P10276  RARA_HUMAN

Gene name: RARA   Description: Retinoic acid receptor alpha

Length: 462    GTS: 9.115e-07   GTS percentile: 0.185     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 145      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MASNSSSCPTPGGGHLNGYPVPPYAFFFPPMLGGLSPPGALTTLQHQLPVSGYSTPSPATIETQSSSSEEIVPSPPSPPPLPRIYKPCFVCQDKSSGYHY 100
gnomAD_SAV:       H  C L  AD#Y S  A    SL  HAVM    L  TV S  Q*   GE  P   S TK        T       AA L# C          A    
Conservation:  2222222222222222222222222222222222221101000020212001000111103223324332213232234335332344322144347334
SS_PSIPRED:                                                                                            EEE         
SS_SPIDER3:                                                                                            EE          
SS_PSSPRED:                                                                                            EEE         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                  
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                  
DO_IUPRED2A:    DDDDDDD D DD                         D               DDDDDDDDDDDDDDDDDDDDDDD                       
DNA_BIND:                                                                                             CFVCQDKSSGYHY
ZN_FING:                                                                                              CFVCQDKSSGYHY
MODRES_P:                                                                                  S                  S    

                       10        20        30        40        50        60        70        80        90     
AA:            GVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEVPKPECSESYTLTPEVGELIEKVRKAHQETFP 200
gnomAD_SAV:     I T        CC        M  Q    L DN  Q H          D    R     #*        NHQ F GHM ML      KR  RVQH    
Conservation:  6342444555334653332323233443232434243344545554554244463345344333233312321114122333423134145444634447
SS_PSIPRED:              HH EEEE   EEE       EEE            HHHHH    HHHHHHHH                   HHHHHHHHHHHHHHHHH  
SS_SPIDER3:      E        EEE  EE EEEEE    E EEE            H HHHH   HHH                           HHHHHHHHHHHHHH H
SS_PSSPRED:                EEEEE   EEEEE     EEE         HHHHHHHHH   HHH                          HHHHHHHHHHHHHHH  
DO_DISOPRED3:  DDD                                    D                  DDDDDDBBBDDDDDDDDDDDDDDDD                 
DO_SPOTD:                                                             DDDDDDDDDDDDDDDDDDDDDDDDDDDD       DDDDDDDDDD
DO_IUPRED2A:                                                              DDDDDDDD D                               
DNA_BIND:      GVSACEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGM                                               
ZN_FING:       GVSACEGC               CHRDKNCIINKVTRNRCQYCRLQKC                                                    
REGION:                                                             SKESVRNDRNKKKKEVPKPECSESYTLTP                  

                       10        20        30        40        50        60        70        80        90     
AA:            ALCQLGKYTTNNSSEQRVSLDIDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA 300
gnomAD_SAV:                             V        S    A  S    D      T                   M     E   I           I   
Conservation:  6432635443235444563554465565566556965647677747779437476999998644867665566435557336856564544456443466
SS_PSIPRED:    HHHH                 HHHHHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHH       EEEE    EEEHHHHHH 
SS_SPIDER3:    HHH                  HHHHHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHHHE     EEEE    EEEHHHHHH 
SS_PSSPRED:    HHHH                 HHHHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHHHHHHHH       EEE    EE HHHHHHH
DO_DISOPRED3:         DDDDDDDDDDD                                                                                  
DO_SPOTD:      DDDDDDDDDDDDDDDDDDD                                                                                 
DO_IUPRED2A:                                                                                          DD           
MODRES_P:                        S                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPHMFPKMLMKITDLRSISAKGAERVITLKM 400
gnomAD_SAV:    A   V      LV    R  I E  M    SV   #  H     L L  #Q      V     W Q  N#SNV     L V   QN  T           
Conservation:  4568564356385244453344445466854669554663775540454266686766763548385622434564354556756455476434324532
SS_PSIPRED:      HHHHHHHHHHHHHHHH    HHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHEEEEEEE
SS_SPIDER3:      HHHHHHHHHHHHH  H    HHHHHHHHHHEHH         HHHHHHHHHHHHHHHHHHHHHH       HHHHH  H  HH   HHHHHHHHEHEE
SS_PSSPRED:       HHHHHHHHHHHHHH     HHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHH       H HHHH HHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                DDD                        DDDD                     D  
MODRES_P:                                                                          S                               

                       10        20        30        40        50        60  
AA:            EIPGSMPPLIQEMLENSEGLDTLSGQPGGGGRDGGGLAPPPGSCSPSLSPSSNRSSPATHSP 462
gnomAD_SAV:                   S      PT PLVDR WEEDSP# L   Y S    N     A    L
Conservation:  34333333534465532421220222210010022222222210110020110210100001
SS_PSIPRED:    E      HHHHHHHH                                               
SS_SPIDER3:    E       HHHHHHH                                               
SS_PSSPRED:           HHHHHHHH                                               
DO_DISOPRED3:                    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MOTIF:                PLIQEMLEN                                              
REGION:           GSMPPLIQEMLENSEG