P15509  CSF2R_HUMAN

Gene name: CSF2RA   Description: Granulocyte-macrophage colony-stimulating factor receptor subunit alpha

Length: 400    GTS: 1.607e-06   GTS percentile: 0.495     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 7      gnomAD_SAV: 260      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNT 100
BenignSAV:                     G                                                         G                         
gnomAD_SAV:     F  A  FP  G  Y G       LVV*   #PC  #M LHC M   RCN  KSR       SG  KG M S  C  K L  #C  Y RKR ISD  M  
Conservation:  0000100101102101010000000000100003213311201001314120000010000000000000000000100030000011112202040100
STMI:          SSSSSSSSSSSSSSSSSSSSSS                                                                              
SS_PSIPRED:     HHHHHHHHHHHHHHHHHH                 EEEEE   EEEEEE       EEEEEE     EEEEE     EEEEEEEEE    EEEEEEEE 
SS_SPIDER3:       HHHHHHH    HHHHH         E       EEEEE  EEEEEEE      EEEEEEEE     EEEE     EEEEEEEEEE   EEEEEEEE 
SS_PSSPRED:      HHHHHHHHHH   HHHH                   EEE   EEEEEE        EEEEE               EEEEEEEEE    EEEEEEEE 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDD  D                                                                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                   N       N                                            N 

                       10        20        30        40        50        60        70        80        90     
AA:            SQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSRE 200
PathogenicSAV:                                                                                                R    
BenignSAV:                                              L            Q        Q                                    
gnomAD_SAV:    # I     Q  S * MDC P H   W   DV  I   RV#SLM  H IH  S T*    K#A Q  CNM*Y*  Y EY  Y V R R HSFY#  R  #V
Conservation:  0100110010201020113231351914321014152502511230332322212010010002710501201121371311310000001415332211
SS_PSIPRED:        EEEEEEE          EE EEEEE      EEEE         EEEEEEE      EEE   EEE    EEEEEE        EEEEEEE     
SS_SPIDER3:        EEEEEEE          HEEEEEEEE E EEEE  E       EEEEEEEEE     EEE   EEEE  EEEEEEE EEEE EEEEEEEEEE    
SS_PSSPRED:        HHHHHH            EEEEEEE       E           EEEEEEE             EEE    EEEE         EEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                               C         C                            C            C                      
CARBOHYD:                            N           N                                              N            N     

                       10        20        30        40        50        60        70        80        90     
AA:            IGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAAD 300
gnomAD_SAV:    L V LS  VS A    *SKT  I  EC KMMRYIIW NEL A    L    H H  I  R  * AM  R    PSNWD   # T  G TTR R#N GVT 
Conservation:  0032111001020132110461141201210010404115111000000130624031020000010100001020000020211100111104233412
SS_PSIPRED:          EEEEE HH         EEEEE    EEEEEE         EEEEEEEEEEE        EEEEEEEE   EEEEEEE      EEEEEEEE  
SS_SPIDER3:      E EEEEEE   EE E      EEEEEE  EEEEEEE         EEEEEEEEEEEE       EEEEEEEE   EEEEEEE      EEEEEEEE  
SS_PSSPRED:          HHH              EEEEE   EEEEEEE           EEEEEEEE         EEEEEEEE   EEEEE         EEEEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                            N     N                                          N                            

                       10        20        30        40        50        60        70        80        90     
AA:            VRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT 400
BenignSAV:                           S         M                                                                   
gnomAD_SAV:    F  FS I CNKTTKC#CNNR #S G  F F  MAIFFYVFIVS P  S P # Q  L   RT        Q  GK  S DL L  V   HK    M  V 
Conservation:  0000025143121041011000000010212112121122210223121000112221341211010100100000000000000000000000000000
STMI:                              MMMMMMMMMMMMMMMMMMMMMMMMMM                                                      
SS_PSIPRED:                EE          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH        HHH         EEHH           EEEEEEEE  
SS_SPIDER3:                EEE          HHHHHHHHHHHHHHHHHHHHHH  H HHHH        HH            HE          EEEEEEEEE  
SS_PSSPRED:                EE         EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHH           HHH          EEEEEEEE  
DO_DISOPRED3:                                     DD                                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:              WSSWS                                            LFPPVPQIK                                     
CARBOHYD:          N