P11473  VDR_HUMAN

Gene name: VDR   Description: Vitamin D3 receptor

Length: 427    GTS: 2.436e-06   GTS percentile: 0.791     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 19      BenignSAV: 3      gnomAD_SAV: 210      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEAMAASTSLPDPGDFDRNVPRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEV 100
PathogenicSAV:                                 D Q         EDI  Q                      Q      Q                    
BenignSAV:                                                               I                                         
gnomAD_SAV:    TKTVTV PF SG#  L QSM#L S    E*  AL  D VA  S  A   * I Q TP IW      CV #G QC        C   VS T K M     #
Conservation:  1100000010010110321244122345434353333234434345424334252123173413141543236547566844653245323446473153
SS_PSIPRED:                         EEE                      HH        EEE     EEEE HHHHH       HHHHHH   HHH   HHHH
SS_SPIDER3:                          EEEE         EE EE       EEEEEEE  EEE     EE   HHHHH  H    HHHHH    H     HHHH
SS_PSSPRED:                            EE        EE         HHHHHH     EEEE     EE  HHHHH    HH HHHHHH         HHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDBBBBB               DDD DDD                                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDD                                                              D D      DDDDDDDDDDD
DO_IUPRED2A:     DDD      D                                                                                        
DNA_BIND:                          PRICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILT    
ZN_FING:                              CGVCGDRATGFHFNAMTCEGC               CPFNGDCRITKDNRRHCQACRLKRC                
REGION:                                                                                                        DEEV

                       10        20        30        40        50        60        70        80        90     
AA:            QRKREMILKRKEEEALKDSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSHPSRPNSRHTPSFSGDSSSSCSDHCITSSDMMDSS 200
gnomAD_SAV:       W    QL   A S  N Q    K   C  V   ET     #SN       WT    K C  R    H  I  LR   N   C * D  A    INLT
Conservation:  1347123145115252321111154147213612741661364523722612655312111110100001121011110112111001112231111300
SS_PSIPRED:    HHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHH                                            HHHHH    HHHH   
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHH                                                               
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHH                                                HHH         
DO_DISOPRED3:      BBBDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD       DDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDDD DDD   DD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:      DDDDDD DDD    DDDDDD                                    DDDDDDDDDDDDDDDDDDDDDD   D   DDD         
BINDING:                                                 Y                                                         
REGION:        QRKREMILKRKEEEALKDSLRPKLSE                                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            SFSNLDLSEEDSDDPSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDV 300
PathogenicSAV:                                                                          #                          
BenignSAV:                                  V                                                                      
gnomAD_SAV:    I  K   N K#TEGRF     P     L V         N T      RR  E  AD EL#   T  T     C      T     N  SKV  *CIG M
Conservation:  0111111111111011000110023272544453865445773758164173281456863799565466226358239222322628811232712253
SS_PSIPRED:                      HHHHHHHHHHHHHHHHHHHHHHHHHHHH    HHH  HHHHHHHHHHHHHHHHHHHHHHH      EEE      EEEHHHH
SS_SPIDER3:                        H H  HHHHHHHHHHHHHHHHHHHH     HHH  HHHHHHHHHHHHHHHHHHHHHHHEE    EEEE     EE HHHH
SS_PSSPRED:                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHH  HHHHHHHHHHHHHHHHHHHHHH        EE       EE  HH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDD                                                                               
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD                                                                               
DO_IUPRED2A:    DDDDDDDDD  D  D DD                                                                                 
REGION:                                  LPHLADLVSYS                                 IMLRSNES                      

                       10        20        30        40        50        60        70        80        90     
AA:            TKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQ 400
PathogenicSAV:     Q        S              K             C  M             P                              #     P   
BenignSAV:                                                                  I                                      
gnomAD_SAV:             VK  S        V           D  VA  GH VM  TT TK#T  HP SI *M  LGH LHRD  P   RV  R  N H         
Conservation:  2245521154324444703653628333544544555747642334222116412641351372246112321221234444342144334341122224
SS_PSIPRED:    HH    HHHHHHHHHHHHHHHH    HHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    HH    HHHHHHHHHHHHHHHH    HHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:    HH   HHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:           H                                                                                           H   

                       10        20       
AA:            YRCLSFQPECSMKLTPLVLEVFGNEIS 427
gnomAD_SAV:      S FI        R  L     D   
Conservation:  231511123202132623063230111
SS_PSIPRED:    HHHHH          HHHHHHH     
SS_SPIDER3:    HHHHH          HHHHHHH     
SS_PSSPRED:    HHHHH          HHHHHHH     
DO_DISOPRED3:                           DD
DO_SPOTD:                                 
DO_IUPRED2A:                              
MOTIF:                        PLVLEVFGN