P34059  GALNS_HUMAN

Gene name: GALNS   Description: N-acetylgalactosamine-6-sulfatase

Length: 522    GTS: 2.912e-06   GTS percentile: 0.889     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 142      BenignSAV: 18      gnomAD_SAV: 335      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAAVVAATRWWQLLLVLSAAGMGASGAPQPPNILLLLMDDMGWGDLGVYGEPSRETPNLDRMAAEGLLFPNFYSANPLCSPSRAALLTGRLPIRNGFYTT 100
PathogenicSAV:               ME      R            #  GN#E    RG  K F      NW       V       R #LL  E     WP  # #V   
BenignSAV:                                                                       M      F                          
gnomAD_SAV:    L T   T  C    PL T   T   S #    V  R L  L  D  RA AK F   S VNQT #K MF  DVC   # YLSL V  # RW   H      
Conservation:  1111111111111101000100010001013123122222352232221311110320320330132321243332321202355454763436272333
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSS                                                                          
SS_PSIPRED:     HHHHHHHHHHHHHHHHHHHHHHH       EEEEEEE        HHH         HHHHHHH               HHHHHHHH    HHH     
SS_SPIDER3:      HHHHHHHHHHHHHH HH            EEEEEEE                    HHHHHH  EE    E       HHHHHHHH    HHH     
SS_PSSPRED:     HHHHHHHHHHHHHHHHHHH            EEEEEE                    HHHHHHH               HHHHHHHH            
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                        
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                         
DO_IUPRED2A:                                                                                                       
METAL:                                               DD                                      C                     
ACT_SITE:                                                                                    C                     

                       10        20        30        40        50        60        70        80        90     
AA:            NAHARNAYTPQEIVGGIPDSEQLLPELLKKAGYVSKIVGKWHLGHRPQFHPLKHGFDEWFGSPNCHFGPYDNKARPNIPVYRDWEMVGRYYEEFPINLKT 200
PathogenicSAV:       T   R F  #        L         R  AS #L  Y    Y#   ##     F T #VR  A       #AC   G               
BenignSAV:                        LD                                     C     Y            V                     M
gnomAD_SAV:    KTR   T AR*KF# S   L K  #D  NTDDCL Q ISR*#  # L  YL  YRCH *  F #Y VRS  K TK    M G *D L     K  N  NM
Conservation:  5111111304242156431371556355311572563477599812304282259521458493644073031114459740501721111136242111
SS_PSIPRED:               HH     HHH  HHHHHHH   EEEEEE           HHH    EE                         HH              
SS_SPIDER3:               H           HHHHHHH   E EEEE E                EEEE                                       
SS_PSSPRED:                       HHHHHHHHHHHH   EEEEEE                                                            
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
ACT_SITE:                                               H                                                          

                       10        20        30        40        50        60        70        80        90     
AA:            GEANLTQIYLQEALDFIKRQARHHPFFLYWAVDATHAPVYASKPFLGTSQRGRYGDAVREIDDSIGKILELLQDLHVADNTFVFFTSDNGAALISAPEQG 300
PathogenicSAV: E V#         P S             G  N K   F       D     W A T QD   T                   V  L  S#   F     
BenignSAV:                                   G                   Q  C     K                                        
gnomAD_SAV:    R  #   T   AS  S  KP#WQ RLY H V N#MYT IC  TRL DA   #Q* VVIQ T   TR TV  F     V I  IV ML SS  VMFT K #
Conservation:  1521921181235114600210125454413234473541011011102013151345154703441440141004102378546554455421421016
SS_PSIPRED:        HHHHHHHHHHHHHHHHH    EEEEEE           HHH       HHHHHHHHHHHHHHHHHHHHHH      EEEEEE    HHH       
SS_SPIDER3:        HHHHHHHHHHHHHHHHH    EEEEEE     E     HH       HHHHHHHHHHHHHHHHHHHHHHH      EEEEE               
SS_PSSPRED:     HHHHHHHHHHHHHHHHHHHHH    EEEE                       HHHHHHHHHHHHHHHHHHHHHH     EEEEEE              
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                 DD    
METAL:                                                                                                DN           
CARBOHYD:         N                                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            GSNGPFLCGKQTTFEGGMREPALAWWPGHVTAGQVSHQLGSIMDLFTTSLALAGLTPPSDRAIDGLNLLPTLLQGRLMDRPIFYYRGDTLMAATLGQHKA 400
PathogenicSAV: C     P RN S     #      C              DR R#PL   PVP    L   G       P      Q   #     # #  VV  #  D  
BenignSAV:                                                                                                 S       
gnomAD_SAV:    C  VSC     SM# ERLKDS  TC   PI TSR  Q*      F     V GD  LL NGST   S FS F E QVING V C CVNM VVSIFR  TT
Conservation:  7226353456237435525254321725152120340343424454461333432139010036726322233201111232243641142645001253
SS_PSIPRED:                     EE  EEEE        EEE   HHHHHHHHHHHHH                HHHHH        EEEEE   EEEEEE   EE
SS_SPIDER3:                     EEEEEEEE   EE    E   HHHHHHHHHHHHHH             E  HHHHH        EEEEE   EEEEEE   EE
SS_PSSPRED:                         EEEE          E HHHHHHHHHHHHHHHH              HHHHHH        EEEE    EEEEE   EEE
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:       DDD                                                                                             
DISULFID:             C                                                                                            

                       10        20        30        40        50        60        70        80        90     
AA:            HFWTWTNSWENFRQGIDFCPGQNVSGVTTHNLEDHTKLPLIFHLGRDPGERFPLSFASAEYQEALSRITSVVQQHQEALVPAQPQLNVCNWAVMNWAPPG 500
PathogenicSAV: Y     H S     VT   R                             V I                 P             S  S    T V   L S
BenignSAV:                                                  W            V                    F       M            
gnomAD_SAV:       I IH   YLK* T   L * I RGA#R#  EYM    V #V W  E K  # SG TK  DV    PLFIEHY AS F T HL  M  RV   * SL 
Conservation:  3425353332501111129340111113011110511115644510213600231001121103210311111112102013111211111201211111
SS_PSIPRED:    EEEE    HHHH                           EEEE               HHHHHHHHHHHHHHHHHHHH                      
SS_SPIDER3:    EEEE     H                             EEEE          HH   HHHHHHHHHHHHHHHHHHHH                      
SS_PSSPRED:    EEE                                                       HHHHHHHHHHHHHHHHHHHHHH                    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                               DD                                                                      
DISULFID:                        C                                                                     C           
CARBOHYD:                            N                                                                             

                       10        20  
AA:            CEKLGKCLTPPESIPKKCLWSH 522
PathogenicSAV: Y     F               
gnomAD_SAV:      R R  VISAA V     *A 
Conservation:  1111111111112041121111
SS_PSIPRED:                          
SS_SPIDER3:          E        E      
SS_PSSPRED:                          
DO_DISOPRED3:                       D
DO_SPOTD:                     DD D DD
DO_IUPRED2A:                         
DISULFID:      C     C          C