P29973  CNGA1_HUMAN

Gene name: CNGA1   Description: cGMP-gated cation channel alpha-1

Length: 690    GTS: 2.366e-06   GTS percentile: 0.771     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 12      BenignSAV: 4      gnomAD_SAV: 344      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MKLSMKNNIINTQQSFVTMPNVIVPDIEKEIRRMENGACSSFSEDDDSASTSEESENENPHARGSFSYKSLRKGGPSQREQYLPGAIALFNVNNSSNKDQ 100
BenignSAV:                                    Q                                                                    
gnomAD_SAV:    #       #V   E SI   S T   V T  Q I    *G S#  N   P     D  K YP V  R E  GRRRL L A *    T#V   Y NG  # 
Conservation:  2222222001010000000000000120000001000000202211011200010110000100100000020222222222211101013231323221
SS_PSIPRED:                              HHHHHHHHH                 HHH                      HHH HHHHHHHHHHH        
SS_SPIDER3:                              HHHHHHHHH                                            H  HHHHHHHHHH        
SS_PSSPRED:       E                       HHHHHHHH                                           HHHHHHHHHHHHHH        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDD DD      DDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:     DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            EPEEKKKKKKEKKSKSDDKNENKNDPEKKKKKKDKEKKKKEEKSKDKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYW 200
BenignSAV:                      N   D                                                                              
gnomAD_SAV:        EN # T R N   N  K R    NTQMER    Q  K     E    MR  M FY LR     CVC SS     KC R T  #R    *       
Conservation:  1222212221122221122222222211211122222222222112332222221033664221752891344253455322432867655760141016
STMI:                                                                          MMMMMMMMMMMMMMMMMMMMM             MM
SS_PSIPRED:      HHHHHHHH               HHHHH   HHHHHHHHHH     HHHH   EEE     HHHHHHHHHHHHHHHHHHHHHHHHH HHH    HHHH
SS_SPIDER3:     HHHHHHHHH               HHHHHHHHHHHHHHHHHHHHHHHHHH   EEEE     HHHHHHHHHHHHHHHHHHHHHHHHH   H H HHHHH
SS_PSSPRED:      HHHHHHHH                       HHHHHHHHHH HHHHHHHH   EEE     HHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                  
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                 
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDD                                              

                       10        20        30        40        50        60        70        80        90     
AA:            LILDYVSDIVYLIDMFVRTRTGYLEQGLLVKEELKLINKYKSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLLRFSRMFEFFQRTETRTNYPNIFRI 300
PathogenicSAV:                                                                             Q                       
gnomAD_SAV:         I  #    #  LQ K  HV  E    Q          SF*          S #     RCS T   F##W WL H I L HK   G   T V  L
Conservation:  3224224723622633342435696999572610383118112157349346549594243139234994948663733865979246676857884658
STMI:          MMMMMMMMMMMMMMMMM                      MMMMMMMMMMMMMMMMMMMM       MMMMMMMMMMMMMMMMMMMMMM           M
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHH  HHH  EEE  HHHHHHHHHH HHHHHHHHHH    EEEEE     HHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHH
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHH HEEEE  EEE  HHHHHHHHH   HHHHHHHH     EEEEE     HHHHHHHHHHHHHHHHHHHHHHHH   HHHHHH
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHHH   EE  HHHHHHHHHHHHHHHHHHHHH  HHHEEEEE    HHHHHHHHHHHHHHHHHHHHHHHHH    HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGNIGSMI 400
PathogenicSAV:                    F         G                T    R     P          T        A      A               
BenignSAV:                                                H                                                        
gnomAD_SAV:     K  I  I  TR  P M #F      Y  GI     N  TD DH PIR I #FCC I#    T     LM E   I ML  L  A SV  A#I  VVAI 
Conservation:  4585598558599978377748815968482799932214344242568577689987889899969695373974976299949788997688866688
STMI:          MMMMMMMMMMMMMMMMMMMMMMMMMM                                           MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHH                  HHHHHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHHHH       E       HH HHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHHH                  HHHHHHHHHHHHHHHHHHH           EEEHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
REGION:                                                         VYSLYWSTLTLTTIGETPPP                               
CARBOHYD:                                  N                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVY 500
PathogenicSAV:                                                                                   R                 
gnomAD_SAV:     HV ES  V RV T  VE     Q    GTK KF  L N VG    RI   QF  H S  V    V S#Y     N C LT    S  MQ A        
Conservation:  5666436539846695796873364844569067759997893537545943667389889789775498759649849965998898679666947586
STMI:          M                                                                                                   
SS_PSIPRED:    HH HHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHH      HHHHHHH  HHHHHHHHHHH HHHHHH HHH    HHHHHHHHHH   EEE
SS_SPIDER3:    H HHHHHHHHHHHHHHHHHHHHH    HHHHHHHHHHHHHHHH      HHHHHH   HHHHHHHHHHH HHHHHH H      HHHHHHHHH    EE 
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHH   HHHHHHHHHHHHHHHHH     HHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:                                                                                             LLVELVLKLQPQVY

                       10        20        30        40        50        60        70        80        90     
AA:            SPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGK 600
PathogenicSAV:                                            CS                                                       
gnomAD_SAV:      AG M RQ H RQ R  T *  #TM # G D    LSNN G  DD  F  #  # G S#SM  S #LS           IK      S  TST   T R
Conservation:  9989979789968799895669599998799476678974969997897949689769779797979699979579575796559298968923886994
SS_PSIPRED:        EEE       EEEEEEE EEEEE     EEEEEE    EE EEEEEE            EEEEE EEEEEEEEHHHHHHHHHH HHHHHHHHHHHH
SS_SPIDER3:        EEEE      EEEEE   EEEEE     EEEEEE    EEEEEEEEEE       E    EEEE  EEEEEEEHHHHHHHHHH HHHHHHHHHHHH
SS_PSSPRED:        EEEE      EEEEEE  EEEEEE    EEEEEE    EEEEEEEE             EEEEEEE EEEEE HHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
NP_BIND:       SPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGK
BINDING:                                                    E              R                                       

                       10        20        30        40        50        60        70        80        90
AA:            QILMKDGLLDLNIANAGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKPLIDTEFSSIEGPGAESGPIDST 690
gnomAD_SAV:        Q V     M    #   GFG QFPL Q  GGIR    T* V  HA V  E  #T I A  SP T   R I  T ALAV     NF 
Conservation:  559496776543342121544445365014212431432443442222221213541862157112100010211222122222110110
SS_PSIPRED:    HHHHH     HHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                       
SS_SPIDER3:    HHHHH       H      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                        
SS_PSSPRED:    HHHHHH              HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                       
DO_DISOPRED3:           DDDDDDDDDDDDDD                                     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:             DDDDDDDDDDDDDDD                                  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                        DDDDD                                                 DDDDDDDDDDDDDDD
NP_BIND:       QILMKDGLL