P11279  LAMP1_HUMAN

Gene name: LAMP1   Description: Lysosome-associated membrane glycoprotein 1

Length: 417    GTS: 1.276e-06   GTS percentile: 0.344     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 4      gnomAD_SAV: 226      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAAPGSARRPLLLLLLLLLLGLMHCASAAMFMVKNGNGTACIMANFSAAFSVNYDTKSGPKNMTFDLPSDATVVLNRSSCGKENTSDPSLVIAFGRGHTL 100
BenignSAV:                                        D                                      P                         
gnomAD_SAV:                        D   WV   VCV   DKR T VTPKL SVL  TCN        ISV  PG  M P C  Y  KTNYN   MV      R 
Conservation:  0000000000000000000120100002111042311212752424130313041101001120302311310000170620111004151317413224
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                        
SS_PSIPRED:           HHHHHHHHHHHHHHH      EEEEEE     EEEEEEEEEEEEEEEE     EEEEEE     EEE              EEEEEE   EEE
SS_SPIDER3:             HHHHHHHHHHH      EEEEEEEE     EEEEEEEEEEEEEEEEE  E EEEEEE     EEE    E         EEEEEE    EE
SS_PSSPRED:           HHHHHHHHHHHHHH       EEEEEE    EEEEEEEEEEEEEEEEE      EEEEE      E               EEEEEE   EEE
DO_DISOPRED3:  DDDDDDDDDDDDDDBBBBDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDD                                                                                           
DO_IUPRED2A:                                                                                D                      
DISULFID:                                              C                                      C                    
CARBOHYD:                                          N       N                N             N       N                

                       10        20        30        40        50        60        70        80        90     
AA:            TLNFTRNATRYSVQLMSFVYNLSDTHLFPNASSKEIKTVESITDIRADIDKKYRCVSGTQVHMNNVTVTLHDATIQAYLSNSSFSRGETRCEQDRPSPTT 200
BenignSAV:                               V                                                                         
gnomAD_SAV:     VD MK   H  IL VN LD  L KY#  SV#FR SNI   V  TG VT   C    CS   IS   IA Y V #PTC YS#   L DSLY RE S #  
Conservation:  1314211010613104140654251017324101000110000000302421526040002001022203223145553023324010226014011322
SS_PSIPRED:    EEEEEE   EEEEEEEEEEEE              EEEEEEE  EEE    EEEEE   EEEE  EEEEEE  EEEEE                      
SS_SPIDER3:    EEEEEE   EEEEEEEEEEEEE              EEEEE E E      EEEE    EEEE  EEEEEEE EEEEEE                     
SS_PSSPRED:    EEEEEE   EEEEEEEEEEEE               EEEE            EE           EEEEEEEEEE                         
DO_DISOPRED3:                                                                                                   DDD
DO_SPOTD:                                                                                        DDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                     D                  DDDDDDDDDDDDDDD
DISULFID:                                                            C                                   C         
CARBOHYD:        N   N             N        N                                  N               N               S TT

                       10        20        30        40        50        60        70        80        90     
AA:            APPAPPSPSPSPVPKSPSVDKYNVSGTNGTCLLASMGLQLNLTYERKDNTTVTRLLNINPNKTSASGSCGAHLVTLELHSEGTTVLLFQFGMNASSSRFF 300
gnomAD_SAV:    VH VS TLLS  MSR     R S RDSS                 KR K#MMKK   V S#  L     STR  I   #TK#I I     R S R  W  
Conservation:  0000031213321211801108141103129457135564334111212111002264171030129191001419060110000506082221211362
SS_PSIPRED:                        EEEE     EEEEEEEEEEEEEEEE     EEEEEEEE     EEEEEE  EEEEEEEEE   EEEEEEEE     EEEE
SS_SPIDER3:                       EEEEE     EEEEEEEEEEEEEEEEE   EEEEEEEEE     EEEEEE  EEEEEEEEE   EEEEEEEE      EEE
SS_PSSPRED:                        EEEEE    EEEEEEE  EEEEEE      EEEEEEE      EEEEEE  EEEEEEEE    EEEEEEEE      EEE
DO_DISOPRED3:  DDDDDDDDDDDDD                                                                                       
DO_SPOTD:      DDDDDDDDDDDDDDDD                                                                                    
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDD                             DDDDDDDD                                          
DISULFID:                                    C                                     C                               
CARBOHYD:            S S S           N    N            N       N           N                               N       

                       10        20        30        40        50        60        70        80        90     
AA:            LQGIQLNTILPDARDPAFKAANGSLRALQATVGNSYKCNAEEHVRVTKAFSVNIFKVWVQAFKVEGGQFGSVEECLLDENSMLIPIAVGGALAGLVLIVL 400
BenignSAV:             T                                                                                           
gnomAD_SAV:     R  R I T T   E    G TS  QV      SC R  # V IH M P    M           V #       P  KS VQ S    S  V    VI 
Conservation:  7124030201001020020104053105132251763711441305110314334163474814022163242470142222467436533723553333
STMI:                                                                                            MMMMMMMMMMMMMMMMMM
SS_PSIPRED:    EEEEEEEE         EEEE     EEEE    EEEE    EEEE   EEEEEEEEEEEEEEE        EE        HHHHHHHHHHHHHHHHHH
SS_SPIDER3:    EEEEEEE          EEE    EEEEEE    EEEE    EEEE   EEEEEEEEEEEEEEE     E  EE        HHHHHHHHHHHHHHHHHH
SS_PSSPRED:    EEEEEEE         HHHH     HHHHH    EEEE    EEEE   EEEEEEEEEEEEEE         EEE        HHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                           DDD  D     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                           C                                    C                         
CARBOHYD:                           N                                                                              

                       10       
AA:            IAYLVGRKRSHAGYQTI 417
gnomAD_SAV:    LP  ASS S PT  HSM
Conservation:  24633535432456433
STMI:          MMMMM            
SS_PSIPRED:    HHHHHHH          
SS_SPIDER3:    HHHHH            
SS_PSSPRED:    HHHHHH           
DO_DISOPRED3:                   
DO_SPOTD:              DDDDD DDD
DO_IUPRED2A: