P18887  XRCC1_HUMAN

Gene name: XRCC1   Description: DNA repair protein XRCC1

Length: 633    GTS: 2.129e-06   GTS percentile: 0.698     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 1      BenignSAV: 22      gnomAD_SAV: 356      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESR 100
BenignSAV:           L  M                                                         M   A                            
gnomAD_SAV:    VS#MC LRILF           S # VV#*   WV E     TT      E  * P  NV  N    M   LCG GE T   ACK         #LFKGS
Conservation:  4453143234443422146243454323333233222264323633336563435533647648558355864395362246676968557467895896
SS_PSIPRED:        EEEEEEEEE       HHHH                 EEEEEEE    EEEEEEEE    EEEEEEEEE           EEEEEE EE  HHHHH
SS_SPIDER3:       E EEEEEEEE      HHHHH        HEE      EEEEEEEE  EEEEEEEEEE    EEEEEEEE           EEEEEE EE  HHHH 
SS_PSSPRED:       EEEEEEEEEE      HHHHHH                EEEEEEEE       EEEE    EEEEEEEEE           EEEEEEEE   HHH  
DO_DISOPRED3:  D                                                                                          D DDDDDD 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                   DDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SGSNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEAPSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSP 200
BenignSAV:           H                                                 K   L                                W      
gnomAD_SAV:         SLIHV   # P P  SD LR QIRVI   LHNR  R #    W    #   K   S  Q   N    LC    ## TS   LRVV  RQ      
Conservation:  4455258694966249574253339956755657974542358558545264823342314335113433848234462212245377475447222123
SS_PSIPRED:           EEEE HHHHHHHHHH    EEEEEE           EEEEEE                                        HH         
SS_SPIDER3:           EEE  HHHHHHHHH     EEEEEE            EEEEE                           HHH                     
SS_PSSPRED:           EEE   HHHHHHHHHHH  EEEEEE            EEEEE                                                   
DO_DISOPRED3:                                                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDD                                DDD D DDDDDDDDDDDDDDDDDDDDDDDDDDDDD  D DDDDD DD DDDDDD
MODRES_P:                                             S                                                         TS 

                       10        20        30        40        50        60        70        80        90     
AA:            VTASDPAGPSYAAATLQASSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRTPATAPVPARAQGAVTGKPR 300
BenignSAV:                                                                             L      H   I             N Q
gnomAD_SAV:       RNL    C  VP       ALV  I   VS   NLR    R    E   K  NI G    P L  L RKLQW PSSP  VI A LP# PR# P NT*
Conservation:  1231123334553647323022431231231113222233321278524522411113413211121221123202021214102212121201022133
SS_PSIPRED:              HHHHHHHHHHH                              HHH                                  HHH         
SS_SPIDER3:              HHHHHHHH                               HHHH                                    H          
SS_PSSPRED:             HHHHHHHHHHH                                                                    HHHH        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:       T S                     S              S               T S      S              T                   

                       10        20        30        40        50        60        70        80        90     
AA:            GEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRR 400
BenignSAV:        A    S                                                                                         Q 
gnomAD_SAV:     KDAKS *S#P   V VNNH          *  LH # *  TV P P  W  G Q IMY# YT V    C *     S#VMC  # VN LHRCWW T   
Conservation:  1422215110111132233746365757968583533475365347655353432566765966445964256443792762656435744153344334
SS_PSIPRED:                HHHHHHH   EEEEE       HHHHHHHHHH   EE         EEEE     HHHHHHHH   EEEEHHHHHHHHHH     HHH
SS_SPIDER3:                  H   H   EEEEE     H HHHHHHHHHH   EE         EEEE     HHHHHHHH    EE HHHHHHHHH      H  
SS_PSSPRED:                          EEEEE       HHHHHHHHHHH             EEEE     HHHHHHHH   EEE HHHHHHHHHH        
DO_DISOPRED3:  DD DDDDDDD                                                                                          
DO_SPOTD:      DDDDDDDDDDDDDD                                                                                      
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDD                 DD  DDD DDDDDDD      DDDD                                  DDDDD
MODRES_P:                                                                            S                             

                       10        20        30        40        50        60        70        80        90     
AA:            YLMAGPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKE 500
PathogenicSAV:                               N                                                                     
BenignSAV:                                                                                         Y               
gnomAD_SAV:     PL E #       S   SSRR    RIL N  R  N#       RL * # PLG S VP     K # TDR    E  S VGNY     KPS  V   K
Conservation:  8852312656734123313223211211323120220322112231111001112221231111233012313121212163332345565538321122
SS_PSIPRED:              HHHH                                       HHHH                               HHHHHHHHHHHH
SS_SPIDER3:                                                          HH                                HHHHHHHHHHHH
SS_PSSPRED:                                                         HHHH                                HHHHHHHHHHH
DO_DISOPRED3:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:             SSS          S                        SS     T   T   S                       S  T            

                       10        20        30        40        50        60        70        80        90     
AA:            HRLPPGQEENGEDPYAGSTDENTDSEEHQEPPDLPVPELPDFFQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDNMSDRVQFVITAQEWDPSFEEALMD 600
BenignSAV:                  L                                            QW               #                        
gnomAD_SAV:      P  A  A    L  AFM   MNG    KL   L  D  H     Y Y #R YS E#WW   Q I       K  LNGWAL  M  E    R  DV   
Conservation:  3411210113216455667677661821132522867379556064196766354115482518555993935555945494666855585319776613
SS_PSIPRED:    H                                             EEEEE    HHHHHHHHHHHHH   EEEE      EEEEE     HHHHHHHHH
SS_SPIDER3:                                                  EEEEE    HHHHHHHHHHHHH   EEEE     EEEEEEE    HHHHHHHHH
SS_PSSPRED:    H                                             EEEEE    HHHHHHHHHHHHHH  EEEE      EEEEE      HHHHHHH 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                   
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                            
MODRES_P:                       ST   T                                                                             

                       10        20        30   
AA:            NPSLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA 633
gnomAD_SAV:     TF S L# #        #  F   #   ML V
Conservation:  423526445153213234363363644254522
SS_PSIPRED:        EE  HHHHHHHHHH     HHH       
SS_SPIDER3:        EEE HHHHHHHHH   E  HHHH      
SS_PSSPRED:         EE HHHHHHHHHH     HHH       
DO_DISOPRED3:                                   
DO_SPOTD:                                       
DO_IUPRED2A: