P15863  PAX1_HUMAN

Gene name: PAX1   Description: Paired box protein Pax-1

Length: 534    GTS: 1.353e-06   GTS percentile: 0.379     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 8      gnomAD_SAV: 322      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MKFTLGLGSRAWRVSWEGAAAAAAGPGAGGSALRCRAQRVSSPRLGRRGSRLSGALPLCLSRGGGGAQALPDCAGPSPGHPGHPGARQLAGPLAMEQTYG 100
BenignSAV:                                        G                                                                
gnomAD_SAV:             QV                    VP  G  C          F  *  FS    H   A P PR     R D  RY  S    CL P  #MH 
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111113257
SS_PSIPRED:      EEE     EEEE HHHHHHHH        HHH                                                                  
SS_SPIDER3:       E      EE E     HHHH         HHH                                                         H       
SS_PSSPRED:      EEE     EEEE  HHHHHHH                                                                             
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     
DO_IUPRED2A:                                   DD         D DD                      DDDDDDDDDDDDDDDDDDDDDD DD      
DNA_BIND:                                                                                                       TYG

                       10        20        30        40        50        60        70        80        90     
AA:            EVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRL 200
PathogenicSAV:                                                                  V                                  
gnomAD_SAV:    G  *   M L  H M  V   L    E   V L  T       Q     F # FKD      R  #   #CI S K  E  W     A       V  Q 
Conservation:  7777699677776679565736767977576777767696666764697554676769967997677677679794997599299337995777979979
SS_PSIPRED:           EEE  EE  HHHHHHHHHHHH      HHHHHHH    HHHHHHHHHH                   HHHHHHHHHHHHH   HHHHHHHHHH
SS_SPIDER3:           EEE  EE  HHHHHHHHHHHH      HHHH H     HHHHHHHH           E         HHHHHHHHHHH    HHHHHHHHHHH
SS_PSSPRED:                    HHHHHHHHHHHHH     HHHHHHH    HHHHHHHHHHH                  HHHHHHHHHHHH      HHHHHHHH
DO_DISOPRED3:  DDDDDDBBD                                                                                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                   DDD    DD  DDDDDD                   
DNA_BIND:      EVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRL

                       10        20        30        40        50        60        70        80        90     
AA:            LADGVCDKYNVPSVSSISRILRNKIGSLAQPGPYEASKQPPSQPTLPYNHIYQYPYPSPVSPTGAKMGSHPGVPGTAGHVSIPRSWPSAHSVSNILGIRT 300
BenignSAV:                                 S                                                                       
gnomAD_SAV:     D     TF         H  C R R# S R#L#KPR  SL  #   #  M   S   SM SKS# K N #R ## T QI  ASL LL QLAIH  D  K
Conservation:  9465696567676664556677976934332231620631233335655643511533323134462222442322332323441657295845688564
SS_PSIPRED:    HH           HHHHHHHHHHH                                                                            
SS_SPIDER3:    HH             HHHHHHHH                                                                    H      E 
SS_PSSPRED:    HHH          HHHHHHHHHHHH                                                                           
DO_DISOPRED3:                             DDDDDDDDDDDDDDDDDDDDDD   DDDD   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:              DDDDDDDD D     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                 DDDDDDDDDDDDD D DDD            DDDDDDDDDDDDDDDDDDDD  D                
DNA_BIND:      LADGVCDKYNVPSVSSISRILRNK                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            FMEQTGALAGSEGTAYSPKMEDWAGVNRTAFPATPAVNGLEKPALEADIKYTQSASTLSAVGGFLPACAYPASNQHGVYSAPGGGYLAPGPPWPPAQGPP 400
BenignSAV:                          N                                                    E                         
gnomAD_SAV:    L# PA V GRR SAT  LQKKNR D S#R L # RELK    S     V  P   FIR V#A   SSRG  SP#EQ#M RSASSSSH   RR L # #L#
Conservation:  6454111012112302133123211211111102000111221013111220111012223222321213112232122211112212122222121111
SS_PSIPRED:                     HHHHHHH         HHHH  HH HHHH    EEE                                               
SS_SPIDER3:                       HH  H                                                      E                     
SS_PSSPRED:                       HHH            HHHHHHH                                                           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDD DDDDDDDD D                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:           DDDDDDD  DDD D    DDD DDDDDDDDD  DDDD DDD                               DDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            LAPPGAGVAVHGGELAAAMTFKHPSREGSLPAPAARPRTPSVAYTDCPSRPRPPRGSSPRTRARRERQADPGAQVCAAAPAIGTGRIGGLAEEEASAGPR 500
BenignSAV:                                           R             L                                               
gnomAD_SAV:      #A SS    #R  VS     PR G E  L #  K      V  #   W  LS    SLALT  KL  E         LVVR D MR PP V  GP#R 
Conservation:  2212111111101121121142001111111111111111111111111111100101111111111111111111100011110011111111111111
SS_PSIPRED:                                                                   EEE               EE        HH       
SS_SPIDER3:           E         HH                                                       E                 HHH     
SS_PSSPRED:                                                                                              HHHH      
DO_DISOPRED3:  DDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   D DDDDDDDDDDDDDDD

                       10        20        30    
AA:            GARPASPQAQPCLWPDPPHFLYWSGFLGFSELGF 534
BenignSAV:        L  L                           
gnomAD_SAV:    VSCL  LLS LS #S  # L  CTRL   F  # 
Conservation:  1111111111111111111111111111111111
SS_PSIPRED:                     HHHHH      HHH   
SS_SPIDER3:                       HH H      HH   
SS_PSSPRED:                                      
DO_DISOPRED3:  DDDDDDDDDDDDDD                    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDD