P24386  RAE1_HUMAN

Gene name: CHM   Description: Rab proteins geranylgeranyltransferase component A 1

Length: 653    GTS: 1.103e-06   GTS percentile: 0.269     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 5      BenignSAV: 11      gnomAD_SAV: 199      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MADTLPSEFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENSDIVSDSPVWQDQILENEEAIALSRKDKTIQHVEV 100
PathogenicSAV: #                                                                                                   
BenignSAV:       G                                                                            F        C           
gnomAD_SAV:     GGA LLGLG  #          G   A   W      L   C     T       C   A   H   L   S      F        C  E        
Conservation:  5100221011111122563755374453648528775736478566976758446657535232111001100142224233843517111416636263
SS_PSIPRED:              EEEE   HHHHHHHHHH     EEEEE          EEEEHHHHHHHHHHH             HHH    HHHHHH     EEEEEEE
SS_SPIDER3:              EEEE   HHHHHHHHHH     EEEEEE        EEEEEHHHHHHHHHHH            HHHH    HHHHHH    EEEEEEEE
SS_PSSPRED:              EEEE    HHHHHHHHHHH   EEEEE         EEEE HHHHHHHHHHH                    HHHHHH      EEEEHH
DO_DISOPRED3:  DDDD                  DDDDDDDDDD           DDD                                                      
DO_SPOTD:      DDDD                                                                                                
DO_IUPRED2A:                                                                           DD                          

                       10        20        30        40        50        60        70        80        90     
AA:            FCYASQDLHEDVEEAGALQKNHALVTSANSTEAADSAFLPTEDESLSTMSCEMLTEQTPSSDPENALEVNGAEVTGEKENHCDDKTCVPSTSAEDMSENV 200
BenignSAV:        G                                                                                                
gnomAD_SAV:      HG R F    K   VV   RVF I  D           A Y     I  D        GN   # QI DTD  AG DK        T       GG  
Conservation:  4563324013131312232212011121001111101111021110000102110002100101000101101110114000110100010101001201
SS_PSIPRED:    EEE        HHHHHHHHH   EEE      HH                            HHH HH                        HHH     
SS_SPIDER3:    EEEE       HHH           E     H                              H H HH    E E                   H     
SS_PSSPRED:    HHH        HHHHHHHHHHH                           HHH                                                
DO_DISOPRED3:                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD 
DO_SPOTD:               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:               DDDDDDDDDDDDDDD    DDDDDDDDDDD      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PIAEDTTEQPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLT 300
BenignSAV:           A                                                                                             
gnomAD_SAV:     VV A AKP  E   I      GD       I  Q C Q      I T  # Q  D   F   V    ALM        H    #   T          I
Conservation:  3012001111122143423545368568686456357859467688646455484765544568343253434888786868456274556884887875
SS_PSIPRED:                    HHHHHH      EE   HHHH   HHHHHHHH    EEEEEEEE EEEEEE  EEEE    HHHHHH     HHHHHHHHHHHH
SS_SPIDER3:                    HHHH      EEEEE  EEEE   HHHHHHHH     EEEEEEEEEEEEEE  EEEE    HHHHH      HHHHHHHHHHHH
SS_PSSPRED:                    HHHHH     EEEEE   EE    HHHHHHHHH HHHHHHEEE   EEEEE   EEE    HHHHHH     HHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:      DDDDDDDDDDDD                                                                                        
DO_IUPRED2A:   DDDDDDDDDDD DDDD                                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            FCMEYEKYPDEYKGYEEITFYEYLKTQKLTPNLQYIVMHSIAMTSETASSTIDGLKATKNFLHCLGRYGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCL 400
BenignSAV:                                                                       #                                 
gnomAD_SAV:     R           EC D   C    S     S     I  V     R N A G     Q       W          H   *            D     
Conservation:  5636573324432320102514592253753476666558777333113171386245638637974555588678477467568688764777686899
SS_PSIPRED:    HHHHH   HHH        HHHHHHH    HHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHH    EEE         HHHHHHHHH   EEE 
SS_SPIDER3:    HHHHHH    H        HHHHHHH    HHHHHHHHHHHH       HHHHHHHHHHHHHHH         EEE      HHHHHHHHHHE   EEE 
SS_PSSPRED:    HHHHHH  HHHH   HHHHHHHHHHHH   HHHHHHHHHHHHH       HHHHHHHHHHHHHHHH      EEE        HHHHHHHHHH  EEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            RHSVQCLVVDKESRKCKAIIDQFGQRIISEHFLVEDSYFPENMCSRVQYRQISRAVLITDRSVLKTDSDQQISILTVPAEEPGTFAVRVIELCSSTMTCM 500
PathogenicSAV:                                                                       L                             
BenignSAV:                       V                                         S                                       
gnomAD_SAV:    CRLA Y A G    E Q V #     V      M E C   SV  CM   HN        S       H  V       K      LW    R  M   #
Conservation:  4524266654335336354572163562423354444331121110312223545565651334223444435542463131201263336544434663
SS_PSIPRED:       EEEEEE     EEEEEE     EEEE EEEE HHH            EEEEEEEEE            EEEEE          EEEEEE        
SS_SPIDER3:       EEEEEEE    EEEEEE     EEEE EEEE HHH  H H      EEEEEEEEEE            EEEEE          EEEEEE     EE 
SS_PSSPRED:      EEEEEEE      EEEEE     EEEEEEEEE             HHHHEEEEEEEE            EEEEE          EEEEEE        
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KGTYLVHLTCTSSKTAREDLESVVQKLFVPYTEMEIENEQVEKPRILWALYFNMRDSSDISRSCYNDLPSNVYVCSGPDCGLGNDNAVKQAETLFQEICP 600
PathogenicSAV:       R                                          P                                                  
BenignSAV:                                                                F                                        
gnomAD_SAV:    T     Y          D      R   A   A  L       SG M  V  D T    F     S F    H Y    Y  V #        V RDF  
Conservation:  2363567555142134335422341257010130111002013914553367653544221213302682533453566115435144355414611427
SS_PSIPRED:      EEEEEEEEE     HHHHHHHHHHH   HHH            EEEEEEEE        HHH       EEEE        HHHHHHHHHHHHHHH  
SS_SPIDER3:      EEEEEEEEE     HHHHHHHHHHH                 EEEEEEEEEE                 EEEE        HHHHHHHHHHHHHHH  
SS_PSSPRED:       EEEEEEE     HHHHHHHHHHHHH                HHHHHHHH                   EEEE        HHHHHHHHHHHHHHH  
DO_DISOPRED3:                                                          DDDDDDDDDDD                                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50   
AA:            NEDFCPPPPNPEDIILDGDSLQPEASESSAIPEANSETFKESTNLGNLEESSE 653
BenignSAV:     S                                                    
gnomAD_SAV:    S   R #  D  HV    E        PGV#L  KL   N R           
Conservation:  13456445534545445221011121201000012121112000111111100
SS_PSIPRED:              HH                                         
SS_SPIDER3:               H            H                            
SS_PSSPRED:                                                         
DO_DISOPRED3:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:             DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:    DD   D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD