P28329  CLAT_HUMAN

Gene name: CHAT   Description: Choline O-acetyltransferase

Length: 748    GTS: 1.819e-06   GTS percentile: 0.586     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 14      BenignSAV: 22      gnomAD_SAV: 423      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MGLRTAKKRGLGGGGKWKREEGGGTRGRREVRPACFLQSGGRGDPGDVGGPAGNPGCSPHPRAATRPPPLPAHTPAHTPEWCGAASAEAAEPRRAGPHLC 100
BenignSAV:                                                   E          R                                          
gnomAD_SAV:         T  K FV        DA      * GWT Y  * V #  Q EL C  R  R RL SSS  S QT    I VQS  *G V     # Q  E T #Y
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:                                 EE     EE                                                 HH           
SS_SPIDER3:        E             E         EEE    HE                                              HHHHH            
SS_PSSPRED:                                                                                         HHHH           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            IPAPGLTKTPILEKVPRKMAAKTPSSEESGLPKLPVPPLQQTLATYLQCMRHLVSEEQFRKSQAIVQQFGAPGGLGETLQQKLLERQEKTANWVSEYWLN 200
BenignSAV:                     C  T                                                                                
gnomAD_SAV:      V AF  M V K   H IT R RN K TW S P M R P    M  KR Q          G  T   SE # S#SKS H  P V#    S  M   C  
Conservation:  1111111112100100011110000000014513658270375118612325442133301520231172014619206511621521121563222422
SS_PSIPRED:              HHH                         HHHHHHHHHHHHHHH  HHHHHHHHHHHHHH     HHHHHHHHHHHHHHHH   HHHHHHH
SS_SPIDER3:              HHHH  HHH                   HHHHHHHHHHHHHHH  HHHHHHHHHHHHHH      HHHHHHHHHHHHH H      HHHH
SS_PSSPRED:               HHHHHHHH                   HHHHHHHHHHHHHH   HHHHHHHHHHHHHH       HHHHHHHHHHHHH    E  HH H
DO_DISOPRED3:  DDDDDDDDDDD DDDD DDDDDD DDDDDDDDDDDDD                                                               
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                       
DO_IUPRED2A:   DDDD DD   DDDDDDDDDDDDDDDDDDDDDDDDDDD                                          DDD                  
MODRES_P:                              S                                                                           

                       10        20        30        40        50        60        70        80        90     
AA:            DMYLNNRLALPVNSSPAVIFARQHFPGTDDQLRFAASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNSSIMPE 300
PathogenicSAV:       G  PAD                                                                                        
BenignSAV:                          P              R     F     V  Y                                              L 
gnomAD_SAV:    YR   KC  P       M   Q    SSNH    #VRVVF IF  RS V  Y   I  #     E L G R  DRF F  QFAS    M A  KGGT LQ
Conservation:  1275126266443551422621306030152534352341333245113402153241214111102565256123633562641118151100011111
SS_PSIPRED:    HHHHH      EEE   HH         HHHHHHHHHHHHHHHHHHHHHH      HH           HHHHHH            EEEEE        
SS_SPIDER3:    HH         EE    HH H       HHHHHHHHHHHHHHHHHHHHHH       E    E   E  HHHHH     EE       EEEE        
SS_PSSPRED:    HHHHH          HHH         HHHHHHHHHHHHHHHHHHHHHHHH    HHHHHHH       HHHHHHHH           EEEEE       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                             DDDD      

                       10        20        30        40        50        60        70        80        90     
AA:            PEHVIVACCNQFFVLDVVINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMIERCICLVCLDAPGGVELSD 400
PathogenicSAV:     T                              T                                                                
BenignSAV:                                                             R                 W   H            G       N
gnomAD_SAV:     Q#IVIV  S L    A   CCH # E    # K ###TSFSKNGC  ALD  M  R  Q* KV MI L     Q L HTT CF#  L Q VS SM   N
Conservation:  3045566332668164321311243116611861451216011221145385876228229414600633422633441246243435876121101010
SS_PSIPRED:      EEEEEE  EEEEEEEEE  EEE HHHHHHHHHHHHHH            EE     HHHHHHHHHHHH  HHHHHHHHHHHEEEEEEE         H
SS_SPIDER3:      EEEEEE  EEEEEEEEE  EE  HHHHHHHHHHHHHHH         EEEEE    HHHHHHHHHH   HHHHHHHHHHHH  EEEEE         H
SS_PSSPRED:      EEEEEE  EEEEEEEEE   E  HHHHHHHHHHHHHHH          EE       HHHHHHHHHHH   HHHHHHHHHHHHHHHEE         H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    D                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            THRALQLLHGGGYSKNGANRWYDKSLQFVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHVTQSSRKLIRADSVSELPAPRRLRWKCSPEIQGHLASSAE 500
PathogenicSAV:                    C                    K                                        G               L  
BenignSAV:                                                              F  M  N                   Q                
gnomAD_SAV:    N  V     S*S N   V  R*N    S M Q S  S  *K FALY  I L  A   FE MA*G     QS  IRK  T #  #  # LD P P  FLT 
Conservation:  3013125668570014659997995486666158239223365336733231313543122111012111321112521735816333425300510632
SS_PSIPRED:    HHHHHHHHH                EEEEE     EEEEEE    HHHHHHHHHHHHHHHHH                  EE      HHHHHHHHHHHH
SS_SPIDER3:    HHHHHHHH             EE EEEEEEE    EEEEE   HH HHHHHHHHHHHHHHHH   H              EE E E  HHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHH                EEEEE     EEEEEE      HHHHHHHHHHHHHHHH                         HHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                           DDDD                           
DO_IUPRED2A:                                                                                                       
ACT_SITE:                                               H                                                          
MODRES_P:                                                                              S                           

                       10        20        30        40        50        60        70        80        90     
AA:            KLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDAFIQVALQLAFYRLHRRLVPTYESASIRRFQEGRVDNIRSATPEALAFVRAVTDHKAAVPASEKLLLL 600
PathogenicSAV:      L                                                     H           W                            
BenignSAV:                                                        S        Q                                       
gnomAD_SAV:    #  *   #   T CM A C  AL    N    TSM         S QQI  SPC# V VHQ    CMG   #   Q  T AT MIE    M V V     
Conservation:  2421231455303017006751236023266545483346645451210143425255362621864426453502410732331201111120341025
SS_PSIPRED:    HHHHHHHH  EEEEEE    HHHHHH    HHHHHHHHHHHHHHHHH       HHHHHHHHH     EE    HHHHHHHHHHH       HHHHHHHH
SS_SPIDER3:    HHHHHH    EEEEEE    HHHHHH      HHHHHHHHHHHHHHH         H HHHHH   EEEEE   HHHHHHHHHH        HHHHHHHH
SS_PSSPRED:    HHHHHHHH  EEEEEE       HHHH    HHHHHHHHHHHHHHHH      HHHHHHHHHHH    EEE   HHHHHHHHHHH       HHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                S                                          
REGION:                           GKTFIKKQKCSPD                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            KDAIRAQTAYTVMAITGMAIDNHLLALRELARAMCKELPEMFMDETYLMSNRFVLSTSQVPTTTEMFCCYGPVVPNGYGACYNPQPETILFCISSFHSCK 700
PathogenicSAV:                                                                                              C      
BenignSAV:                                                        Q                                                
gnomAD_SAV:     #  H  N N L  V       Q   PQDVVWV#*RK  KI  HG HRI  Q  V  NK    #DK Y     I     T * S*  N      G     
Conservation:  1184036202411441924454665584125030012282472724512312416387843422335353572323243246352121424344431231
SS_PSIPRED:    HHHHHHHHHHHHHHH      HHHHHHHHHHHH      HHH  HHHHHH   EE           EEEEE      EEEEEE    EEEEEEEE     
SS_SPIDER3:    HHHHHHHHHHHHHHH    HHHHHHHHHHHHHH      HHH  HHHHH   EEE H           E           EEE    EEEEEEEEE    
SS_PSSPRED:    HHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHH     HHH  HHHHHH  EEE          EEEE         EEE       EEEEEEE     
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                 Q                                         

                       10        20        30        40        
AA:            ETSSSKFAKAVEESLIDMRDLCSLLPPTESKPLATKEKATRPSQGHQP 748
gnomAD_SAV:      F   C T A D  M VTH   # L IK      TKE RK  R#  A
Conservation:  242210430031136124204211111111111001111110100111
SS_PSIPRED:       HHHHHHHHHHHHHHHHHHHHH                        
SS_SPIDER3:       HHHHHHHHHHHHHHHHHHHH            H            
SS_PSSPRED:       HHHHHHHHHHHHHHHHHHHH                         
DO_DISOPRED3:                            DDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                DDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                   DDDDDDDDDDDDDDDD