P17405  ASM_HUMAN

Gene name: SMPD1   Description: Sphingomyelin phosphodiesterase

Length: 631    GTS: 2.805e-06   GTS percentile: 0.871     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 112      BenignSAV: 19      gnomAD_SAV: 394      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MPRYGASLRQSCPRSGREQGQDGTAGAPGLLWMGLVLALALALALALALSDSRVLWAPAEAHPLSPQGHPARLHRIVPRLRDVFGWGNLTCPICKGLFTA 100
PathogenicSAV:                                                                                           H  W      
BenignSAV:                                     I  A                                        M       R               
gnomAD_SAV:    IRL R#     * SYCQKRR GR  RGLRF GI#VM E VP PP  Q  AVC   R  E  QL  S#DY V  QSVMTQ #  ## RYF  SV #  LA 
Conservation:  6321423222323122223221321213013222222222221002112101111111313142200202103020211111033426367226424733
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                      
SS_PSIPRED:                              HHHHHHHHHHHHHHHHHHHHHH     EEE  HH         HHHHHHHHHHHHHHH       HHHHHHHHH
SS_SPIDER3:                              HHHHHHHHHHHHHHHHHHHHHH    EEEE E H          HHHH HHHHHHHH        HHHHHHHHH
SS_PSSPRED:                                 HHHHHHHHHHHHHHHHHHH     EEE             HHHHHHHHHHHHHH        HHHHHHHHH
DO_DISOPRED3:  BBBBBBBBBBBBBBBBBBBBBBBBB                                                                           
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDD                                                                          
DO_IUPRED2A:             DDDDDDDDDDD D                                                                             
DISULFID:                                                                                                C  C      
CARBOHYD:                                                                                             N            

                       10        20        30        40        50        60        70        80        90     
AA:            INLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPKPPPKPPSPPAPGAPV 200
PathogenicSAV:     P                          A      P                   R   P    R         N       L           P  
BenignSAV:                                                                                           S             
gnomAD_SAV:    VS W#RN LS #CM  M     IRR    LTM  PM Y LQN IM    H L RR  TR      I  N N  L# YNY L  L LS NT  LS   PLI
Conservation:  4424531326233530452138116356220893355378419451552294838384755438218724754427756771256735276055255573
SS_PSIPRED:    HHH        HHHHHHHHHHHHHH    HHHHHHHHHHHH  HHHHHHHH   HHHHHHHHH      HHHHH EEE                      
SS_SPIDER3:    HH        EHEHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHH     EHEH  EE                     E
SS_PSSPRED:    HHH           HHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHH       EEEEE                         
DO_DISOPRED3:                                                                                     DDBDBBDBBBBBBB   
DO_SPOTD:                                                                                         DDDDDDDDDDDDD    
DO_IUPRED2A:                                                                                      DDDDDDDDDDDDD    
DISULFID:                           C          C                         C       C                                 
CARBOHYD:                                                                                  N                       

                       10        20        30        40        50        60        70        80        90     
AA:            SRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVWHQTRQDQLRALTT 300
PathogenicSAV:  C        R    R          #R #   D        VR C## R  # S  I                     A FT        K K      
BenignSAV:                                            Q                                                       Q    
gnomAD_SAV:     C         Y E   DM#     RP  #WS   LST Q   RH*SQFR  H  P      * EV TVS   VL    N TTY  CD NC  KQWT N 
Conservation:  3646467756562281274242822888871231041124128939646548676538434582253224454369989979987693968249915824
SS_PSIPRED:     EEEEEEE    HHH                                        HHHHHHHHH         EEEE     HHHHHHHHHHHHHHHHHH
SS_SPIDER3:    EEEEEEEEEE    H                                 H      HHHHHHHH         EEEEEE    HHHHHHHHHHHHHHHHHH
SS_PSSPRED:    EEEEEE                                                 HHHHHHHHH         EEEEE     HHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                D H                                                                     D                    
DISULFID:                            C    CC                      C                                                

                       10        20        30        40        50        60        70        80        90     
AA:            VTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFCSRENFWLLINSTD 400
PathogenicSAV:    P         MH  MR Y   A      R          #               D         C   S    #  PF IS R   # #       
BenignSAV:     I                E     I                                                                            
gnomAD_SAV:    I #PMK       M LV RD    A     SH V DSY #H*   V     #L*  SK  H  GT      F FL FCF   S    YC#  G     M 
Conservation:  6529433466252668668657438664686844266164197923862372077621661567159676323157997579866784148697668578
SS_PSIPRED:    HHHHHHHHH                              HHHHHHHHHHHH     HHHHHHEEE  EEE       EEEEEE        EEEEEE   
SS_SPIDER3:    HHHHHHHH   E EE                 H      HHHHHHHHHHH      HHHHHHEEE  EEE      EEEEEEEE       EEEEE    
SS_PSSPRED:    HHHHHHHHH                              HHHHHHHHHHHH     HHHHHHHHH  EEEE     EEEEEEE        EEEEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                               DDD                                                                     
METAL:                            N                                                                                
DISULFID:                                                                                            C             
CARBOHYD:                                          N                                                           N   

                       10        20        30        40        50        60        70        80        90     
AA:            PAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSATTYIGLNPGYRVY 500
PathogenicSAV:               V       #  SR     #P  CR         C   PDV   D      S   S      #L    L E R A N S I S # N
BenignSAV:                                                                                           V             
gnomAD_SAV:    AT#      R  HTV  Q    RV  R  R YR    N    *T G NKSN T#     N  G #      D   WL      ERRV S #SF    L H
Conservation:  9657869941595279225769757979995367338856663652776655369999989395975989525466755686549969875298985878
SS_PSIPRED:     HHHHHHHHHHHHHHHHH   EEEEEE           EEHHHHHHHHH HHHHHHH      EEEEEE        EEEEEE    EEEEEE    EEE
SS_SPIDER3:    HHHHHHHHHHHHHHHHH   EEEEE  E           HHHHHHHHHHHHHHHHH     E EEEEEE HHHH   EEHHEE     EEEEE   EEEE
SS_PSSPRED:       HHHHHHHHHHHHHHH  EEEEEE             HHHHHHHHHHHHHHHHHH      EEEEEE HHH   HHHHEEE     EEEE     EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                                   H                               H H                                       
DISULFID:                                      C                                                                   

                       10        20        30        40        50        60        70        80        90     
AA:            QIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQLS 600
PathogenicSAV:                QV CLRS  H         R   H         K P      P      Y      L     NS                  R  
BenignSAV:           GR F M                             Q                                             M            
gnomAD_SAV:         CPRIFQM V LDN*V  MI   VLA TQ    FC  ** CR SH    T  SVI HIW#NVK  RN       S  TL   AKH H       IF
Conservation:  3489282277428886555768793690212081815994844573412259333519422621622398289652578993134902286332683745
SS_PSIPRED:    EE       EEEEEE  EEEEEHHH        HHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHHHH              HHHHHHHHHH
SS_SPIDER3:    EE        EEEEEE EEEEE HE        HHHHHHHHHHH       HHHHHHHHHH  H HHHHHHHHHHH              HHHHHHHHHH
SS_PSSPRED:    EE        EEEEE   EEEEE          HHHHHHHHHHHH       HHHHHHHHHHH  HHHHHHHHHHHH            HHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                                           C   C     C    
CARBOHYD:          N                N                                                                              

                       10        20        30 
AA:            ARADSPALCRHLMPDGSLPEAQSLWPRPLFC 631
PathogenicSAV:  #                             
BenignSAV:         G       I                  
gnomAD_SAV:    TCT #    H  I    FS  #  CQ     
Conservation:  5622361381130100212011113122238
SS_PSIPRED:    H     HHHHHH      HHHHHH       
SS_SPIDER3:         HHHHHHH      H HHHH    EEE
SS_PSSPRED:    H    HHHHHH       HHHHHH       
DO_DISOPRED3:                                 
DO_SPOTD:                                     
DO_IUPRED2A:                                  
DISULFID:              C