P16234  PGFRA_HUMAN

Gene name: PDGFRA   Description: Platelet-derived growth factor receptor alpha

Length: 1089    GTS: 8.868e-07   GTS percentile: 0.175     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 12      BenignSAV: 25      gnomAD_SAV: 463      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGTSHPAFLVLGCLLTGLSLILCQLSLPSILPNENEKVVQLNSSFSLRCFGESEVSWQYPMSEEESSDVEIRNEENNSGLFVTVLEVSSASAAHTGLYTC 100
BenignSAV:                                                            T                      D                     
gnomAD_SAV:       #LT#  D  Y PSV    FG   F #T  Y D    RQ   L       N #T R      VR NM     # S S  MM  AA   LVVQ      
Conservation:  1111101121111111111001000015040810142440222332529170114191111111000000000010113122326140153403870818
STMI:          SSSSSSSSSSSSSSSSSSSSSSS                                                                             
SS_PSIPRED:        HHHHHHHHHHHHHHHHHH      EE      EEE     EEEEEE  EEEEEE           EEEE      EEEEEEEE    HHH EEEEE
SS_SPIDER3:        HHHHHHHHHHHHHHHHHH      EE     EEEE    EEEEEE E  EEEEE             EEE     EEEEEEEE    HHH EEEEE
SS_PSSPRED:         HHHHHHHHHHHHHHHHH             EEEE    EEEEEEE EEEEEEE                      EEEEEEE       EEEEEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDD                                              DD                           
DO_SPOTD:      DDDDDDDDDDDDDDDDDD                                                                                  
DO_IUPRED2A:                                                                  DDDDDDDDDD                           
DISULFID:                                                      C                                                  C
CARBOHYD:                                               N                                 N                        

                       10        20        30        40        50        60        70        80        90     
AA:            YYNHTQTEENELEGRHIYIYVPDPDVAFVPLGMTDYLVIVEDDDSAIIPCRTTDPETPVTLHNSEGVVPASYDSRQGFNGTFTVGPYICEATVKGKKFQT 200
gnomAD_SAV:    C # I  K  G             H        MES   LA# # VV   CA G K      K   M#  FHHG R    N  A   V  S IE  TI S
Conservation:  0300100100011121446686951228431001401232010411376945748131748222100401072221951505113282935122412207
SS_PSIPRED:    EE      EEEEEEEEEEEEE       EE      EEEE    EEEEEE        EEEEE        EE    EEEEEE  EEEEEEEE  EEEEE
SS_SPIDER3:    EEE         EEEEEEEEE      EE       EEEEE   EEEEEEE       EEEEE        E EE  EEEEEE  EEEEEEEE  EEEEE
SS_PSSPRED:    EEE          EEEEEEEE       E      EEEEEE    EEEEEE       EEEE               EEEE  EEEEEEEEEE  EEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    DDDDDDD  DDDDDDDD                                  
DISULFID:                                                       C                                      C           
CARBOHYD:        N                                                                           N                     

                       10        20        30        40        50        60        70        80        90     
AA:            IPFNVYALKATSELDLEMEALKTVYKSGETIVVTCAVFNNEVVDLQWTYPGEVKGKGITMLEEIKVPSIKLVYTLTVPEATVKDSGDYECAARQATREVK 300
BenignSAV:         I               F                                              T                                
gnomAD_SAV:        I  F VA AVVI  Q F       QM L  R A #TKMI       EKE    F # Q  # SF T   SSM  KSM   G   K G H  AG IT
Conservation:  1163532312110413251414434329636262936042545140914931011101112221111001414271430522244918191502110201
SS_PSIPRED:    EEEEEEE        EEE    EEEE   EEEEEEEEE     EEEEE        EEEEEEEEE   EEEEEEEEE    HHH EEEEEEEEE    EE
SS_SPIDER3:    EEEEEEEEE        E    EEE    EEEEEEEEE     EEEEE       EEEEEEEEE    EEEEEEEEEE       EEEEEEEE     EE
SS_PSSPRED:    EEEEEEEE              EEEE   EEEEEEEEE     EEEEE            EEEE    EEEEEEEEEE       EEEEEEEEE      
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                          D            
DISULFID:                                        C                                                      C          

                       10        20        30        40        50        60        70        80        90     
AA:            EMKKVTISVHEKGFIEIKPTFSQLEAVNLHEVKHFVVEVRAYPPPRISWLKNNLTLIENLTEITTDVEKIQEIRYRSKLKLIRAKEEDSGHYTIVAQNED 400
BenignSAV:                                            Q                          M      S Q                        
gnomAD_SAV:    A   IAV A   A         H   LSPY        LQ   T T      Y         L   M   E  S Q IV   C   #N  YF  A E   
Conservation:  1021417282524540302011003242533421515041669161509266303411012323211112264551418386954224171844160534
SS_PSIPRED:    EEEEEEEEEE   EEEEE      EEE     EEEEEEEEE     EEEEE          EEE  EEEEE EEEEEEEEEE   HHH EEEEEEEE   
SS_SPIDER3:    EEEEEEEEEE   EEEEE      EEEE   EEEEEEEE       EEEEE   E       E E EEEEEEEEEEEEEEEEE  HHH EEEEEEEEE  
SS_PSSPRED:    EEEEEEEEEE    EEEE     EEEEE   EEEEEEEEE      EEEEE                EE  EEEEEEEEEE          EEEEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                          N     N                                         

                       10        20        30        40        50        60        70        80        90     
AA:            AVKSYTFELLTQVPSSILDLVDDHHGSTGGQTVRCTAEGTPLPDIEWMICKDIKKCNNETSWTILANNVSNIITEIHSRDRSTVEGRVTFAKVEETIAVR 500
BenignSAV:     D                        D             M                                     P                      
gnomAD_SAV:    D    I        P   Y  NH Y LSRV MM  I G M F H   IM NY   F I    A    #  HS MA  PQN   MKSC S TT   A TM 
Conservation:  2002138071535541622617224122125152914381919050634823223721120101510303210220001101150616150142212253
SS_PSIPRED:      EEEEEEEEEE    EEE           EEEEEEEE EE  EEEEEEE            EE     EEEEEEEE    EEEEEEEEEEE    EEEE
SS_SPIDER3:    EEEEEEEEEEEEE  EEE            EEEEEEE      EEEEEE             EEE   EEEEEEEE    EEEEEEEEEEE E   EEEE
SS_PSSPRED:      EEEEEEEEEE                  EEEEEEEE      EEEE              EE      EEEEEE      EEEEEEEE E    EEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                               DDDDDDDD                                                                
DISULFID:                                        C                                                                 
CARBOHYD:                                                               N         N                                

                       10        20        30        40        50        60        70        80        90     
AA:            CLAKNLLGAENRELKLVAPTLRSELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRVLG 600
PathogenicSAV:                                                       C                     S                       
gnomAD_SAV:         P R A     M S I HT  MATV    QFM  V  FTA  FV* E  K   H      V L         L     N        E    QA  
Conservation:  9141702401144546432222444353535647645253444796457469989999868986673596697968955866632993477285874398
STMI:                                      MMMMMMMMMMMMMMMMMMMMM                                                   
SS_PSIPRED:    EEEEE   EEEEEEEEE        HHHHHHHHHHHHHHHHHHHHHHHHH    HHHEEEEEEE                                 EE 
SS_SPIDER3:    EEEE     EEEEEEEE      HHHHHHHHHHHHHHHHHHHHHHHHHHH       EEEEEE E      EEEE H H          HH     EEEE
SS_PSSPRED:    EEEE     HHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHEEEE                                    
DO_DISOPRED3:                                                                                            DBBDDDDDDD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                                                                                                         LG
MODRES_P:                                                                             Y Y                          
DISULFID:      C                                                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFLSHHPEK 700
PathogenicSAV:                                                          A               I                          
BenignSAV:                                   S                                                                     
gnomAD_SAV:           I   T A R#  S L        SM S     S        S    Q              S     DH  C   AK       N  NQ    
Conservation:  9999968856454363243534586565744688599769979998997999886866867789862874555895844989675974753473201254
SS_PSIPRED:         EEEEEEE         EEEEEEE      HHHHHHHHHHHHHHH          HHHHH     EEEEEEE   HHHHHHHHH HHHHH      
SS_SPIDER3:          EEEEE E        EEEEEEEE     HHHHHHHHHHHHHH        EEE HHH       EEEEE      HHHHHHH HHH        
SS_PSSPRED:          EEEEEEE         EEEEEE      HHHHHHHHHHHHH         EEEHHHHH      EEEEE     HHHHHHHHHH          
DO_DISOPRED3:                                                                                                    DD
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                D DD   
NP_BIND:       SGAFGKV                                                                                             
BINDING:                                 K                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            PKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLLSFTY 800
BenignSAV:                                                S                R  C                                    
gnomAD_SAV:     R DVGVS  DAT  N W S        D  # T    I R IST   QDF  HPNF SPRCEHT  CR   V    A  F      KDF        # 
Conservation:  1212012321211121124333342524768788453512186684431213584464231613522321111120201123461132175227856456
SS_PSIPRED:       HH              EEEEE                         EEE                      HHHHHHHH         HHHHHHHHH
SS_SPIDER3:      HHHH             EEE        E                   E                        HHHHHH          HHHHHH HH
SS_PSSPRED:      HHHH                                                                                     HHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD             
DO_SPOTD:                 DDDDDD        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD              
DO_IUPRED2A:       DDDDD                                                                                           
MODRES_P:                         Y          Y          Y           Y       Y     Y                                

                       10        20        30        40        50        60        70        80        90     
AA:            QVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM 900
PathogenicSAV:                                         K   Y   C   D                                               
gnomAD_SAV:       Q        H   C      I   R  TM           TR L  AL A     MR                      V       F  N   S  
Conservation:  8774864786457977777777777656765679999799977659599766746779667699697956667636675765574564577755889654
SS_PSIPRED:    HHHHHHHHHH      HHHHHHHEEEE   EEEE HH                           HHHH      HHHHHHHHHEEEEHH           
SS_SPIDER3:    HHHHHHHHHH       HHHH EEEEE  EEEEE       HH      E       EEEE          E    H  EEEEEEEEEE           
SS_PSSPRED:    HHHHHHHHHH      HHHHHHHHHHH   EEEEE                        E                   E EEEEEEEE           
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
ACT_SITE:                       D                                                                                  
MODRES_P:                                                      Y                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            VDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDHPAVARMRVDSDNAYIGVTYKNEEDKL 1000
BenignSAV:                                                                                                       N 
gnomAD_SAV:       I   Q RN *L    G       DM         Q        N        #H     KE RV L #      SCV#A   KVC# I N  DK NV
Conservation:  6552994778385873481453134854815974444749939129411441792217753714432394575868527220012100032111112112
SS_PSIPRED:      HHHHHHHH            HHHHHHHHHHH   HHH   HHHHHHHHHHH  HHHHH EE   HHH                          HHH  
SS_SPIDER3:      HHHHHHHH   E        HHHHHHHHHH          HHHHHHHHHHH     HHHHHH  H H                          HHHHH
SS_PSSPRED:      HHHHHHHH           HHHHHHHHHHHH         HHHHHHHHHHH  HHHHHHHHHHH                                  
DO_DISOPRED3:                                                               D  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                      D
MODRES_P:                                                                                             Y            

                       10        20        30        40        50        60        70        80        9
AA:            KDWEGGLDEQRLSADSGYIIPLPDIDPVPEEEDLGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDSSDLVEDSFL 1089
BenignSAV:                                     V                  M                       M             
gnomAD_SAV:       K        IT     VL   MGLA K  VPAEK KP L    Q  L M C  TN T   GKI# GVN TGNVC E#   A   I 
Conservation:  21123211322123365989877752511011111213326312252342423222123111421112112101112232132155542
SS_PSIPRED:                      EEE                                                            HHHHH   
SS_SPIDER3:    HHH     H         EEE        HHHH            H                                      E    
SS_PSSPRED:                      EE                                                                     
DO_DISOPRED3:  DDDDDDDDDDDDD D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDD        DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   D  DDDD      D       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDDDDDD           
MODRES_P:                       Y