P18827  SDC1_HUMAN

Gene name: SDC1   Description: Syndecan-1

Length: 310    GTS: 5.895e-07   GTS percentile: 0.068     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 6      gnomAD_SAV: 179      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MRRAALWLWLCALALSLQPALPQIVATNLPPEDQDGSGDDSDNFSGSGAGALQDITLSQQTPSTWKDTQLLTAIPTSPEPTGLEATAASTSTLPAGEGPK 100
BenignSAV:                                                                   F    M       M     S                  
gnomAD_SAV:                      L    TLP H S  N*    N  #SS S #T     T  L  I FNC YA#  MTVLM Q A S       S   L RAA#R
Conservation:  2000000000000000000000111122236334545333221365573322110222010111110111322221010211120100000223011111
STMI:          SSSSSSSSSSSSSSSSSSSSSS                                                                              
SS_PSIPRED:     HHHHHHHHHHHHHHH  HH   HHH    HHH                                                                   
SS_SPIDER3:    HHHHHHHHHHHHHHHH      HHHH                                                                          
SS_PSSPRED:     HHHHHHHHHHHHHHHHHHHHHHHHHH                                                                         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CARBOHYD:                                          S     N S S                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            EGEAVVLPEVEPGLTAREQEATPRPRETTQLPTTHLASTTTATTAQEPATSHPHRDMQPGHHETSTPAGPSQADLHTPHTEDGGPSATERAAEDGASSQL 200
BenignSAV:                    T                   Q                                                                
gnomAD_SAV:    Q      S  DR F TW R  I QL  A RFL I Q PK I  M    VA QLY  I A Y   LS  ELR  G  S RIDNR S T VKVT #  F R 
Conservation:  1110112121121121001211012112111424112104232211121210101110320111103112001011011121111123101211100121
SS_PSIPRED:        EE                                                                                  EE          
SS_SPIDER3:         E                                                                                              
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PAAEGSGEQDFTFETSGENTAVVAVEPDRRNQSPVDQGATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ 300
gnomAD_SAV:    LVT#D   R  S   LE       MDS H# HFS NRE#MRT HD          IV E#VM FV   W A     LI   EK N F GKL *   R HR
Conservation:  2122433037413102142121131223011212121100435466767567857444554376445436645666767888896858684744045488
STMI:                                                                MMMMMMMMMMMMMMMMMMMMM                         
SS_PSIPRED:               EEE       EEE                     HHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                    
SS_SPIDER3:                E                                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                        E
SS_PSSPRED:                                                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                DDDDD DDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D                                  DDDDDDDDDDDDDDDD
SITE:                                                   AS                                                         
MODRES_P:                                                                                          S               
CARBOHYD:           S         S                                                                                    

                       10
AA:            KPTKQEEFYA 310
gnomAD_SAV:       E  #L #
Conservation:  5924878945
SS_PSIPRED:              
SS_SPIDER3:            E 
SS_PSSPRED:              
DO_DISOPRED3:  DDDDDDD  D
DO_SPOTD:      DDDDDDD  D
DO_IUPRED2A:   D        D