P14867  GBRA1_HUMAN

Gene name: GABRA1   Description: Gamma-aminobutyric acid receptor subunit alpha-1

Length: 456    GTS: 5.344e-07   GTS percentile: 0.054     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 30      BenignSAV: 7      gnomAD_SAV: 105      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDE 100
PathogenicSAV:                                                                                          #          
BenignSAV:        N    E                                                                                           
gnomAD_SAV:       I  VTESP  RMF P I NA  C  S FK  I ED I          G       T   A   K N      G       G    V    C      
Conservation:  6210101011333212121121234236262355356777799799979999999999999999694979997999777777767999999999979499
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                         
SS_PSIPRED:        HHHHHHHHHHHHHHHHHH          HHHH  HHHHHHHHHHHH               EEEEEEEEEEE         EEEEEEEEEEEE   
SS_SPIDER3:          HHHHHHHHHHHHHH HHH        HHH     HHHHHHHHH                EEEEEEEEE E        EEEEEEEEEEEEE   
SS_PSSPRED:         HHHHHHHHHHHHHHH                    HHHHHHHHHHH              EEEEEEEEEEE          EEEEEEEE      
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                             
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                               
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                           N                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            RLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTR 200
PathogenicSAV:            Q                                 MQ                                                     
BenignSAV:                                                   W                                                     
gnomAD_SAV:             I      T           R         TA S    W     I                       T         F         A   
Conservation:  9979999947999999999799999999799999999999999979996979799999977777676567667676676779766679994699493996
SS_PSIPRED:    HH       EEEE HHHHHH      EEE     EEEE     EEEEE     EEEEEEEEEEEE                EEEEE EE HHHEEEEE  
SS_SPIDER3:      E      EEE  HHHHHH     EEEEE   EEEEEE    EEEEE     EEEEEEEEEEEEE   HHH          EEEEEEE   EEEEEEE 
SS_PSSPRED:             EEEE HHHHHHH              EE      EEEEEE    EEEEEEEEEEEE                 EEEEE   HHHEEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                       C             C                    
CARBOHYD:                                           N                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            EPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA 300
PathogenicSAV:              #I   N                               #           #   F       K           L  M   II R R 
gnomAD_SAV:    G  H      A          R   G  V    I      SI      N  *     S                    I             IK      
Conservation:  7753997997999799999979959466767999979799676969999999999999999799999979777799999999999979999999999779
STMI:                                                             MMMMMMMMMMMMMMMMMMMMMM     MMMMMMMMMMMMMMMMMMMMMM
SS_PSIPRED:         EEEE    EE  EEEEEEEEEEEEEEE  EEEEEEEEEEEEEE   HHHHHHHHHHHHHHHHHHHHH       HHHH      HHHHHHH HHH
SS_SPIDER3:       EEEEE     EE EEEEEEEEEEEEEEEE  E EEEEEEEEEEEEE   HHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHH HHH
SS_PSSPRED:        EEEE         EEE  EEE  EEEEE    EEEEEEEEEEEE   EEEHHHHHHHHHHHHHHHHHH          EEEEE   HHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                               W                           

                       10        20        30        40        50        60        70        80        90     
AA:            RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPLIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEV 400
PathogenicSAV: K    T D   T N       D  L                                                                           
BenignSAV:                     T                               M                                    V              
gnomAD_SAV:                                         S K             #  A  S    #S *S      NL     N# VS   R  A     A
Conservation:  9799999797999979779977999999797776676677467744463474729515465445665652454355764554556675535464234371
STMI:                      MMMMMMMMMMMMMMMMMMMMMM                                                                  
SS_PSIPRED:    H       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                                             
SS_SPIDER3:    H       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                                 E           
SS_PSSPRED:    HH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                                            
DO_DISOPRED3:                                              DDDDDDDDDDDDDDD                DDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                               D            DD                     DDDD

                       10        20        30        40        50      
AA:            KPETKPPEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ 456
BenignSAV:                                                  G          
gnomAD_SAV:    #SQR  S SR S     I         L    V        H       QTS#S P
Conservation:  64525666577667766777646796976477466776755695446253201142
STMI:                               MMMMMMMMMMMMMMMMMMMMMM             
SS_PSIPRED:                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHH       
SS_SPIDER3:                    HHHHHHHHHHHHHHHHHHHHHHHHHHH   HH        
SS_PSSPRED:                     HHHHHHHHHHHHHHHHHHHHHHHHHH             
DO_DISOPRED3:  DDDDD                                             DDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDD                                  DDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDD                                  DDDDDDDD