P23246  SFPQ_HUMAN

Gene name: SFPQ   Description: Splicing factor, proline- and glutamine-rich

Length: 707    GTS: 6.649e-07   GTS percentile: 0.091     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 188      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPP 100
gnomAD_SAV:           N  S  S             P N    L A#S S       TR# H     R      Q      ALEHSL    A Q# L  LR Q   ##R
Conservation:  2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
REGION:                RGGGGGGFHRRGGGGGRGG                                                                         
MODRES_P:             S                        S                                                                   
MODRES_M:              R                                                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            PPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQ 200
gnomAD_SAV:        N P   A       #  D           T             D                                        V        S  
Conservation:  2222222222222222222222222222222222222222222222222222222222222222222222222222222001011110222222222222
SS_PSIPRED:                                                                                                        
SS_SPIDER3:                                                                                                        
SS_PSSPRED:                                                                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            GPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLF 300
gnomAD_SAV:             A  L         A   L   A         S     Y TS        SL R   VLRD MM    V              S        
Conservation:  2222222222222222222222220000222222222202002222222222222222222222200002001120132223124333345255644234
SS_PSIPRED:                                                                                                HH   EEE
SS_SPIDER3:                                                                                                     EEE
SS_PSSPRED:                                                                                                     EEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD        
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD          
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   D DDD   
MODRES_P:                                                                              S         S         Y       
MODRES_M:                                         R     R  R                                                       
MODRES_A:             K                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            VGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERA 400
gnomAD_SAV:    F   L  T#G   R#V            S                         R         H    V    ICSV           G N   TV   
Conservation:  3533425334212225514472223353433535233344454454575377831253473536555453568374664445564454466413825564
SS_PSIPRED:    EE       HHHHHHHHHHH   EEEEEE    EEEEEEE HHHHHHHHHHH        EEEEEE     EEEE    HHH HHHHHHHHHHH    EE
SS_SPIDER3:    EE       HHHHHHHHHHH    EEEEE    EEEEEE  HHHHHHHHHH          EEEEE     EEEEE       HHHHHHHHH     EEE
SS_PSSPRED:    E        HHHHHHHHHHH    EEEE      EEEEEHHHHHHHHHHHHH        EEEEEE    EEEEE        HHHHHHHHHHH   EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                 D                                  DD                                                 
MODRES_P:                                                                         T     S    S                     
MODRES_M:                   K                                                                                      
MODRES_A:                        K                  K                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            VVIVDDRGRSTGKGIVEFASKPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQHGTFEYEYSQRWKSLDEM 500
gnomAD_SAV:      V           V   #   G                S SH    K V    E     Q      SVCE     S H S R            A    
Conservation:  3323335554345644554352374564535135443543484833486256362658567633264425322122243443444654555347557255
SS_PSIPRED:    EEEE        EEEEEE   HHHHHHHHHH    EEE      EEEEE          HHHHHHH HHHHHHH           HHHHHHHHHHHHHHH
SS_SPIDER3:    EEEE     E E EEEEE   HHHHHHHHHH    EEE      EEEEE           HHHH   HHHHHHH           HHHHHHHHHHHHHHH
SS_PSSPRED:    EEEE         EEEEE   HHHHHHHHHH   EEEE      EEEE           HHHHHHH HHHHHHH            HHHHHH HHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                 DD                              DDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDD             D DD
MODRES_P:                                                                                                     S    
MODRES_A:                          K                                                  K                            

                       10        20        30        40        50        60        70        80        90     
AA:            EKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRM 600
gnomAD_SAV:            G    EV     G       QR         V       H   F S G               #     I  CHC   KRI C  V N  QI
Conservation:  5595444844444554685826654633566435445343545654567883534644563322555586474377645424331552246623222222
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH    
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   
DO_DISOPRED3:                                                 BBBBBBBBBBBB DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                           DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_M:                                                                            R                             

                       10        20        30        40        50        60        70        80        90     
AA:            GYMDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSDMRTERFGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEG 700
gnomAD_SAV:    # V  Q    * # RR V VA HCS      TL    DSL F     ISS SL     AGE C        V H  A   G #                 
Conservation:  3615245364343242333532232222425422245424324423323222222223132321333211211222221223112124223233122652
SS_PSIPRED:        HHHH                                                                                            
SS_SPIDER3:                                                                                                        
SS_PSSPRED:         HHH                                                                                            
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD      D    DDDDDDDDDDDDDDDDDDDDDDDDDBBB
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                               S                                                            T   Y         
MODRES_M:                                                                                      R           R R     

                      
AA:            PNKKPRF 707
gnomAD_SAV:    S   #Q 
Conservation:  3132122
SS_PSIPRED:           
SS_SPIDER3:           
SS_PSSPRED:           
DO_DISOPRED3:  BBBBBBB
DO_SPOTD:      DDDDDDD
DO_IUPRED2A:   DDDDDDD