P35052  GPC1_HUMAN

Gene name: GPC1   Description: Glypican-1

Length: 558    GTS: 2.195e-06   GTS percentile: 0.721     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 352      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MELRARGWWLLCAAAALVACARGDPASKSRSCGEVRQIYGAKGFSLSDVPQAEISGEHLRICPQGYTCCTSEMEENLANRSHAELETALRDSSRVLQAML 100
gnomAD_SAV:                         L YA  R G                  L H      Q QVY      Y  K   KVT #N #K * TPQNG HI P TF
Conservation:  0000000000000000000000000000101001010000101100000100000311433433315673214632520241034111312121041125
STMI:          SSSSSSSSSSSSSSSSSSSSSSS                                                                             
SS_PSIPRED:      HHHHHHHHHHHHHHHHHHH          HHHHHHHHHH    HHH                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_SPIDER3:           HHHHHHHHHHHHH           HHHHHHHHHH    HHH     E     EE     E   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SS_PSSPRED:       HHHHHHHHHHHHHHHH            HHHHHHHHHHH                            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDD                                                                          
DO_SPOTD:      DDDD                DDDDDD                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                     C                             C     CC                               
CARBOHYD:                                                                                    N                     

                       10        20        30        40        50        60        70        80        90     
AA:            ATQLRSFDDHFQHLLNDSERTLQATFPGAFGELYTQNARAFRDLYSELRLYYRGANLHLEETLAEFWARLLERLFKQLHPQLLLPDDYLDCLGKQAEALR 200
BenignSAV:                                                     H                                                   
gnomAD_SAV:    T   HRY    RYR  NL QM  VALHSTLR P M*KT   WYV    C  SH DI Q K M  KLRVC  KC     QS    LNE         AVQW
Conservation:  0112112212412351042125111311226035133203412661372255113222633342589238585362111221024346557433224222
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHH  
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHHHH HHHH  HHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHH  
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHH       HHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                                                                C         
CARBOHYD:                     N                                                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            PFGEAPRELRLRATRAFVAARSFVQGLGVASDVVRKVAQVPLGPECSRAVMKLVYCAHCLGVPGARPCPDYCRNVLKGCLANQADLDAEWRNLLDSMVLI 300
gnomAD_SAV:    RY#V#T  PCPW  HT M  H   HV VM GNM Q   # S  LQ L VG         V  AST A LV  Q      F  ET#PNS   KF   V F 
Conservation:  5343232122123133333453332661221323114024121127134245625942924121224802581673369632246642572053544215
SS_PSIPRED:        HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHH                HHHHHHHHH   HHH  HHHHHHHHHHHHH
SS_SPIDER3:     H HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH       HHHHHHHHHEE   HH           H   HHH H   HHH  HHHHHHHHHHHHH
SS_PSSPRED:    H    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHH                  HHHHHHHHHHHHH  HHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
DISULFID:                                                   C         C  C        C   C      C                     

                       10        20        30        40        50        60        70        80        90     
AA:            TDKFWGTSGVESVIGSVHTWLAEAINALQDNRDTLTAKVIQGCGNPKVNPQGPGPEEKRRRGKLAPRERPPSGTLEKLVSEAKAQLRDVQDFWISLPGTL 400
gnomAD_SAV:     N# G# L  VRI # L M  E   STFH    M M       R RE      R    WCWS VTLW   L  KV  QIFK  V  HNL# #R       
Conservation:  3235122232513313531253655016344111421442316504110101111110111010113223101141244123112220131362165013
SS_PSIPRED:    HHHH     HHHHHHHHHHHHHHHHHHHHH HHHHHHHHHH             HHHHH               HHHHHHHHHHHHHHHHHHHHH     
SS_SPIDER3:    HHHHH    HHHHHHHHHHHHHHHHHHHHH HHHHHHH                  HHH H             HHHHHHHHHHHHHHHHHHHHH HHHH
SS_PSSPRED:    HHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH               HHHHH             HHHHHHHHHHHHHHHHHHHHHH  HHH
DO_DISOPRED3:                                                      DDDDD   DDDDD                                   
DO_SPOTD:                                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                             D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                   
DISULFID:                                                C                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            CSEKMALSTASDDRCWNGMARGRYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLRSAYNGNDVDFQDASDDGSGSGSGDGCLDDLCS 500
BenignSAV:                                                                                                        G
gnomAD_SAV:     GDTTS   T   H    I G # FAKATD SPV  M  RK DMY  E#  I # E T V M#  QQH#T DS NMGL  T GND DLDGS   VG   C
Conservation:  6112221201023166370223382223222522352267441242424520462233064233234317107163211312310323313003041010
SS_PSIPRED:                                                      HHHHHHHHHHHHHHHHHHHHH                             
SS_SPIDER3:                               E              EE      HHHHHHHHHHHHHHHHHHHH                              
SS_PSSPRED:       HHHH                                   EEE     HHHHHHHHHHHHHHHHHHH                               
DO_DISOPRED3:                                                                               DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                             DDDDDDDDDDDDDDDDDDDDDDDD                       DDDDDDDDDDDDDDDD  D        
DISULFID:      C             C                                                                                     
CARBOHYD:                                                                                           S S S          

                       10        20        30        40        50        
AA:            RKVSRKSSSSRTPLTHALPGLSEQEGQKTSAASCPQPPTFLLPLLLFLALTVARPRWR 558
gnomAD_SAV:    QQFN#     WM  A# F      DR T L  R S SL  P L  F  P II TTQ Q
Conservation:  0100000011000000000000100001000000000000001011110100000000
SS_PSIPRED:                                         HHHHHHHHHHHHHHHH HH  
SS_SPIDER3:                                           HHHHHHHHHHHHH      
SS_PSSPRED:                                           HHHHHHHHHHHHHH     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD D
DO_IUPRED2A:        DD DDDDDDDDDDDDDDDDDDDDDDDDDD                        
PROPEP:                                      AASCPQPPTFLLPLLLFLALTVARPRWR
LIPID:                                      S