P20849  CO9A1_HUMAN

Gene name: COL9A1   Description: Collagen alpha-1(IX) chain

Length: 921    GTS: 1.9e-06   GTS percentile: 0.618     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 11      gnomAD_SAV: 520      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MKTCWKIPVFFFVCSFLEPWASAAVKRRPRFPVNSNSNGGNELCPKIRIGQDDLPGFDLISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTR 100
gnomAD_SAV:     NIY*    L SM G   LR TVVL CHTG     S  V H F T FM SHHG #   M  H  A  T   K   K#EA    # TF  RS    #    
Conservation:  1111110111111111111110101011010211010100112981321534257566464873532331341423204131233762442123345253
STMI:          SSSSSSSSSSSSSSSSSSSSSSS                                                                             
SS_PSIPRED:         HHHHHHHHHHHHHHHHHHH                                  HHHHH   HHH               EEEE       EE HH
SS_SPIDER3:         HHHHHHHHH   HH EEEEEEE                               HHHHH  HHH     EE        EEEEEE      EEEHH
SS_PSSPRED:          HHHHHHHHHHHHHHHHEEEE                                        HHHHHH HH         EEEEE      EE   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                  
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDD D         DD                                                                
DO_IUPRED2A:                                  D   D                                                                
DISULFID:                                                 C                                                        

                       10        20        30        40        50        60        70        80        90     
AA:            NLYPSGLPEEYSFLTTFRMTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQWHKIMIGVERSSATLFVDCNR 200
BenignSAV:                                                          L                                              
gnomAD_SAV:     S#  E LAV    MM QVSRN P ##R  G TR   R* #  MRSK * L  L  N  Q ERFR  T LSS       RR TI  L#SR  I SI    
Conservation:  0365187836745235677131421318348643612703846534772045425222214201002021031045633895535162111459447912
SS_PSIPRED:    HH         EEEEEEE         EEEEEEE     EEEEEEE     EEEEEE      EEEEEE           EEEEEEEE  EEEEEE  EE
SS_SPIDER3:    HH        EEEEEEEE         EEEEEEE     EEEEEEE   EEEEEEEEE     E E             EEEEEEEEE   EEEEE EEE
SS_PSSPRED:              EEEEEEEE         EEEEEEE      EEEEEE    EEEEEEEE       EEEE           EEEEEEEE  EEEEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                            D                                                          
DISULFID:                                                                                                       C  
CARBOHYD:                                                                            N                             

                       10        20        30        40        50        60        70        80        90     
AA:            IESLPIKPRGPIDIDGFAVLGKLADNPQVSVPFELQWMLIHCDPLRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP 300
gnomAD_SAV:    F*Y*LV  K QT V #  M  ER V LHI L LK * T  YY T Q G   #N V D   S      KVHADK ALL   AHL    TNAV#SE  REAL
Conservation:  4333142253162339241586713450277311211132223313515434045111111111111210232334143141152282354184671140
SS_PSIPRED:       EE           EEE                   EEE                                                           
SS_SPIDER3:       EE            EEE EE           H E                                                               
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:                                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:            DDDDDDDDDDD       DDDDDDDD             DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                   DD                           D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
METAL:                     D D                                     H                                               
DISULFID:                                               C         C                                                

                       10        20        30        40        50        60        70        80        90     
AA:            PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSIGSKGQKGEPGVPGSRGFPGRGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGPPGPPGPPGPRG 400
BenignSAV:      S                                    P                                                             
gnomAD_SAV:    LS#TRTVD           D   G   I S RY#  TAPER    SR R WH    HS S RHV A  S    *R H  SI# S    QSSLSCLT S  
Conservation:  1812610840821821813915611921710821811710825642802821811804029218128129328418328319109139218238219417
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            TIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGEPGPQGLPGA 500
BenignSAV:                                                      G                                                  
gnomAD_SAV:    A     EA  # S  ##SC *   I  L  LQ VE  V  Q *   T  G    DFR A TE TL     *ST DVA G # R  WA H    L    D 
Conservation:  1121014113531463341271494253464481183181482362463282370091181273161191381272081573281370191285581192
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:             DGDPLCPNACPP                                                                                   
DISULFID:                C   C                                                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            PGDQGQRGPPGEAGPKGDRGAEGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGSTGAPGKPGQM 600
BenignSAV:                                                                                  F                      
gnomAD_SAV:     CY   Q    K# S  VTRVKDV        L   M F #   SNE L  L  # Q EE  L  G    V L AR F S NDA    S A G  NA   
Conservation:  2921913901940921820910912900921916940712602614725512616911813812942904935935902912701713911811901802
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GNSGKPGQQGPPGEVGPRGPQGLPGSRGELGPVGSPGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGEAGERGELGDIGLPG 700
BenignSAV:                         R                                                              K                
gnomAD_SAV:    VHA# L        M# # #R  S N  *    R RC    Q    R#AHH  L #          VL SQLS      D         TRDF G     
Conservation:  9228607219108209119328039116208407316126015107116207226115216035236006108359116028026016026405206117
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGRAPTDQHIKQVCMRVIQEHFAEMAASLKRPDSGATGLPGRPGPPGP 800
BenignSAV:                                                                       V                                 
gnomAD_SAV:        V K   A VK SA  QE S #  S   R  WR     #V S RV R  L   L#V    R  V  T#      VS   H        S K  SL S
Conservation:  1661080391191292390483390381091173274483271181470671362221502321451432122210211121331142151461263563
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD    BBBB      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:                                                                PTDQHIKQVCMRVIQEHFAEMAASLKRPDS              

                       10        20        30        40        50        60        70        80        90     
AA:            PGPPGENGFPGQMGIRGLPGIKGPPGALGLRGPKGDLGEKGERGPPGRGPNGLPGAIGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGLPGF 900
BenignSAV:                            T                                             K           L                  
gnomAD_SAV:    TST  D     HI  C PL    S#D   VKE R        CV R    S  R  V   SATSS       LESDQ L  M       VSLR R F S 
Conservation:  3722711713810712734722643802804821730852823822228027038118238118114351262350361060170262151352251233
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DDDDDDDDD DDBBBBBB    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20 
AA:            CEPASCTMQAGQRAFNKGPDP 921
gnomAD_SAV:      S    IKT  #G      S
Conservation:  533324011111011041311
SS_PSIPRED:                         
SS_SPIDER3:                         
SS_PSSPRED:                         
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDD
REGION:         EPASCTMQAGQRAFNKGPDP