P35398  RORA_HUMAN

Gene name: RORA   Description: Nuclear receptor ROR-alpha

Length: 523    GTS: 3.932e-07   GTS percentile: 0.022     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 5      BenignSAV: 1      gnomAD_SAV: 156      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MESAPAAPDPAASEPGSSGADAAAGSRETPLNQESARKSEPPAPVRRQSYSSTSRGISVTKKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRS 100
PathogenicSAV:                                                                                            A R      
gnomAD_SAV:        T V EA   KS  G  G V S  KS#  EQ VG  K     S      P  S   M  P           M                         
Conservation:  2222222222222222222222222222222222222222222222222222222222220022225454456555443635354547556546675868
SS_PSIPRED:                                                                        EEEEEEE       EE            EEE 
SS_SPIDER3:                                      H                                 EEEE  E        EEEEEE     E EEE 
SS_PSSPRED:                                                                          EE                            
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                               
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                  
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                      
DNA_BIND:                                                                              CKICGDKSSGIHYGVITCEGCKGFFRRS
ZN_FING:                                                                               CKICGDKSSGIHYGVITCEGC       
MODRES_M:                                           K                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            QQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAEPLTPTYNISANGLTELHDDL 200
PathogenicSAV:                             Q                                                                       
gnomAD_SAV:    R    I C  C RS                     I   Q        #              WI    #VQH   E   L M A   L  R M  QNN 
Conservation:  6243426574844373666345446635455554337344345357957565854734875543223242221122112232242234222222132301
SS_PSIPRED:                   EEE               HH    HHHHH     HHHHHHHHHHHHHHHHHHHHHHH                            
SS_SPIDER3:         EEEE   EEEEE      E    E H EHH      HEEE         HHHHHHHHHHHHHHHHHH                            
SS_PSSPRED:                    E           HHHHHHHH             HHHHHHHHHHHHHHHHHHHHHHHH                           
DO_DISOPRED3:                          D                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:      D                                       DDD       D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD        DD
DNA_BIND:      QQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGM                                                              
ZN_FING:               CPRQKNCLIDRTSRNRCQHCRLQKC                                                                   
MODRES_P:                                                                                        T                 

                       10        20        30        40        50        60        70        80        90     
AA:            SNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW 300
gnomAD_SAV:       T R A Q   G  TIGRYH  V                  VRN   P      SLL   K   IM R      TH  C      R H  DD   TM 
Conservation:  3121121333213221212034121333232212321211122201131222242220314221321142244434344734854694653266632323
SS_PSIPRED:                                                                         HHHHHHHHHHHHHHHHHH HHHHHHHHHHHH
SS_SPIDER3:                                                                         HHHHHHHHHH  H  H      HHHHHHHHH
SS_PSSPRED:                                                                         HHHHHHHHHH  HHH H  HHHHHHHHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                     
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                  
DO_IUPRED2A:   DDDDDDDDDDD       DDD D        DDDDDDDD                                                             

                       10        20        30        40        50        60        70        80        90     
AA:            QTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFI 400
gnomAD_SAV:           TA   S  Q             TV        H  E T   #             M  F T H   F    #       T NI     Y    
Conservation:  1152357412572532314652762447466547898968517642749676536654966576666746276316455684655632348667362663
SS_PSIPRED:    HHH HHHHH HHH  HHHHHHHHHHHHHHHHHHHHHHHH    HHH  HHHHHHHHHHHHHHHHHHHHHH       EEEE  EEE HHHHHH   HHHH
SS_SPIDER3:         H HH      HHHHHHHHHHH HHHHHHHHHHH     HHH  H H EEEEHHHHHHHHHHHHHHH      EEEE  EEEEHHHHHH   HHHH
SS_PSSPRED:    HHH  HHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHH    HHHHHHHH  HHHHHHHHHHH      EEEE  EE  HHHHHH   HHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SFVFEFGKSLCSMHLTEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCGRHTEKLMAFKAIYPDIVR 500
PathogenicSAV:         R                                                    Q                                      
BenignSAV:                                                                                A                        
gnomAD_SAV:     S     T    TY    V                   #        RV     #I     Q V       R  YA K   RQ AQ   T    H  V Q
Conservation:  2235535323414352434434563246423263472620483355124224833163412114223255223231544571372455125222362341
SS_PSIPRED:    HHHHHHHHHHH     HHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHH
SS_SPIDER3:    HHHHHHHHHHHH    HHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHH
SS_PSSPRED:    HHHHHHHHHHHH    HHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHHHHHHH    HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20   
AA:            LHFPPLYKELFTSEFEPAMQIDG 523
gnomAD_SAV:      L             R#     
Conservation:  11466544454235121112222
SS_PSIPRED:    HH HHHHHHHH            
SS_SPIDER3:    HH  HHHHHH             
SS_PSSPRED:    H   HHHHHHH            
DO_DISOPRED3:                 DDDDDDDD
DO_SPOTD:                      DDDDDDD
DO_IUPRED2A:                          
MOTIF:              LYKELFTSEFEPAMQIDG