P15918  RAG1_HUMAN

Gene name: RAG1   Description: V(D)J recombination-activating protein 1

Length: 1043    GTS: 2.052e-06   GTS percentile: 0.672     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 50      BenignSAV: 17      gnomAD_SAV: 516      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAASFPPTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKTPEEAQKEKKDSFEGKPSLEQSPAVLDKADGQKPVPTQPLLKAHPKFSKKFHDNEKARGK 100
BenignSAV:                                                                                        R              S 
gnomAD_SAV:    V   LS  #  NA#SGD R#L       R  V#W# #  N #    E  TVF# E  PRVR L APH    R    NRA    RAM  N  QN G VSS 
Conservation:  9111012002222353433343245446658566444225130202001100011111311020100010111111011031121211211001131231
SS_PSIPRED:                   HHH        HH  EEEE        HHHHH           HHH HHHHH                           HHHHHH
SS_SPIDER3:                   HHH          H EEEEE        HHHHHHH            HHHHH                        H   HHHHH
SS_PSSPRED:                             HHHHHHHHEEE       HHH                 HHHH                        HHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDD D     DDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  
DO_IUPRED2A:       DDDDDDDDDD DD                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDD DDD

                       10        20        30        40        50        60        70        80        90     
AA:            AIHQANLRHLCRICGNSFRADEHNRRYPVHGPVDGKTLGLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHNCWSIMHRKFSSAPCEVYFPRNV 200
PathogenicSAV:            C                                                                                        
BenignSAV:                                                            V            L                       K       
gnomAD_SAV:    # R VSVQ   H    YS VV# # # SGR SM     V  Q NK      LE   R  Q NL     WTY  D F  S G I  T II  YKF  Q DM
Conservation:  1282118416996990152220122143655266214203786564432398456355845694392644694199529813324435223222233221
SS_PSIPRED:    HHHHHHHHHHHHH                     HHHHHHHHHH      HHHHHHHHH               HHHHHHHHHHHHH     EEEE    
SS_SPIDER3:    HHHHHHHHHHHHH     EE     EE       HHHHHHHHH       HHHHHHHHH        H      H HHHHHHHHHH      EEE     
SS_PSSPRED:    HHHHHHHHHHHHHH                    HHHHHHHHHH      HHHHHHHHHHH                HHHHHHHHH       EE     
DO_DISOPRED3:                                       D                                                              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:    D                      DDDDDD       DDD D                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            TMEWHPHTPSCDICNTARRGLKRKSLQPNLQLSKKLKTVLDQARQARQHKRRAQARISSKDVMKKIANCSKIHLSTKLLAVDFPEHFVKSISCQICEHIL 300
BenignSAV:                                              R G VH R                                                   
gnomAD_SAV:     TQ*QS# L  NV D VHQ H     L    VN E  N F RT   GER #  *    NNE R   TS T K  G  F   H SQY   FV  H   #  
Conservation:  2229259420904910111228832011212129416111201210300213111122210224123192219842235324591274064493694978
SS_PSIPRED:                                     HHHHHHHHHHHHHH    HHH     HHHHHHHH                 HHHHHHHHHHH HHHH
SS_SPIDER3:      EE       H H                           HHHHH HHHHH HHH  HHHHHHHHHH        H HHE   HHHHHHHHHHHHHHH 
SS_PSSPRED:                                             HHHHHHH    HHH   HHHHHHHHHH         EE     HHHHHHHHHHHHHHHH
DO_DISOPRED3:                    DDDDDDDDDDDDDDDDDDD   DDDD DDDDDDDDDDD                                            
DO_SPOTD:                      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                         
DO_IUPRED2A:                                              D     DDDDDD                                             
METAL:                                                                             C   H                   C  C H  
ZN_FING:                                                                                                   CQICEHIL

                       10        20        30        40        50        60        70        80        90     
AA:            ADPVETNCKHVFCRVCILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSVLNSLMVKCPAKECNEEVSLEKYNHHISSHKESKEIFVHINKGGRPRQHLL 400
PathogenicSAV:              W             Y                                                                 # #    
BenignSAV:      E                                                                                  T               
gnomAD_SAV:     EH DI   Q    #    Y  I DN    GG  F  P   G L  L  I   MTM FL#E YSKG N K C LD    E    T #Y   R   C R  
Conservation:  3696643939659629625422448239939123615245128363841582381629622491426143352291229220020222367999996899
SS_PSIPRED:             HHHHHHHHHHHHHHH             HH    HHHHHHHHHHHHH         EE HHHHHHHHHH                  HHHH
SS_SPIDER3:            HHHHHHHHHHHHHHHH         E  HHHH  HHHHHHHHHHH   E        EE HHHHHHHHH        EEE       HHHHH
SS_PSSPRED:            HHHHHHHHHHHHHHHH                   HHHHHHHHHHHH         HHHHHHHHHHHHH          E        HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                      D
DNA_BIND:                                                                                                 GGRPRQHLL
METAL:                C H  C  C           C  C                          C    C           H   H                     
ZN_FING:       ADPVETNCKHVFCRVCILRCLKVMGSYCPSCR                     LMVKCPAKECNEEVSLEKYNHHISSHKESK                 

                       10        20        30        40        50        60        70        80        90     
AA:            SLTRRAQKHRLRELKLQVKAFADKEEGGDVKSVCMTLFLLALRARNEHRQADELEAIMQGKGSGLQPAVCLAIRVNTFLSCSQYHKMYRTVKAITGRQIF 500
PathogenicSAV: P  W     #                  G   M V        V         Q                   #     G                    
BenignSAV:                                                     K                                                   
gnomAD_SAV:    L SQ     W G     IR  S       M    V       KV I  K   D  D#     C   L      C   # G       F IE TV    T 
Conservation:  6989999989974891687398779969947799689689689728997598999846596924926899999979999998999969998984797989
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHH   HHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHH      
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHH       HHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHHHHHHH      
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHH  HHHHHHHHHHHH       HHHHHEHHHHHHHHHHHHHHHHHHHHHH      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                      DDDDDDD                                          
DNA_BIND:      SLTRRAQKHRLRELKLQVKAFADKEEGGDVKSVCMTLFLLALRARNEHRQADELEAIMQ                                         

                       10        20        30        40        50        60        70        80        90     
AA:            QPLHALRNAEKVLLPGYHHFEWQPPLKNVSSSTDVGIIDGLSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKE 600
PathogenicSAV:       W              C                                    S #                                       
BenignSAV:                             S                                                                           
gnomAD_SAV:    ET    Q  KN#F L    S CKSS      N       E   I F L   A  IT NS H    FL   I I  V   ATKF VFN *        M  
Conservation:  9998699469839899652969395944983244569679668421467725368857999994867576786874653954212445412478383799
SS_PSIPRED:      HHHHHHHHH                      EEHHHHHH           HHHHHHHH HHHHHHHHHH HHHHHHHHHHH    HH    EEEEEE 
SS_SPIDER3:      HHHHHHHH                     H HHHHHH             HHHHHHH HH HHHHHH   HHHHHHHHHHH       E  EEEEEEE
SS_PSSPRED:     HHHHHHHHHHHH                       EHHHH            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH         EEEEEEE
DO_DISOPRED3:  DDDD DDDD DD                                                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SCDGMGDVSEKHGSGPVVPEKAVRFSFTIMKITIAHSSQNVKVFEEAKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKSSELMLELGGILRT 700
PathogenicSAV:                        #                                            #                             W 
gnomAD_SAV:    P      MGQ   T  LAL  T H    V   I T      Q        P       Y    E T Y K   L  A V  KVT  NG SV      FQ 
Conservation:  7999999959999499368996997989693643012121316949179999779797796779978995896683956699357427292635574282
SS_PSIPRED:           HHHH           EEEEEEEEEEEEE    EEEEEE      HHH   EEEEEE    HHHHHHHHHHHHHHHHHHHH HHHHH      E
SS_SPIDER3:           H HH           EEEEEEEEEEEEEE  EEEEEE      H H    EEEEEEE   HHHHHHHHHHHHHHHHHHH  EEEEEE  EE E
SS_PSSPRED:                         EEEEEEEEEEEEE      EEEEE           HHHHHH      HHHHHHHHHHHHHHHHHHH HHHHHHH     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:           DDDDDD                                                                                      
METAL:           D                                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            FKFIFRGTGYDEKLVREVEGLEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESVEELRDRVKGVSAKPFIETVPSIDALHCD 800
PathogenicSAV:                #     K              H         P     L                      W #                      
gnomAD_SAV:                  MQ   D K      VFS Y VNH QGF    C #V  RR D V #  I #  R   P GKR#N#    *    #K           
Conservation:  8361998899999769759989899938799899669269739365957995917883999499599649546499499997869896964666999997
SS_PSIPRED:    EEEEE      HHHHHHH        EEEEE      HHHHHHHHHHHH    HHHHHHHHH         HHHHHHHH              HHHHH  
SS_SPIDER3:    EEEEE      HHHHHHH        EEEEEEE   HH H    EEEEE   HHHHH HHHH         HHHHHHH                HHHH  
SS_PSSPRED:    EEEEE      HHHHHHHH       EEEE      HHHHHHHHHHHH    HHHHHHHHH           HHHHHH                      
DO_DISOPRED3:                                                                        D                             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                   D                                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            IGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHLRKKMNLKPIMRMNGNFARKLMTKETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSC 900
PathogenicSAV:                                         W             #                             R           Q   
BenignSAV:                        R                                                           K      N             
gnomAD_SAV:    V       RV   D#E L R  T     STM  SAM  L QEEI   ATRKL D  D   I # I  SI K*   K   K  K PTNP     Q  *   
Conservation:  9989499777995996836131344766763964399657943457996476699789789629655679985252595349468638954979999664
SS_PSIPRED:      HHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHH                  HHHHHHHHHHH   HHHHHHHHHHHHHHHH   EE    
SS_SPIDER3:       HHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHH      E         E  HHHHHHHH     HHHHHHHHHHHHHHH  E EEE   
SS_PSSPRED:      HHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHH    HHH    HHHH  HHHHHHHHHH   HHHHHHHHHHHHHHHH         
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                               DDDD                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSK 1000
PathogenicSAV:            C                                                            C #     P          E        
gnomAD_SAV:        S D P    S   H  #I  M S H   VE AH L  I     D    Y  TW *TTDE    K    #LW         C TK   E#R#     
Conservation:  9357885378789779949966864285799386999979988899997799799999999999996999999999989999927968979999999999
SS_PSIPRED:      HH  HHH       HHHHHHH  EEE         HHHHHHH   HHHH    HHHHH    HHHHHHHHHHHH  HHH     HHHHHHHHHHHHHH
SS_SPIDER3:          HHH       HHHHHHH  EEEE E       HHHHH HHHHHHH       EH     HHHHHHHHH          EEHHHHHHHHHHH HH
SS_PSSPRED:         HHHHH     HHHHHHHHH    EE      HHHHHHHHHHHHHHH                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                  DDDDD   DDDDD                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                                                         E                                   

                       10        20        30        40   
AA:            YLQKFMNAHNALKTSGFTMNPQASLGDPLGIEDSLESQDSMEF 1043
gnomAD_SAV:    CF*  V# Y        I# S  N   # AV G   C E V  
Conservation:  5996894693226211202232111200100312341122133
SS_PSIPRED:    HHHHHHHHHHHHHH                             
SS_SPIDER3:    HHHHHHHHHHHHHH                             
SS_PSSPRED:    HHHHHHHHHHHHHHH                            
DO_DISOPRED3:               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                          DDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                              DDDDD