P32004  L1CAM_HUMAN

Gene name: L1CAM   Description: Neural cell adhesion molecule L1

Length: 1257    GTS: 6.383e-07   GTS percentile: 0.083     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 65      BenignSAV: 19      gnomAD_SAV: 376      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MVVALRYVWPLLLCSPCLLIQIPEEYEGHHVMEPPVITEQSPRRLVVFPTDDISLKCEASGKPEVQFRWTRDGVHFKPKEELGVTVYQSPHSGSFTITGN 100
PathogenicSAV: I       S                           N                                                               
BenignSAV:              S                   NA D    M                                       S          L           
gnomAD_SAV:       # P   S                ARR A D    M    LHM F S    N         K   C KKN     S       M  LL     S #S 
Conservation:  6101222211121032111303711311112123614311231325452145415173647261415472555105131012132201111375413121
STMI:          SSSSSSSSSSSSSSSSSSS                                                                                 
SS_PSIPRED:     HHHHHHHHHHHHHHHHHHH               EEEE     EEE     EEEEEEEE     EEEEEE  EE   HHH    EEEE   EEEEEE  
SS_SPIDER3:         HHHHHHH   HHHH                EEEE    EEEE     EEEEEEE     EEEEEEE  EEE HHH    EEEE    EEEEEE  
SS_PSSPRED:     HHHHHHHHHHHHHHHHHHH                EEEE    EEEE    EEEEEEE     EEEEEEE             EEEEE    EEEEE  
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDD   D    DDDDD                                                             
DO_SPOTD:      DDDDDDDDDDDDDD                                                                                      
DO_IUPRED2A:                                  DDD                                                                  
DISULFID:                                                              C                                           
CARBOHYD:                                                                                                         N

                       10        20        30        40        50        60        70        80        90     
AA:            NSNFAQRFQGIYRCFASNKLGTAMSHEIRLMAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLT 200
PathogenicSAV:                     S                                    Y             I      S    #         C      
BenignSAV:                        V  T                                                                             
gnomAD_SAV:         H  H   H  G      TV    W I     Q  R S  SM             S              Q    R  K  MI R           
Conservation:  2111410428153735270677744123151342181326522111123462324729547143225156875013186054387317379398956410
SS_PSIPRED:        HHHH EEEEEEEE    EEEEEEEEEEEE            EEEE    EEEE          EEEEE            EEE     EEEE    
SS_SPIDER3:         HHE EEEEEEEE   EEEEEEEEEEEEEE           EEEE    EEEE          EEEEE            EEE     EEEEEEEE
SS_PSSPRED:             EEEEEEEE     EE  EEEEEE             EEEE    EEE           EEEEE            EE      EEEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                 DD  D     DDDDD     DDDDDDDDD                      D                  
DISULFID:                   C                                           C                                          

                       10        20        30        40        50        60        70        80        90     
AA:            SDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLL 300
PathogenicSAV:  #       Q        T                    L             D       R Y   D       R                        
gnomAD_SAV:         E    S                Q  T   V  K  H    # # R  L    H F     VK   M  V   HAT L S NH I     NA E  
Conservation:  1623267384357116645332323151612352300547153161312612157562252899552959791528133431311123011133426250
SS_PSIPRED:          EEEEEEE    EEEE   EEEEEE           EE        EEEE    EEEEE        EEEEE          EEEE    EEEE 
SS_SPIDER3:          EEEEEE     EEEE   EEEEEEE           E        EEE     EEEEE        EEEEEE   E     EEEE E  EEEE 
SS_PSSPRED:          EEEEEE      EE    EEEEEE                     EEEE    EEEEEEE       EEEEE         EEEEE   EEEE 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                          D      D                                            DD       DDDDD         D 
DISULFID:              C                                                      C                                    
CARBOHYD:        N                                           N                                              N      

                       10        20        30        40        50        60        70        80        90     
AA:            KVGEEDDGEYRCLAENSLGSARHAYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTM 400
PathogenicSAV:         K   P                   R #                                 KR               C              
BenignSAV:                          W                                                                         H    
gnomAD_SAV:            K H   K LR  #W V     K           Y        H E R                 M     H  DW  H T     M H    
Conservation:  2514173747282718126131425153635594822142312457673458382638291905384368024123113042130133836125112774
SS_PSIPRED:       HHH EEEEEEEEE   EEEEEEEEEEE           EEE     EEEEEEEE     EEEEEE  EE HH      EEEE  EEEEE   HHH E
SS_SPIDER3:       HH  EEEEEEEE    EEEEEEEEEEE   E EE    EEE     EEEEEE       EEEEEE  EEHHH     EEEEE  EEEEE   HH  E
SS_PSSPRED:            EEEEEEEE    EEEEEEEEEEE                  EEEEEEEE      EEEEE             EEEE  EEEEE        
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   D           D                                        DDD                                            
DISULFID:                 C                                         C                                              

                       10        20        30        40        50        60        70        80        90     
AA:            VTQCEARNRHGLLLANAYIYVVQLPAKILTADNQTYMAVQGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANGTLGIRDLQANDTGRYFCLAA 500
PathogenicSAV:        I      P     D    D                         R                    C      R P              Y   
gnomAD_SAV:          H Q  V    T   I R    V  V H #     DN      EV  V   G     K  #  F G H    D      Q   TSE RH L  V 
Conservation:  7388282816824528435365375437552520181234521506162367491905182011002541416232335936150231027160818150
SS_PSIPRED:    EEEEEEE    EEEEEEEEEEEE   EE      EEEEE    EEEE         EEEEEE           EEE     EEE    HHH EEEEEEEE
SS_SPIDER3:    EEEEEEE   EEEEEEEEEEEEE           EEEEEE   EEEEE        EEEEEE    E     EEEE     EEEEE  HHH EEEEEEEE
SS_PSSPRED:    EEEEHHHHHHHHHHHHEEEEEEE           EEEEEE  EEEEEEE       EEEEEE           EEE      EE         EEEEEEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:         C                                           C                                                C   
CARBOHYD:                                      N                                             N          N          

                       10        20        30        40        50        60        70        80        90     
AA:            NDQNNVTIMANLKVKDATQITQGPRSTIEKKGSRVTFTCQASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDVV 600
PathogenicSAV:                                       G  P                                                       N  
gnomAD_SAV:    S         K           R C     TD  M  M    S #  K     #  SQE        E L   EG        N KR#   MVN K  A 
Conservation:  3244324525172632371420381211212511415190301911501040933221150320022662322117151352018260669362617714
SS_PSIPRED:        EEEEEEEEEEE   EEEE    EEE     EEEEEEEEE      EEEEEE  EE         EEEE  EEEE    HHH EEEEEEEE    EE
SS_SPIDER3:        EEEEEEEEEEE   EEE     EEEE   EEEEEEEEE       EEEEEE  EE  E     EEEEE  EEEEEE EEHH EEEEEEEEE   EE
SS_PSSPRED:    E    EEEEEEEEEE            EEE   EEEEEEEEE      EEEEEEE             EEEE   EEEE        EEEEEEEE    E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                         DDDD                           DD  D                                          
MOTIF:                                                              RGD                                            
DISULFID:                                            C                                                   C         
CARBOHYD:          N                                                                                  N            

                       10        20        30        40        50        60        70        80        90     
AA:            ESRAQLLVVGSPGPVPRLVLSDLHLLTQSQVRVSWSPAEDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEP 700
PathogenicSAV:                                P  C         P         E                  C                #      R  
BenignSAV:                               M    C                                                                    
gnomAD_SAV:                 L  W    N    M N  HLF       S# V           V  K   TV   T          L     N KI         KL
Conservation:  1215163525293460052521011111114263625402564342461661361011110510211524201220518285127286726292391623
SS_PSIPRED:    EEEEEEEEEE        EEEE       EEEEEEE         EEEEEEEE        EEEEEEE    EEEEEE      EEEEEEEEE       
SS_SPIDER3:    EEEEEEEEEE        EEEE       EEEEEEE          EEEEEEE       EEEEEEEE   EEEEEEE      EEEEEEEEE  E    
SS_PSSPRED:    EEEEEEEEE         EEEE       EEEEEE           EEEEE          EEEE        EEEE      EEEEEEEEEE       
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                    D DD        DD DDD           DDDD                             D DDD
CARBOHYD:                                                                            N                             

                       10        20        30        40        50        60        70        80        90     
AA:            SPVSETVVTPEAAPEKNPVDVKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEP 800
PathogenicSAV:              S                          T         PM R             F N             C                
BenignSAV:                                           W                            I                                
gnomAD_SAV:     LF    D                     I   M  # Q T      A  HM  H    QE     FI NH      M I L      R I  H      
Conservation:  4017203152333821581362526134236274924412114562241828187210103092110311613261343362375568662711706624
SS_PSIPRED:         EEE             EEE      EEEEEEE  HHHH     EEEEEEEE       EEEEE   EEEE        EEEEEEEEE        
SS_SPIDER3:          EE             EEE     EEEEEE    HHH      EEEEEEEE      EEEEEE   EEEEE       EEEEEEEEE  E     
SS_PSSPRED:          EE             EEE      EEEEE    HHHH     EEEEEEE        EEEEE    EEEE       EEEEEEEE         
DO_DISOPRED3:     DDDDDDDD                                                                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDD                        D D D    D                              DD D DDDD
CARBOHYD:                               N                                                  N                       

                       10        20        30        40        50        60        70        80        90     
AA:            QVTIGYSGEDYPQAIPELEGIEILNSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPANTTSVILSGLRPYSSYHLEVQAFNG 900
BenignSAV:                                                                 Q                        Q              
gnomAD_SAV:    E AV   A  C    S        K   #    QL   P      C  S M   Q   W Q   Y R E#    TS         Q             R
Conservation:  0213869786192218113131115264414370332011538383753634121321003132101000221112221225137245509040425493
SS_PSIPRED:     EEEEE              EEEE   EEEEEEE   HHH   EE EEEEEEEE        EEEEE  EEEE     EEEE       EEEEEEEEEE 
SS_SPIDER3:     EEEEEE            EEEEE   EEEEEEEE  HHH  E EEEEEEEEEE              EEEEE    EEEEE       EEEEEEEEE  
SS_PSSPRED:      EEEE             EEEE    EEEEEEE              EEEEE                EEEEE    EEEE       EEEEEEEEE  
DO_DISOPRED3:                                                                  D                                   
DO_SPOTD:                                                                DD                                        
DO_IUPRED2A:   DDDDDDD                                                   DDD  DDDDDDD                              
CARBOHYD:                              N                       N                          N                        

                       10        20        30        40        50        60        70        80        90     
AA:            RGSGPASEFTFSTPEGVPGHPEALHLECQSNTSLLLRWQPPLSHNGVLTGYVLSYHPLDEGGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEG 1000
PathogenicSAV:                                   P     L                                                           
BenignSAV:                                                              V                                          
gnomAD_SAV:    Q    TRK          D                 H LS I #  M    A   Q VG      Q  S Q  K  A S I#   N # C R        
Conservation:  5638615100707388696361250333343335161815702379262581515310101101010113024122111401734111716162516117
SS_PSIPRED:             EEE           EEEEEE   EEEEEEE       EEEEEEEEEEE      EEEEEEE      EEEEE      EEEEEEEEEE   
SS_SPIDER3:             EEE           EEEEEEE  EEEEEE        EE EEEEEEEE      E EEEEE    E EEEEE      EEEEEEEEEE  E
SS_PSSPRED:             EEE           EEEEE    EEEEEE         EEEEEEEEEE        EEEE       EEEE       EEEEEEEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:        D DDDDDDDD D  DDDDD                                       D DDDDD D                     D     D
CARBOHYD:                                                                                    N                     

                       10        20        30        40        50        60        70        80        90     
AA:            PGEAIVREGGTMALSGISDFGNISATAGENYSVVSWVPKEGQCNFRFHILFKALGEEKGGASLSPQYVSYNQSSYTQWDLQPDTDYEIHLFKERMFRHQM 1100
PathogenicSAV:                                    L                                 C         Q                    
gnomAD_SAV:         #QK          E               F              S    R K  R       I  K    M        G       GT  # RI
Conservation:  0623211133532333150133321124232234382222224422726041111023010010230444442461514716530615141230211310
SS_PSIPRED:        EEEEEEE           EEE     EEEEEE        EEEEEEEEE            EEE     EEEEE      EEEEEEEEE       
SS_SPIDER3:        EEEE E            EEEEE   EEEEEEEE    EEEEEEEEEEEE      E  E EE      EEEE       EEEEEEEEEE      
SS_PSSPRED:        EEEEE                     EEEEE          EEEEEEEE           EEEE     EEEE       EEEEEEEEE       
DO_DISOPRED3:       DDDDDDDDDDDDD                                                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDD                                                                                           
CARBOHYD:                           N       N                                        N                             

                       10        20        30        40        50        60        70        80        90     
AA:            AVKTNGTGRVRLPPAGFATEGWFIGFVSAIILLLLVLLILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDIK 1200
PathogenicSAV:                                                                           K                  L      
gnomAD_SAV:    #   S   H  F      A    VS    V    VI V    T C   S       D   E    Q       SK        Q     NT     R VR
Conservation:  0207053121111113434557554455533555644446846554687677685684333444444566645858785477378821426337433335
STMI:                              MMMMMMMMMMMMMMMMMMMMMMM                                                         
SS_PSIPRED:    EEEEEEEEEEE       HHHHHHHHHHHHHHHHHHHHHHHHHHH                                                       
SS_SPIDER3:    EEE E  EEE        HHHHHHHHHHHHHHHHHHHHHHHH                                                          
SS_PSSPRED:     EEEE  EEEE        HHHHHHHHHHHHHHHHHHHHHHHHH                                                        
DO_DISOPRED3:  DDDDDDDDDDDDDD               DDDDDDDBBDD  DD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                    DDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                       DDDDDDDDDDDDDDDDDD DDDDDD     DDDDDDDDDDDDDDD DD
MODRES_P:                                                                    S              S  S            S      
CARBOHYD:          N                                                                                               

                       10        20        30        40        50       
AA:            PLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE 1257
PathogenicSAV:                        L                                 
BenignSAV:                                           E                  
gnomAD_SAV:            SH     YAH           G  R   V        TI      MT  
Conservation:  235645384545353344444646554635623322322202333326512211231
SS_PSIPRED:           HHHH                EE                            
SS_SPIDER3:           HH               HH HE                            
SS_PSSPRED:                                                             
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDD DD                    DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                DDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                SS   S