P31415  CASQ1_HUMAN

Gene name: CASQ1   Description: Calsequestrin-1

Length: 396    GTS: 2.341e-06   GTS percentile: 0.765     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 4      BenignSAV: 6      gnomAD_SAV: 231      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MSATDRMGPRAVPGLRLALLLLLVLGTPKSGVQGQEGLDFPEYDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLE 100
BenignSAV:     K                                                                      R   K                        
gnomAD_SAV:    KTV E#I L  LL  W T     L     *   R  #  LLK*EVMNH VS   N CN A      PVFV Y #SKHE DLET Y T     K      Q
Conservation:  2222222220222220023111111000202103224513514662586213214543122424134454452321123122423231442574487753
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                  
SS_PSIPRED:             HHHHHHHHHHHHHHHHH HHH                  EEE  HHHHHHHHHH  EEEEEEE      HHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:            HHH HHHHHHHHHHHHHHH                     EEE  HHHHHHHHHH  EEEEEEE      HH  HHHHHHHHHHHHHHHHH 
SS_PSSPRED:       HHH       HHHHHHHHHHHHH                      EEEE HHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                
DO_IUPRED2A:   D DD                                D                                         DDDDD                 
MODRES_P:                                                Y                                     S                   

                       10        20        30        40        50        60        70        80        90     
AA:            DKGVGFGLVDSEKDAAVAKKLGLTEVDSMYVFKGDEVIEYDGEFSADTIVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKSKDSEHYKAFEDA 200
PathogenicSAV:   D                                                                                                 
BenignSAV:                                            F                                                            
gnomAD_SAV:      R S R    Q YV      S   A       RN*LT FN D    IT## R E   G  K TK  *  *V    K    FT  Y    TQYCR #KG 
Conservation:  1435653348412411455484307166466622443585782444446438547534566735241083358133452376587973135236046126
SS_PSIPRED:    H   EEEEEE    HHHHHHH      EEEEEE  EEE       HHHHHHHHHHHH    EE   HHHHHHHHH    EEEEEEE     HHHHHHHHH
SS_SPIDER3:    H   EEEEE     HHHHHH    EEEEEEEEE  EEE       HHHHHHHHHH     EE    HHHHHHHH     EEEEEEE     HHHHHHHHH
SS_PSSPRED:        EEEE    H HHHHHHH      EEEEE   EEEE      HHHHHHHHHHHH   HHH   HHHHHHHHHH   EEEEEEE     HHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MODRES_P:                             T                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            AEEFHPYIPFFATFDSKVAKKLTLKLNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGFEFL 300
PathogenicSAV:                                            G                                                        
gnomAD_SAV:     Q    C    TI NR  TRQ IP  #   LHK  VQ #  V #  #NK K   LMKK #  A    EL NV   #DN#V EN TAVLS G N    QL 
Conservation:  6426583526445731254427272386657887943361257345446146516511638435744351334236341334275546683356664745
SS_PSIPRED:    HHH      EEEE  HHHHHH      EEEEE                HHHHHHHHHHH           HHHH        EEEEEEE      HHHHH
SS_SPIDER3:    HHH      EEEE  HHHHHH      EEEEE       E        HHHHHHHHHHHH        H HHHHHH      EEEEEEE      HHHHH
SS_PSSPRED:    HHHH     EEEE  HHHHHHH      EEEE                HHHHHHHHHHHH HHHH   HHHHHHHH      EEEEEEE      HHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                            DDD  DDD DDD                                              D
MODRES_P:                     S                                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            ETLKAVAQDNTENPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINTEDDDDDDDD 396
PathogenicSAV:                                                                                     T           
BenignSAV:                                            N                                                        
gnomAD_SAV:    K   T   #    R I V          ML H*  M   Y    *T* IS S V GLCI # NKA#   T DP NC  H     TS #NN N G  
Conservation:  334526834642141664488665497743447423524471165455543144432322412334454114731651254121414432331111
SS_PSIPRED:    HHHHHHHHH      EEEEEE      HHHHHHHHH         EEEEEEE     EEE         HHHHHHHHHHHH               
SS_SPIDER3:    HHHHHHHHH     EEEEEEE     HHHHHHHHHH         EEEEEEE     EEE         HHHHHHHHHHHH               
SS_PSSPRED:    HHHHHHHHHH     EEEEEE         HHHHHH          EEEEEE                 HHHHHHHHHHHHH              
DO_DISOPRED3:                                                                                      DDDDDDDDDDBB
DO_SPOTD:                                                                                            DDDDDDDDDD
DO_IUPRED2A:     DDD         D D                                    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CARBOHYD:                                                       N