P18858  DNLI1_HUMAN

Gene name: LIG1   Description: DNA ligase 1

Length: 919    GTS: 2.483e-06   GTS percentile: 0.802     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 17      gnomAD_SAV: 527      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MQRSIMSFFHPKKEGKAKKPEKEASNSSRETEPPPKAALKEWNGVVSESDSPVKRPGRKAARVLGSEGEEEDEALSPAKGQKPALDCSQVSPPRPATSPE 100
BenignSAV:                            V                      F    L         W         G                            
gnomAD_SAV:    V## VT  VLTR QD S   #  VY     M  T  T       M FKIG LMNT   RSTW    K   DEAV RH # L  S E LE  L CLSI H 
Conservation:  9553629973721212233242101111111121242434223133111434432113312324245375452102201011124310102110322121
SS_PSIPRED:        HHHH                                HH                           HHH                            
SS_SPIDER3:        HHHH                           HHHHHHH                  EEE     H                               
SS_PSSPRED:        HHH                               HHHH                                                          
DO_DISOPRED3:  DD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                    S S S              S         S                        

                       10        20        30        40        50        60        70        80        90     
AA:            NNASLSDTSPMDSSPSGIPKRRTARKQLPKRTIQEVLEEQSEDEDREAKRKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKAETPTESV 200
gnomAD_SAV:     SG#FF  CST #FS   R CCS #   LR# V  IR Q T NQE *T K E G     L       K  RD K   RY  IK   HR# F##D SM GI
Conservation:  0212122245001412233563655533454301101122101110112321010112120120011201003020122111112100111222220210
SS_PSIPRED:                                    HHHHHHHH HHH HHHHHHHHHHH         HHHHHHHH                           
SS_SPIDER3:                                    HHHHHHHHHHHHHHHHHHHHHHH          HHH HHH                            
SS_PSSPRED:                                    HHHHHHHH     HHHHH               HHHHHHHH                           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                              S                                                     T   S 

                       10        20        30        40        50        60        70        80        90     
AA:            SEPEVATKQELQEEEEQTKPPRRAPKTLSSFFTPRKPAVKKEVKEEEPGAPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIE 300
BenignSAV:                                                     E                 S                                 
gnomAD_SAV:    L    VM  D    K #  A C VL M   CYSA#RS  R   T  KSESS     V RLP     S G #ICYAM GTY  L PT   PSASQM    #
Conservation:  1111100111112122001322223124646826263222132121011111111211211232165844227663246670134348686668576368
SS_PSIPRED:           HHHHHHHHH                                                     HH                 HHHHHHHHHHHH
SS_SPIDER3:              HHHHHH                                                                        HHHHHHHHHHHH
SS_PSSPRED:                                                                                            HHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                             
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                     
MODRES_P:      S     T                     SS  T                                                                   
MODRES_A:                               K                                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            EVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLT 400
BenignSAV:                                                     M                   I                               
gnomAD_SAV:    K   W Q   M N F # M V L R   L P   FSR   T  D   VM A   F G     V#    IW  V K D MR   DSNC I   VRL HL I
Conservation:  4475995566596977998438761685346584862566533946466643584685887688774275444453964869564784454463386282
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHH               HHHHHHHHHHHH   HHHHHHHHHHH  HHHHHHHH              
SS_SPIDER3:      H HHHHHHHHHHHHHHHHHH H  HHHHHHHHH          EE   HHHHHHHHHHHH   HHHHHHHHHH   HHHHHHHH             E
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHH              HHHHHHHHHHHH   HHHHHHHHHHH  HHHHHHHHH             
DO_DISOPRED3:                                                                                          DDDDDDDD    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                        D         DD     DD D DDD      
SITE:              R                                                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            ASGVFSKFRDIARLTGSASTAKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAMVDAGKGKTAEARKTWLEEQG 500
BenignSAV:             H              T                                                       V                    
gnomAD_SAV:      R #   H  TS    S     VHST    A  H P  W LT   NRW   R   R           PM LD DSS  V      RI V  NM  V   
Conservation:  4046416735661648456335845656588986555666543956386595665449493563484486663331651437765344352453555333
SS_PSIPRED:    HHHHHHHHHHHHHHH   HHHHHHHHHHHHHHH  HHHHHHHHHHHH       HHHHHHHHHHHHH          HHHH       HHHHHHHHHHHH
SS_SPIDER3:    HHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHH  HHHHHHHHHHH     HHHHHHHHHHHHHHHH                     HHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                    HHHHHHHHHHHH
DO_DISOPRED3:                                                                             DDDDDDDDDDDDDD           
DO_SPOTD:                                                                                    DDDDDDDDD             
DO_IUPRED2A:                                                                            DDDDDDDDDDD  D             
REGION:                                                        RLRLGLAEQS                                          

                       10        20        30        40        50        60        70        80        90     
AA:            MILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLKPMLAHPTRGISEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPD 600
BenignSAV:                                                                      K                                  
gnomAD_SAV:            KL NP Q   L    S AH SDY   N   S   T G   QD I  V CI A   IY   H RR     G   R #  Y   R   S   L 
Conservation:  4356557566966326695654495518814937597679799996956473767759795499779999979697835549353467955946524584
SS_PSIPRED:    HHHHHHHHH   HHHHHHHHHHH HHHHHHH              EE   HHHHHHHHHH  EEEEEEE    EEEEE    EEEEEE          HH
SS_SPIDER3:    HHHHHHHH    HHHHHHHHHHH  HHHHHH           H   EE  HHHHHHHH   EEEEEEEE  EE EEEE    EEEEE             
SS_PSSPRED:    HHHHHHHHH   H HHHHHHHHH HHHHHHH                   HHHHHHHHHHH EEEEEE       EE     EEEEE            H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                            D          
BINDING:                                                                        E      R               R           
SITE:                                                                                                   N          
ACT_SITE:                                                                         K                                

                       10        20        30        40        50        60        70        80        90     
AA:            IISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLD 700
BenignSAV:                  I                                                              L                       
gnomAD_SAV:     NIC RR  F L I V VH  TM # W QRH     M AI# C   NV A H      T   V  S     C LVYLH#H  W KSL   DK   T   N
Conservation:  5425445462238187779596996833465666996959989855433565856955686576657478453563267245422825148553652353
SS_PSIPRED:    HHHH HHH      EEEEEEEEEEEE         HHH         HHH EEEEEEEEEEEEE          HHHHHHHHHH       EEEE  EEE
SS_SPIDER3:    HHH HHHH      EEEEEEEEEEEE    EEE  EEEE EEE E   H EEEEEEEEEE EEE   HEH    HHHHHHHHHHH      EEEE  EEE
SS_PSSPRED:    HHHHHHHHH     EEEEEEEEEE          HHHHH           EEEEEEEEEEEEHHH         HHHHHHHHHHH      EEEEEEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
METAL:                             E                                                                               
REGION:                                                 KRK                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            TKDIEQIAEFLEQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDEDSEELQAICKLGTGF 800
BenignSAV:                                                         M                 W                             
gnomAD_SAV:     R FK VTQ R    EEF KV IL   VI      #R * S     R  VH M          T   LE#Q SQ R#    ACNK R     K       
Conservation:  2142535446852564358869556765248886686898688655865725355745634653537484437136348753431515343347446456
SS_PSIPRED:       HHHHHHHHHHHHH    EEEEEE              HHHH  HHHHH      EEEEEEEE          EEEEEEEE      EEEEEEE    
SS_SPIDER3:       HHHHHHHHHHHHH    EEEEEE             HHHHHH HHHH        EEEEEEEEE  E     EEEEEEEEE    EEEEEEEE    
SS_PSSPRED:       HHHHHHHHHHHHHH   EEEEEE        HHHH HHHHHHHHHHH     EEEEEEE            HHHHHEEEE     HHHHHHHH    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                               K            R     K                                                        
METAL:                            E                                                                                
SITE:                                                                               K                        K     
MODRES_P:                                                                                                       T  

                       10        20        30        40        50        60        70        80        90     
AA:            SDEELEEHHQSLKALVLPSPRPYVRIDGAVIPDHWLDPSAVWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 900
gnomAD_SAV:      KD  D   I RV L    C  M    T   H     RVL   N # IFVF M  TSWC AEG      C AQ  P H NRRLK  AA    VWSFQ  
Conservation:  3451843431056234633584858353332754865411588768478657955375265452457687778834448268356346321446034124
SS_PSIPRED:     HHHHHHHHHHHHHH        EEE       EEE  EEEEEEE                     EEEEE  EEEEEE    HHH   HHHHHHHHHHH
SS_SPIDER3:     HHHHHHHHHH HHHE      EEEE       EEE   EEEEEEEEHE      HHH        EEE E   EEEEE    HHH   HHHHHHHHHH 
SS_PSSPRED:     HHHHHHHHHHHHHH       EEEE       EE    EEEEEEE                     EEEE   EEEE     HHH   HHHHHHHHHHH
DO_DISOPRED3:                                                                                                     D
DO_SPOTD:                                                                                                          
DO_IUPRED2A:              D                                                                     DDD    DDDD        
MODRES_P:      S                 S                                                                                 

                       10        2
AA:            SQIQNQQGEDSGSDPEDTY 919
gnomAD_SAV:    R*   * DK   CG K  C
Conservation:  2334331111132203222
SS_PSIPRED:    HHHHH              
SS_SPIDER3:    HHHHHH             
SS_PSSPRED:    HHHHH              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDD
DO_SPOTD:         DDDDDDDDDDDDDDDD
DO_IUPRED2A:    D DDDDDDDDDDDDDDDD
MODRES_P:                S S