P19022  CADH2_HUMAN

Gene name: CDH2   Description: Cadherin-2

Length: 906    GTS: 1.862e-06   GTS percentile: 0.604     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 10      BenignSAV: 6      gnomAD_SAV: 379      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MCRIAGALRTLLPLLAALLQASVEASGEIALCKTGFPEDVYSAVLSKDVHEGQPLLNVKFSNCNGKRKVQYESSEPADFKVDEDGMVYAVRSFPLSSEHA 100
BenignSAV:                         T                                                                               
gnomAD_SAV:      W    PWI   P      V LQ  S NT  E   L G    F L   Y             H EI I     K T#   EGG T   L R L F  R 
Conservation:  2222222222200000020010022222222200221000101011101022222224161271122250413222215151036133412020011112
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSS                                                                           
SS_PSIPRED:        HHHHHHHHHHHHHHHHHHHHHH             EEEEEE        EEEEEEEE       EEEEE      EE     EEE EE       E
SS_SPIDER3:         HHHHHHHHHHHHHHHHHHHH              EEEEEE        EEEEEEEE      EEEEEE     EEE     EEE EEEEE    E
SS_PSSPRED:          HHHHHHHHHHHHHHHHHHH              EEEEEE         EEEEEEE       EEEEE      EEE   EEEEEEEEE     E
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_IUPRED2A:                                                                            DD                         
PROPEP:                                 SGEIALCKTGFPEDVYSAVLSKDVHEGQPLLNVKFSNCNGKRKVQYESSEPADFKVDEDGMVYAVRSFPLSSEHA
MODRES_P:                                                                                                     S    

                       10        20        30        40        50        60        70        80        90     
AA:            KFLIYAQDKETQEKWQVAVKLSLKPTLTEESVKESAEVEEIVFPRQFSKHSGHLQRQKRDWVIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGP 200
PathogenicSAV:                                                              D                                      
BenignSAV:                      T                                                                             T    
gnomAD_SAV:       T TEYRQNR     T  F  T IF#  P  V  K       G SN  G                 L  F  S             E I  Q      
Conservation:  2314061201111120314130120001101201000020112411000101032826868686665656748536621552647848221148895786
SS_PSIPRED:    EEEEEEE     EEEEEEEEEEE     HH         EEE            EEEEE                   EEEEEEE      EEEEEEE  
SS_SPIDER3:    EEEEEEEE    EEEEEEEEEEE                 E             EEEE       EE           EEEEEEE     EEEEEEEEE 
SS_PSSPRED:    EEEEEEE      EEEEEEEEEE                                                     HHHHHHH        EEEEEEE  
DO_DISOPRED3:                            DDDDDDDDDDDDDD  DD                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                   D  DD    D  DDDDDD           DDDDDD 
PROPEP:        KFLIYAQDKETQEKWQVAVKLSLKPTLTEESVKESAEVEEIVFPRQFSKHSGHLQRQKR                                         
METAL:                                                                              E                              
MODRES_P:                                        S                                                                 
CARBOHYD:                                                                                               N          

                       10        20        30        40        50        60        70        80        90     
AA:            GADQPPTGIFIINPISGQLSVTKPLDREQIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGTVPEGSKPGTYVMTVTAIDADDPNAL 300
PathogenicSAV:                             P                                                                       
BenignSAV:                L                                                                                        
gnomAD_SAV:     VE # S     SA L   L   T  H E SQ R           H    V V                  GS      L     #  I    T N DTP
Conservation:  7865482355263542826364475787334256865666846654463755428474535795675122436765353456873573456162662332
SS_PSIPRED:             EEEE    EEEE          EEEEEEEEE          EEEEEEEE            EEEEEE        EEEEEEEE        
SS_SPIDER3:             EEE     EEEE          EEEEEEEEE     E    EEEEEEEEE       E E  EEEEE        EEEEEEEE        
SS_PSSPRED:             EEE      EEE     HHH  EEEEEEEEE           EEEEEEEE            EEEE         EEEEEEEEE       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:          D                                                            DDDDDDD       D  DDDD           
METAL:                                  D E                              DMNDN                             D D     
CARBOHYD:                                                                              N                           

                       10        20        30        40        50        60        70        80        90     
AA:            NGMLRYRIVSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENRVDIIV 400
PathogenicSAV:                                                     N                                               
gnomAD_SAV:    SE   C FM       LR V AT S   #VVAM   P Q  AK FM T   A    D   S     M IF     S ST      M  A        ST 
Conservation:  6735474843718136424785874378363758697785653683576775766953348886867756364958884736321262656255233356
SS_PSIPRED:     EEEEEEE            EEEE    EEEEE          EEEEEEEEE              EEEEEEEE      EE   EEEEEEE     EEE
SS_SPIDER3:     EEEEEEEE          EEEEE    EEEEE     H    EEEEEEEEEE            EEEEEEEE EE     E   EEEEEEE      EE
SS_PSSPRED:      EEEEEEE           EEEE     EEEE          EEEEEEEEE             EEEEEEEEE           EEEEEE      EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                   DDDDDDD          D             DD         DD          D DD        DDDDD             
METAL:         N                                                   D                                               
CARBOHYD:                              N                                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            ANLTVTDKDQPHTPAWNAVYRISGGDPTGRFAIQTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNENPYFAPN 500
PathogenicSAV:       N                                                                                             
BenignSAV:                                                          A                                              
gnomAD_SAV:       IM    *    G  TE S   R   EL     NL G E   NM   VN   S V  FI T      S EE  RL *    AT I   #  KA   AS
Conservation:  4746526564515338242554337831448261755135463444344476613315363726173226324431333666476637184994919125
SS_PSIPRED:    EEEEEE         EEEEEEEE       EEEE       EEEEE          EEEEEEEEEE              EEEEEEEEE           
SS_SPIDER3:    EEEEE          H EEEEEE       EEEE      EEEEEEE         EEEEEEEEEE              EEEEEEEE E          
SS_PSSPRED:    EEEEE           EEEEEEE       EEEEE      EEEEEEE        EEEEEEEEEEE             EEEEEEEEEE          
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:    DDD         DDDDDDD        DDDDDDDD       DDD                       DDDDDDDD     DDDD            DD
CARBOHYD:       N                                                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            PKIIRQEEGLHAGTMLTTFTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLLDIND 600
PathogenicSAV:                                                                                                 #   
gnomAD_SAV:     N VH   R  #SIV  ALA     Q L R    S VC  #S  NV  M           L*  I# T #   A     D  L I  #A#   C      
Conservation:  4515634762223316326281788443351346443287527715411383536242676661343352634353526371323577995752939699
SS_PSIPRED:     EEEEEE       EEEEEEEE    HH     EE    HHH EEE     EEEE              EEEEEEEEEE      EEEEEEEEEEE    
SS_SPIDER3:     EEEEEE       EEEEEEEE          EEEE      EEEEE    EEEE              EEEEEEEEEE      EEEEEEEEEEEE E 
SS_PSSPRED:     EEEEEE       EEEEEEEE                     EEE     EEEEE             EEEEEEEEEE       EEEEEEEEEEEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDD   D     DDDD   D D      DDD                        DD                                          
CARBOHYD:                                                                             N                            

                       10        20        30        40        50        60        70        80        90     
AA:            NAPQVLPQEAETCETPDPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWTITRLNGDFAQLNLKIKFLEAGIYEVPIIITDSGNPPKSNISILRVKV 700
PathogenicSAV: T           W             G                                                                S        
gnomAD_SAV:    SG         N K T    VSV    C      R    H SV   NL      SQ   N  *     N FA D F FA     L S   T   T HM #
Conservation:  8391529284549542112248698291921553696386830081256488842645753665284313832659268627477944443436263686
SS_PSIPRED:              EEE       EEEEEE          EEEE           EEEEEE   EEEEEEE      EEEEEEEEEEE        EEEEEEEE
SS_SPIDER3:        E     EEE       EEEEEEE         EEEEE           EEEEEE  EEEEEEEEE     EEEEEEEEEE        EEEEEEEE
SS_PSSPRED:                       EEEEEEE          EEEEE          EEEEEE   EEEEEE         EEEEEEEEE          EEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:        DDDDDDDDDDDD                                                                                   
CARBOHYD:                                                        N                                        N        

                       10        20        30        40        50        60        70        80        90     
AA:            CQCDSNGDCTDVDRIVGAGLGTGAIIAILLCIIILLILVLMFVVWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDTVEPDA 800
gnomAD_SAV:       N #R   EMH   AV P IST   V   SL     # ISA    CQGR C TNR    S     Y           G        P     P     
Conservation:  9397048583224233547778575336847454693567466394748659865877898777769867767677899666955464455573345432
STMI:                                  MMMMMMMMMMMMMMMMMMMMM                                                       
SS_PSIPRED:    E          HHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHEEEE                           
SS_SPIDER3:    EE       E H         HHHHHHHHH     HHHHHHHHHH     HHHH H      HHHHHH  E                             
SS_PSSPRED:    E                    HHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHH        HHHHH   EE                            
DO_DISOPRED3:                                                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                      DDDDDDDD                   DDDDDDDDDD       DDDDDDDD
DO_IUPRED2A:                                                          DDDD          DDDDDDDDDD DDDDDDDDDDDDDDDD DDD

                       10        20        30        40        50        60        70        80        90     
AA:            IKPVGIRRMDERPIHAEPQYPVRSAAPHPGDIGDFINEGLKAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSLNSSSSGGEQDYDYLNDWGPRFKKLADM 900
BenignSAV:                                                 S                                                       
gnomAD_SAV:    M      QTY   V TK H LAQ #   S HME   I    VS Y                  D #P     VK  G  A  NC    G RS#      V
Conservation:  2322658835686222433563642256545544673564445538653543645865545734623553633233321334352542455732334243
SS_PSIPRED:                                 HHHHHHHHHHHHHHH         EEE                                   HHHHHHHHH
SS_SPIDER3:                                  HHHHHHHHHHHHH          EEEEE E                          HHHH HHHHHHHHH
SS_PSSPRED:                                   HHHHHHHHHHHH          EEE                                   HHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD                                    DDDDDDDDDDDDDDDDDDDDDDDDDBDDDDDDDDDD    
DO_SPOTD:      DDDDD DDDDD                                                    DDDDDDDDDDDDDDDDDDD                  
DO_IUPRED2A:   DDDD  DDD DDD DDDDDDDDDDDDDDD D DDDDDDDDDDDDDDDDD DDDDDDDDD       DDDDDDDDDDDDDDDDDDDD              

                     
AA:            YGGGDD 906
gnomAD_SAV:        N 
Conservation:  324242
SS_PSIPRED:    H     
SS_SPIDER3:    H     
SS_PSSPRED:    H     
DO_DISOPRED3:     DDB
DO_SPOTD:        DDDD
DO_IUPRED2A:   D   DD