P23415  GLRA1_HUMAN

Gene name: GLRA1   Description: Glycine receptor subunit alpha-1

Length: 457    GTS: 1.753e-06   GTS percentile: 0.560     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 36      BenignSAV: 7      gnomAD_SAV: 199      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MYSFNTLRLYLWETIVFFSLAASKEAEAARSAPKPMSPSDFLDKLMGRTSGYDARIRPNFKGPPVNVSCNIFINSFGSIAETTMDYRVNIFLRQQWNDPR 100
PathogenicSAV:                                               R                     Y                       W P    #
BenignSAV:            P                                                                                            
gnomAD_SAV:    ## SKA *V I*DATASLG          H T RL  SLN   * IR   R   S         M MR      N    V            Q ES NLH
Conservation:  3333333310110020031321232223332111223444343223331544224443665667667657644666996665436576575979499799
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                        
SS_PSIPRED:     HHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHH                  EEEEEEEEEE     EE   EEEEEEEEEEEE    
SS_SPIDER3:      HHHHHHHHHHHHHHHHHHH HHHHHHH        HHHHHHHHH                  EEEEEEEEEEE        E EEEEEEEEEEE    
SS_PSSPRED:      HHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHH                 EEEEEEEEEE          EEEEEEEEEE     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                 
DO_IUPRED2A:                                D                                                                      
CARBOHYD:                                                                       N                                  

                       10        20        30        40        50        60        70        80        90     
AA:            LAYNEYPDDSLDLDPSMLDSIWKPDLFFANEKGAHFHEITTDNKLLRISRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFGYTMNDLIFEWQE 200
PathogenicSAV:                         N                                                                M          
gnomAD_SAV:       D  R  A   E Y          C #SK                 FQ   I   T     P  AR    LS# A ISN    N   R  V      D
Conservation:  9774979967999997799699999999999777597767797777775659769687866647577759686977665957967767969999675654
SS_PSIPRED:              EE  HHHHHH     EEE       EEE     EEEEE     EEEEEEEEEEEE              EEEEEEE    HHHEEEEE  
SS_SPIDER3:               E  HHHHHH EE  EEE E   EEEEEE    EEEEE     EEEEEEEEEEEEE     H     EE EEEEEEEEE   EEEEEE  
SS_PSSPRED:                  HHHHHH               EEEE    EEEEE     EEEEEEEEEEE             EE  EEEEE       EEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                       C             C                    

                       10        20        30        40        50        60        70        80        90     
AA:            QGAVQVADGLTLPQFILKEEKDLRYCTKHYNTGKFTCIEARFHLERQMGYYLIQMYIPSLLIVILSWISFWINMDAAPARVGLGITTVLTMTTQSSGSRA 300
PathogenicSAV:                                   L          #       E   SR       C    N     T H      AM I   HN  T# 
BenignSAV:                                             Q                                                           
gnomAD_SAV:     E  H  N       T  GQ                   VQ    L           T   F    *        T  VH       G     *    * 
Conservation:  1354634465587774463536643655265555676764666677466445644666976644674567766667474965776674664796766766
STMI:                                                            MMMMMMMMMMMMMMMMMMMMMM     MMMMMMMMMMMMMMMMMMMMM  
SS_PSIPRED:       EEE    EE  EEEEEEEE   EEEEE    EEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHH     HH HHHH HHHHH
SS_SPIDER3:       EEE   EE   EEEEEEEE  EEEEEEE   EEEEEEEEEEEEE  HHHHHHHHHHHHHHHHHHHHHH     HHHHHH HHHHHHHHHHH HHHHH
SS_PSSPRED:       EEE        EEEE        EEE     EEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH         EEE HHHHHHHHHHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
REGION:                                     YNTGKF                                                                 
METAL:                            E D                    H                                                         
SITE:                                                                                                  L           
DISULFID:                               C          C                                                               

                       10        20        30        40        50        60        70        80        90     
AA:            SLPKVSYVKAIDIWMAVCLLFVFSALLEYAAVNFVSRQHKELLRFRRKRRHHKSPMLNLFQEDEAGEGRFNFSAYGMGPACLQAKDGISVKGANNSNTTN 400
PathogenicSAV:    E  #M       E  P                                                                                 
BenignSAV:                                                     Q                            S                K T   
gnomAD_SAV:    P         T L      I    D    PVI    W R G PQ  T QIY #RLV  PL # G#R VH  SAD   S     VRYS LA DTKKIT  D
Conservation:  7766999999999999999799979999999999779999799765545340421222333435116333242574335352123221113212212210
STMI:                   MMMMMMMMMMMMMMMMMMMMM                                                                      
SS_PSIPRED:          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH     HH                      EEE                 
SS_SPIDER3:          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHH                        H                           
SS_PSSPRED:          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH    HH HHHHHH                                   
DO_DISOPRED3:                                             BBBDDDDDDDDDDDDDDDDDD                DDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                              DDDDDDDDD

                       10        20        30        40        50       
AA:            PPPAPSKSPEEMRKLFIQRAKKIDKISRIGFPMAFLIFNMFYWIIYKIVRREDVHNQ 457
PathogenicSAV:                        #   H                     H       
BenignSAV:      L                                                       
gnomAD_SAV:     #  LP P  QV* F  P   MMN T CV   T     SI  R # #TAC G AQ H
Conservation:  111123551554784752645456533323444356348355532455342544613
STMI:                                   MMMMMMMMMMMMMMMMMMMMM           
SS_PSIPRED:            HHHHHHHEEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  
SS_SPIDER3:            HHHH HHH   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH        
SS_PSSPRED:            HHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   
DO_DISOPRED3:  DDDDDDDDDDDD                                        BBBBB
DO_SPOTD:      DDDDDDDDDDDD                                        DDDDD
DO_IUPRED2A:   DDDDDDDDDDDD                                            D