P19438  TNR1A_HUMAN

Gene name: TNFRSF1A   Description: Tumor necrosis factor receptor superfamily member 1A

Length: 455    GTS: 5.446e-07   GTS percentile: 0.056     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 24      BenignSAV: 5      gnomAD_SAV: 172      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGLSTVPDLLLPLVLLELLVGIYPSGVIGLVPHLGDREKRDSVCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRHCL 100
PathogenicSAV:                                         E         Q       #  #                M #  #              # 
gnomAD_SAV:       F MT       V     A    AD   G   R     E        V     L  S             S L         D S  I    Y  N  
Conservation:  0000000000000111221100010001100100100011010710111000010004300622623201090001002070171032723005000180
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:             HHHHHHHHHHHHH HH                                        EEEEE          EEE                 
SS_SPIDER3:           HHHHHHHHHHHHHH                           EE       E       EEEEEE        EEEE     E          E
SS_PSSPRED:           HHHHHHHHHHHHHHH                                           EEEE                               
DO_DISOPRED3:  DDDDDDDDDDDDBBBBBDDDDDDDDDDDDDDDBBDD DDDDDD                                                         
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDD     DDDDDDDDDD                                                             
DO_IUPRED2A:                                                                                                       
DISULFID:                                                 C             CC  C         C        C  C              C 
CARBOHYD:                                                           N                                              

                       10        20        30        40        50        60        70        80        90     
AA:            SCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHLSCQEKQNTVCTCHAGFFLRENECVSCSNCKKSLECTKLCLPQIE 200
PathogenicSAV:  #   Q        G #   #                                 Y                                           N 
gnomAD_SAV:               M  F   G Q IM      E Q H GG      SY    SA M      R       #  L     V    T    N   M   V  T 
Conservation:  2700811100212212710025317260131400000010108104106011000001110031130610212001002015012001012000200100
SS_PSIPRED:          HHH  EEEE               EEEE       EE         EEEE EE     EEE    EEE   EEEE         HHH    EEE
SS_SPIDER3:       E       EEEE       EE  E   EEEEE      EEEE       EEEEE        E     EEEE   EEE          H     EEE
SS_PSSPRED:               EEEE               EEE                   EEEEE                                         EE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                            DDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       
DISULFID:       C  C           C       C C               C  C  C        C       C C          C  C  C     C   C     
CARBOHYD:                                                  N     N                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            NVKGTEDSGTTVLLPLVIFFGLCLLSLLFIGLMYRYQRWKSKLYSIVCGKSTPEKEGELEGTTTKPLAPNPSFSPTPGFTPTLGFSPVPSSTFTSSSTYT 300
BenignSAV:                                 L                                                                       
gnomAD_SAV:         DN       T      F   C  LVV L H RQ  F           TAE A #  A   AV  KAGLGS    #R   LIA#LR  L  T A  
Conservation:  1000010111022112222322211222000011100000000100000001001110011000000011111121010001200011000000000000
STMI:                     MMMMMMMMMMMMMMMMMMMMM                                                                    
SS_PSIPRED:                HHHHHHHHHHHHHHHHHHHHHHHHHHHH                                                            
SS_SPIDER3:     E           HHHHHHHHHHHHHHHHHHHH    H        E                                                     
SS_PSSPRED:                EHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                                                          
DO_DISOPRED3:                                                  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                          DDDDDDDDDDDDDDDDDDD    D                D    

                       10        20        30        40        50        60        70        80        90     
AA:            PGDCPNFAAPRREVAPPYQGADPILATALASDPIPNPLQKWEDSAHKPQSLDTDDPATLYAVVENVPPLRWKEFVRRLGLSDHEIDRLELQNGRCLREAQ 400
BenignSAV:         T              E                   E                                                            
gnomAD_SAV:    SS SR    ##K  T A# R  S# S  FV   VHK F R D   Q      P  # A     V   A            NHN  E R P   HR  K  
Conservation:  0000000000001100000100100000000000000010011011011000000212352443043214344534162515024332314120022322
SS_PSIPRED:                           HHHH            HHHH            HHHHHHHHHH  HHHHHHHHHH    HHHHHHHHHH    HHHHH
SS_SPIDER3:                EE         HHHH                            HHHHHHHHHH  HHHHHHHHHH    HHHHHHHHHH    HHHHH
SS_PSSPRED:                                            HHH            HHHHHHHHHH    HHHHHHHHH   HHHHHHHHHH    HHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                              
DO_IUPRED2A:      D DD  DDDD            DD DD     DDDDDDDDDDDDDDDDDDDDDDDD                                         
REGION:                                             LQKWEDSAHKP                                                    

                       10        20        30        40        50     
AA:            YSMLATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALCGPAALPPAPSLLR 455
gnomAD_SAV:     G  G  KL  L# KGA G  RH  H        GG K   YR    L   GP  
Conservation:  5234213011000102041040014003150233204201210000000000000
SS_PSIPRED:    HHHHHHHHHH       HHHHHHHHHH     HHHHHHHHH              
SS_SPIDER3:    HHHHHHHH         HHHHHHHHHH     HHHHHHHH               
SS_PSSPRED:    HHHHHHHHHH   HHH HHHHHHHHHH     HHHHHHHHHH             
DO_DISOPRED3:                                                 DDDDDDDD
DO_SPOTD:                                                 DDDDDDDDDDDD
DO_IUPRED2A: