P11387  TOP1_HUMAN

Gene name: TOP1   Description: DNA topoisomerase 1

Length: 765    GTS: 3.221e-07   GTS percentile: 0.012     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 2      gnomAD_SAV: 157      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSGDHLHNDSQIEADFRLNDSHKHKDKHKDREHRHKEHKKEKDREKSKHSNSEHKDSEKKHKEKEKTKHKDGSSEKHKDKHKDRDKEKRKEEKVRASGDA 100
BenignSAV:                                                                                     Y                   
gnomAD_SAV:               M V  Q I  Y        QK W R N     L  C      R  C           P          RY       Q    IQTF   
Conservation:  3121111000111010101110111110211111021112111111011032102221320221210100431111021102111123112111111130
SS_PSIPRED:                                  HHHHHHHHHHHHHHHHH        HHHHHHHHHHHH       HHH       HHHHHHHHHHHH   H
SS_SPIDER3:                                   HHHHHHHHHHHHH          H HHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHH     
SS_PSSPRED:                                  HHHHHHHHHHHHHHHH           HHHH                       HHHHHHHHH       
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:       S       S                                              S                                           

                       10        20        30        40        50        60        70        80        90     
AA:            KIKKEKENGFSSPPQIKDEPEDDGYFVPPKEDIKPLKRPRDEDDADYKPKKIKTEDTKKEKKRKLEEEEDGKLKKPKNKDKDKKVPEPDNKKKKPKKEEE 200
gnomAD_SAV:    EMRE        LS   #        L   G L      Q  #     #    #  I N R   P    V     SE      EF Q  D          
Conservation:  1124453561211100202001100000000001001210111101022220201001101222011120021231011110110000011022011211
SS_PSIPRED:    HHHHHHH                      HHH                          HHHHH HHHHH                           HHHH
SS_SPIDER3:                                                              HHH    HH                            HHHHH
SS_PSSPRED:                                                                                                     HHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                 S                                                                                        
MODRES_A:                                                                             K                            

                       10        20        30        40        50        60        70        80        90     
AA:            QKWKWWEEERYPEGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNIITNLSKC 300
BenignSAV:                  S                                                                                      
gnomAD_SAV:      G      H A   R      R  I      S      YC  DE T   H T  A #      N      A                V N SV S    
Conservation:  1111253532113326824777378253426454521515262731227410488554676655356464623852886187346741274027117158
SS_PSIPRED:    HHHHHHH                               EEEE  EE    HHHHHHHHHHHHHH       HHHHHHHHHHHHHH           HHH 
SS_SPIDER3:    HHHHHH        E  EE EE E E     EE     EEEE  EEE   HHHHHHHHHHHHH       HHHHHHHHHHHHHHH       E   HHH 
SS_PSSPRED:    HHHH HHHH          EE                EEEEE        HHHHHHHHHHHHH      HHHHHHHHHHHHHHHHH              
DO_DISOPRED3:                                  D                                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_A:                                                                                     K                    

                       10        20        30        40        50        60        70        80        90     
AA:            DFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHK 400
gnomAD_SAV:       R T      M  #  I   K              C                       C                 #       RG TF    L # 
Conservation:  5912431462232445724454354236253324224786825936486666663987555485846865735837525455478843451291681633
SS_PSIPRED:     HHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHH EEEE  EEEEE                            HHHEEEE               
SS_SPIDER3:      HHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHH EEEE  EEEEEE EE                        HHH EEE               
SS_PSSPRED:     HHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHH  EEE                                     EEEEE               
DO_DISOPRED3:                  DDDDDDDDDDDDDD DD                            BBBBBDBBBBDB                          D
DO_SPOTD:                                                                                                          
DO_IUPRED2A:               DD     DDDDD  D                                 DD DDDD   DD               DDD  DDDDDDDD
SITE:                         R                                               R                                    

                       10        20        30        40        50        60        70        80        90     
AA:            WKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETAD 500
PathogenicSAV:                  K                                                                                  
gnomAD_SAV:     R              I  V                           Q#   S H    H G        R                             
Conservation:  9645546369789759385664219854985586577768749784963951162187128105456244315936965669767485676667574379
SS_PSIPRED:       EEE    EEEEEEEE     EEEEEE        HHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHHH            
SS_SPIDER3:      EEE    EEEEEEEEEE    EEEEEE           HHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHHHHH            
SS_PSSPRED:      EEEE   EEEEEEEEE     EEEEE           HHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHH            
DO_DISOPRED3:                                 DDDDDDDDDDDDDDD                                          DDDDDDDDDDDD
DO_SPOTD:                                                                                                DDDDDDD   
DO_IUPRED2A:   DDD                                                                                         D       
SITE:                     W                              K                                                         
REGION:                                KY                                                             RAGNEK       

                       10        20        30        40        50        60        70        80        90     
AA:            TVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQ 600
gnomAD_SAV:                S   G#H                    R          V        A        S             D                 
Conservation:  8879997558842760123412359778969985656382549332754552263238221628863735105864931461787777868696835662
SS_PSIPRED:      EEEEEEEEEEEEE       EEEEEEE      EEEEEEE  HHHHHHHHHHH              HHHHHHHHHHH    HHHHHHHHHHHHHHHH
SS_SPIDER3:    EEEEEEEEEEEEE         EEEEEEE     EEEEEEEE  HHHHHHHHHHH        HH     HHHHHHHHH   HHHHHHHHHHHHHHHHHH
SS_PSSPRED:     EEEEEEEEEEEEE        EEEEEEE     EEEEEEEE  HHHHHHHHHHHH              HHHHHHHHHHH  HHHHHHHHHHHHHHHHH
DO_DISOPRED3:  DD                                                     BBBBBBBDDDDDDD                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
SITE:          T                              K                                         N                          
REGION:                                                                                            TAK             
MODRES_P:           S                                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            QLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMK 700
gnomAD_SAV:      E   SS   N   M                            I M         L   VQ EV   R  S II     N  A     V  S G     
Conservation:  6722651123423255647658655543577987536545346522541453153164115303531521212001212121144132314343365513
SS_PSIPRED:    HHHH       HHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HH    HHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHH        HHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHH   HHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHH        HHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                 DDDDDDD                                 DDDDDDDDDD                   
DO_SPOTD:                                                                             DDD D                        
DO_IUPRED2A:                                         DDDDDDDDD              DD      D D              D             
SITE:                                         H                 K                                                  

                       10        20        30        40        50        60     
AA:            LEVQATDREENKQIALGTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF 765
gnomAD_SAV:      F     K                     S   NCV  #         DR          V   
Conservation:  41244543454544676554544657555456534116434444233343453622112212314
SS_PSIPRED:    HHHHHHHHHHHHHH           HHHHHHHHHHH   HHH   HHHHHH HHHH         
SS_SPIDER3:    HHHHHHHHHHHHHHH           HHHHHHHHHH   HHH   HHHHHHHHHHHH        
SS_PSSPRED:    HHHHHHHHHHHHHH             HHHHHHHHH   HHHH HHHHHHHHHHHHH        
DO_DISOPRED3:              DDDDDDDDDDDDDDDDDDD        DDDDDDDDDDDDDDDDDDD       
DO_SPOTD:                                                                       
DO_IUPRED2A:    DD D    D D                                                     
ACT_SITE:                            Y