P12830  CADH1_HUMAN

Gene name: CDH1   Description: Cadherin-1

Length: 882    GTS: 1.305e-06   GTS percentile: 0.358     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 22      BenignSAV: 45      gnomAD_SAV: 451      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGPWSRSLSALLLLLQVSSWLCQEPEPCHPGFDAESYTFTVPRRHLERGRVLGRVNFEDCTGRQRTAYFSLDTRFKVGTDGVITVKRPLRFHNPQIHFLV 100
PathogenicSAV: #                                                                                                   
BenignSAV:      SR                          T                                Q        N                       V    
gnomAD_SAV:     SR R #V # P    F # V     S  R       K        D S  Q GA   E  SQ   #C   N P#N     M I R # Q Q  *M    
Conservation:  4000000000000000000010001112010100111100101001001011212030121110011101111220100121211101200000000103
STMI:          SSSSSSSSSSSSSSSSSSSSSS                                                                              
SS_PSIPRED:      HHHHHHHHHHHHHHHHHHH             EEEEEEEEHHH     EEEEEE         EEEEE     EE    EEEE EEEEE    EEEEE
SS_SPIDER3:      HHHHHHHHHHHHHHHHHHH              EEEEEEEHHH    EEEEEE HHH     EEEEEE    EEE     EEE   EEEE   EEEEE
SS_PSSPRED:        HHHHHHHHHHHHHHHH              EEEEEEE HHH      EE EE        EEEEE     EEE   EEEEEE EEE     EEEEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDD                                                                               
DO_SPOTD:      DDDDDDDDDDDDDDD                                                                                     
DO_IUPRED2A:                                                                                                       
PROPEP:                              QEPEPCHPGFDAESYTFTVPRRHLERGRVLGRVNFEDCTGRQRTAYFSLDTRFKVGTDGVITVKRPLRFHNPQIHFLV

                       10        20        30        40        50        60        70        80        90     
AA:            YAWDSTYRKFSTKVTLNTVGHHHRPPPHQASVSGIQAELLTFPNSSPGLRRQKRDWVIPPISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTP 200
BenignSAV:      T                          H              S                                                        
gnomAD_SAV:    HSR    G    E M I  RQDQHSQ YH  I   R   F  HD  R PG H          S   KR SI  K       NNI   I   V     N# 
Conservation:  0212102110100213100000010000000000000010022001032241673522523112651352471041144430210014152647275611
SS_PSIPRED:    EEEE    EEEEEEEEEE                   HH               EE                 EEEEEEE       EEEEEEE      
SS_SPIDER3:    EEE     EEEEEEEEEE                   H             E        EE          EEEEEEEE      EEEEEEEE      
SS_PSSPRED:    EEE     EEEEEEEEEE                  HHH                                   EEEEE       EEEEEEE       
DO_DISOPRED3:                      DDDDDDDDDDDDDDD     D      D                                                    
DO_SPOTD:                            DDDDDDDDDDDD                                                                  
DO_IUPRED2A:                    DDDDDDDDDDDDDD                         D  D D D    D  DDDDDDD          DDDDD       
PROPEP:        YAWDSTYRKFSTKVTLNTVGHHHRPPPHQASVSGIQAELLTFPNSSPGLRRQKR                                              
DISULFID:                                                                    C                                     

                       10        20        30        40        50        60        70        80        90     
AA:            PVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQNDNKPEFTQEVFKGSVMEGALPGTSVMEVTATDADDDVNTYNAAI 300
PathogenicSAV:                                       R    G         # KV                                           
BenignSAV:      I                     C                                             A                           T  
gnomAD_SAV:    RI#A T#K        K      CT A     Y    H   I  L     MII       K   Q   RA   S V RI  T  I   T N     STGV
Conservation:  9133815320490515321777711225050235122220034164342617294998281822026060707320131153251839294112215534
SS_PSIPRED:        EEEE    EEEE          EEEEEEEEE          EEEEEEEE             EEEEE        EEEEEEEE          EEE
SS_SPIDER3:       EEEE      EEE          EEEEEEEEE     E    EEEEEEEE        E   EEEEEE        EEEEEEEE          EEE
SS_PSSPRED:       EEEEE     EEE          EEEEEEEEE          EEEEEEEEE            EEEEE        EEEEEEEE         HHHH
DO_DISOPRED3:                                                          DDDDDDDDD                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                DDDDDDDDDD    DDDDDD            D DDDDDDDDDD           
METAL:                                                                 D                              D            
CARBOHYD:                                                                                     S    T               

                       10        20        30        40        50        60        70        80        90     
AA:            AYTILSQDPELPDKNMFTINRNTGVISVVTTGLDRESFPTYTLVVQAADLQGEGLSTTATAVITVTDTNDNPPIFNPTTYKGQVPENEANVVITTLKVTD 400
BenignSAV:                                            A                                L             SK   IN       
gnomAD_SAV:    T A    NLGI    V  VSS    T M I RQ *    #    IRT  FR     I  R E S # S    L  S PM E H   KK  IIN A     
Conservation:  2815126181040105716410481715111387541121727141848319062131426351516284428181100203061862331162250538
SS_PSIPRED:    EEEEEE          EEEE    EEEE           EEEEEEEEE        EEEEEEEEEE            EEEEEEE      EEEE EEE 
SS_SPIDER3:    EEEEEE         EEEEE    EEEEE     H    EEEEEEEEEE       EEEEEEEEEE EE    EE    EEEEEE     EEEEEEEE E
SS_PSSPRED:    EEEEE            EEE    EEEEE          EEEEEEEEE          EEEEEEEEE            EEEEE      EEEEEEEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:               DDDDD                                           DDDD  DDD   DDDDDDDDDD            DDD   
CARBOHYD:                                                               T                                          

                       10        20        30        40        50        60        70        80        90     
AA:            ADAPNTPAWEAVYTILNDDGGQFVVTTNPVNNDGILKTAKGLDFEAKQQYILHVAVTNVVPFEVSLTTSTATVTVDVLDVNEAPIFVPPEKRVEVSEDFG 500
PathogenicSAV:                                        N                                              A             
BenignSAV:             R                       #                                    I  I    P                   A  
gnomAD_SAV:    #  SDI VRK   NTFSA DR   I    GKK# V   T# S  A NE NL  I  M   T   P  A I  IAMA  N      #  L  TAQ   A  
Conservation:  1811262350627162161121815153112438462625386771121316152617222421131367747270816377572614011030117321
SS_PSIPRED:            EEEEEEEE      EEEE       EEEEEE         EEEEEEEEEE           EEEEEEEEEE     EE   EEEEEEE    
SS_SPIDER3:            EEEEEEE      EEEEE      EEEEEEE  E      EEEEEEEEEE           EEEEEEEEEE     E     EEEEEE    
SS_PSSPRED:            EEEEEEEE      EEEEE      EEEEEE    HHH  EEEEEEEEEE           EEEEEEEEEE           EEEEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:              D           D                                                                        DD  
CARBOHYD:                                                                           T T                            

                       10        20        30        40        50        60        70        80        90     
AA:            VGQEITSYTAQEPDTFMEQKITYRIWRDTANWLEINPDTGAISTRAELDREDFEHVKNSTYTALIIATDNGSPVATGTGTLLLILSDVNDNAPIPEPRTI 600
PathogenicSAV:                                                            R       R  S                 I           
BenignSAV:                D                                                         D                     T        
gnomAD_SAV:    M    A# ##    A   K MIH#    A    G  LY  V F #  # T   Q MR  M A Q L  E   SF S          V S DT  S  Q M
Conservation:  2410520428164611104332514016132361321235151311065333002313226253425264401035747443516144675282312101
SS_PSIPRED:       EEEEEEEE          EEEE       EEE     EEEE               EEEEEEEEEE      EEEEEEEEEEE             E
SS_SPIDER3:       EEEEEEEE         EEEEEE     EEEEE    EEEE               EEEEEEEEEE     EEEEEEEEEEEEE            E
SS_PSSPRED:      EEEEEEEEE         EEEEEE     EEEE     EEEEE              EEEEEEEEEE      EEEEEEEEEEEEE            
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:      DD    D D                        D      DDDDDDD  D                                           D DD
CARBOHYD:              T                                                N           N     T T T                    

                       10        20        30        40        50        60        70        80        90     
AA:            FFCERNPKPQVINIIDADLPPNTSPFTAELTHGASANWTIQYNDPTQESIILKPKMALEVGDYKINLKLMDNQNKDQVTTLEVSVCDCEGAAGVCRKAQP 700
PathogenicSAV:                                                                            E                        
BenignSAV:                     T            V               A                                      M       S R     
gnomAD_SAV:              D  F# T    H       Q  R GTS   *  NSA Q T      G KM  C# H  F#  KY N L    IGMY   ETTSI   #K 
Conservation:  0271113111041525152222315404040112112423110111021314031103114051505131511111322131404326150300700000
SS_PSIPRED:    EE          EEE          EEEEE       EEEEE     EEEEEE       EEEEEEEEEE         EEEEEEE              
SS_SPIDER3:    EEE      EEEEEE          EEEEE        EEEEE   EEEEEEEE  E   EEEEEEEEEEE      EEEEEEEEEE      EE   EE
SS_PSSPRED:    EEE       EEEEE          EEEEE       EEEEE     EEEEE         EEEEEEEEE         EEEEEEE              
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                DD          DD                                                                         
SITE:                                                                                                             P
CARBOHYD:                           N              N                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            VEAGLQIPAILGILGGILALLILILLLLLFLRRRAVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDARPEVTRNDVAPTLMSVPRYLPR 800
PathogenicSAV:                                Q                         K                                          
BenignSAV:      K        V                                                                                        H
gnomAD_SAV:    LK  F   S V F E  I#V      F    L #V  R #  A  #  QG # CC   A R      N     G# ETQ DAIH  IV IF# #SQ   H
Conservation:  0013102213333454353552332443230333001212232332114434424343336622211233142243121312122121311111302223
STMI:                   MMMMMMMMMMMMMMMMMMMMM                                                                      
SS_PSIPRED:          HHHHHHHHHHHHHHHHHHHHHHHHHHH                  EEE              HHH                             
SS_SPIDER3:          HHHHHHHHHHHHHHHHHHHHHHHHH  H                  EEE                                             
SS_PSSPRED:          HHHHHHHHHHHHHHHHHHHHHHHHHHHH                  EE                                              
DO_DISOPRED3:                                    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                      DDDDDDDDDDDDDDD            DDDDDDD        DDDDDDDDDDDDDDDD          
DO_IUPRED2A:                                           DDD    DDDDDDDDDDD     DDDDDDDDDD      D  D D        DDD DD 
REGION:                                                                 EGGGEEDQDFDL                               
SITE:          V                             LR                 DN                                                 
MODRES_P:                                                          YYY              S                      S       

                       10        20        30        40        50        60        70        80  
AA:            PANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEAASLSSLNSSESDKDQDYDYLNEWGNRFKKLADMYGGGEDD 882
BenignSAV:         N                                G                                        SK  
gnomAD_SAV:    A D NKM KL  D  NVT I   VL *    M     GS K #I   P   DL    H  H  KCDSH R M  R R RKNN
Conservation:  3113233013402121324141132402232143143123121242221311221323421311231221223423221233
SS_PSIPRED:         HHHHHHHHHHHHHH          EEEE                          HHH    HHHHHHHHHH      
SS_SPIDER3:         HHHHHHHHHHHHH           EEEE  E                          HHH HHHHHHHHHH      
SS_PSSPRED:             HHHHHHHHH          EEEEE                                 HHHHHHHHHH      
DO_DISOPRED3:  DDD                                DDDDDDDDDDDDDDDDDDDDDDDDDBDDDDDDDDDD D     DDBB
DO_SPOTD:                                            DDDDDDDDDDDDDDDDDDD                    DDDDD
DO_IUPRED2A:           DDDDDDDD DDDDDDD DDDDDDDDD       DDDDDDDDDDDDDDDDDDDD              DD  DDD
MODRES_P:                                           S S     S