607265665744424332316334161412213131532121132141
SS_PSIPRED:       EEEEE      EEEEE  EEEEE      HHHH    EEEEEEE    EEEEEEEE       EE    EEEEEEEEE  EEEEEEEE       EE
SS_SPIDER3:       EEEEE      EEEEE  EEEE        HHHHH   EEEEEE    EEEEEEEE   E H H E   EEEEEEEEE  EEEEEEEEE      EE
SS_PSSPRED:      EEEEEE     EEEEEE  EEEE       HHHH     EEEEEE    EEEEEEE              EEEEEEEEEE  EEEEEEE        E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                     D      D                                                          
CARBOHYD:                                                                                       N                  

                       10        20        30        40        50  
AA:            LQKVTVLGVATAPQQVLSNGVPVSNFTYSPDTKVLDICVSLLMGEQFLVSWC 952
PathogenicSAV: Q    I      R  F                  P             D   
BenignSAV:                               I                         
gnomAD_SAV:    M       M        CSS L    I   N   V V  L  T Q  FIN  
Conservation:  4113144641018108225311201325113143413031202111612121
SS_PSIPRED:    EEEEEEEE     EEEEE  EE   EEEE    EEEEEEEEE    EEEEE 
SS_SPIDER3:    EEEEEEEE      EEEE  EEEEEEEEE    EEEEEEEE     EEEEEE
SS_PSSPRED:    EEEEEEE       EEEE   E  EEEE     EEEEEEEE     EEEEE 
DO_DISOPRED3:                                                      
DO_SPOTD:                                                          
DO_IUPRED2A:                                                       
CARBOHYD:                              N