P11940  PABP1_HUMAN

Gene name: PABPC1   Description: Polyadenylate-binding protein 1

Length: 636    GTS: 5.897e-07   GTS percentile: 0.068     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 128      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGN 100
gnomAD_SAV:       N  T            L                                           A       V   AV      L    H     R  A  
Conservation:  8112221232343435344434445453435432624344433351123234231326541313484996879665556575879998788496789598
SS_PSIPRED:               EEEEE       HHHHHHHH       EEEEEEE     EEEEEEEE   HHHHHHHHHHH   EE  EEEEEEEE   HHHHH     
SS_SPIDER3:               EEEEE       HHHHHHHH      EEEEEEEE    EEEEEEEE    HHHHHHHHHH   EEE  EEEEEEEEE  HHHHH    E
SS_PSSPRED:               EEEE        HHHHHHHHHH    EEEEEEE         EEEE    HHHHHHHHHHH       EEEEEEEE   HHH      E
DO_DISOPRED3:  DDDDDDDD                                                                                            
DO_SPOTD:      DDDDDDD                                                                                             
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGE 200
gnomAD_SAV:           R     T                  A                    T           CR    Q   #EK  T    K        VR    
Conservation:  5868667368668597586868958695686464388575788656845682265245584463437888647975458638265662387877597723
SS_PSIPRED:    EEEE       HHHHHHHHHHH  EEEEEEEE     EEEEEE    HHHHHHHHHHH   EE  EE EEEE   HHHHHHHHHHHHHH  EEEEE    
SS_SPIDER3:    EEEEE      HHHHHHHHHH     E EEEEE    EEEEEEE   HHHHHHHHHH    EE  EEEEEE    HHHHHHHHH HHH  EEEEEEE   
SS_PSSPRED:    EEEE       HHHHHHHHHH    EEEEEEE      EEEEE    HHHHHHHHHHHH      EEEEEE    HHHHHHHHHHHHHH  EEEEE    
DO_DISOPRED3:                                                                                DDDDDDDDD             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN 300
gnomAD_SAV:        G      V   R       IG                      AN   R   S  H    Q  R L W A       E        N D       
Conservation:  4344218422911672349669738117246599986733656745861265735328404566699862976199555854467372244554768576
SS_PSIPRED:       HHHHHHHHHHH  EEEEEEEE       EEEEEE   HHHHHHHHHHH   EE  EEEEEEE   HHHHHHHHHHHHHHHHHHHHHH     EEEE 
SS_SPIDER3:       HHHHHHHHHH   EEEEEEEE     EE EEEE    HHHHHHHHHHH   EE  EEEEEEE   HHHHHHHHHHHHHHHHHH H      EEEEE 
SS_PSSPRED:       HHHHHHHHHH    EEEEEEE         EEE    HHHHHHHHHHH       EEEEEE    HHHHHHHHHHHHHHHHHHHHHH    EEEEE 
DO_DISOPRED3:                                                                      DDDDDDDDDDDDDD                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                 DDDDD                      DDDD                       
MODRES_M:                                                                                                        K 

                       10        20        30        40        50        60        70        80        90     
AA:            LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPY 400
gnomAD_SAV:        V   C W    S    N    IL   C       S     K    I      T         SV               R       I     SH 
Conservation:  7662636549355845592887677744444978997799757579568758588585668878877984785568595465456344354422323223
SS_PSIPRED:          HHHHHHHHH    EEEEEEE        EEEE    HHHHHHHHHHH   EE     EEEE   HHHHHHHHHHHHHHHHHH            
SS_SPIDER3:          HHHHHHHH   EEEEEEEE  E  EE  EEE E   HHHHHHHHHHH   E   EEEEEEEE  HHHHHHHHHHHHHHHHHH            
SS_PSSPRED:          HHHHHHHH     EEEEEEE         EEE    HHHHHHHHHHH   EE  EEEEEHHHH HHHHHHHHHHHHHHHHHH            
DO_DISOPRED3:                                                                                 DDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    DDDD                DD   DDDDDDDDDDD   D   DDDDDD  
MODRES_P:                    S   T                                                                                 
MODRES_M:                                                                                          R               

                       10        20        30        40        50        60        70        80        90     
AA:            QPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAAAAAA 500
gnomAD_SAV:     QS     L       P  T  C   H           #     LS     S  #         SV   A  I       L        V  HLT T#S 
Conservation:  4224333535453452224213423322322331335223224220311221212211542122223224343521121322222425223211222111
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                   H H  
SS_PSSPRED:                   HHH                                                                           HHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:          DDDD          DDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_M:                        R            R   R                  R    R              R     R           R       

                       10        20        30        40        50        60        70        80        90     
AA:            ATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESP 600
gnomAD_SAV:           IT      R   T           K     R   H                      W   F * T  #                     K L
Conservation:  2221111112345222332212122153111303323132535597433743443226644454354444111420574664757755655667346532
SS_PSIPRED:                                                  HHHHH   HHHHHHHHHHHHHHHHHHH HHHHHHHHEEEE   HHHHHHHH  H
SS_SPIDER3:                                                  HHHHHH  HHHHHH HHHHHHHHHHHH HHHH   EEEEEEE HHHHHHHHH H
SS_PSSPRED:                                               H HHHHHH   HHHHHHHHHHHHHHHHHHH HH   HHHHEEEE  HHHHHHHH  H
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                              
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                         
DO_IUPRED2A:   DD       DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDD                         D   DDDDD
MODRES_M:           R           R                                                                                  
MODRES_A:                 K                                                                                        

                       10        20        30      
AA:            ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV 636
gnomAD_SAV:     L C   E             S#  T  NV S  I 
Conservation:  366125242432332123112021100022222222
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHHHH        
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHHHHHH         
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHH          
DO_DISOPRED3:                   DDDDDDDDDDDDDDDDDDD
DO_SPOTD:                          DDDDDDDDDDDDDDDD
DO_IUPRED2A:   D      DDDD  DD  D   D DDDDDDDDDDD