P35523  CLCN1_HUMAN

Gene name: CLCN1   Description: Chloride channel protein 1

Length: 988    GTS: 2.3e-06   GTS percentile: 0.752     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 74      BenignSAV: 16      gnomAD_SAV: 540      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEQSRSQQRGGEQSWWGSDPQYQYMPFEHCTSYGLPSENGGLQHRLRKDAGPRHNVHPTQIYGHHKEQFSDREQDIGMPKKTGSSSTVDSKDEDHYSKCQ 100
PathogenicSAV:                                           R                                                         
BenignSAV:         W   H                   P                                                                       
gnomAD_SAV:       FW   CRS K R*V#E#    ## *PRI  RP   K # * G W V#D#C HIRA    S   D  L TQ      R#AA G  M    K  HPN  
Conservation:  1111111111111000011110112001111001111111111111111111111111112231213110033111110111111101000111122332
SS_PSIPRED:                                                               HH EE  HH  HHHHH                 HHHHHHHH
SS_SPIDER3:                                                                          HHHH                   HHHHHHH
SS_PSSPRED:                                                                          HHHHHH                  HHHHHH
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDD   D   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                DDDD  DDDDD           
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD        
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDD                D  DD DDDDDDDDDDDDDDDDDDDDDDDDD DDD  DDDDDDDDDDDDDDDDDDDD         

                       10        20        30        40        50        60        70        80        90     
AA:            DCIHRLGQVVRRKLGEDGIFLVLLGLLMALVSWSMDYVSAKSLQAYKWSYAQMQPSLPLQFLVWVTFPLVLILFSALFCHLISPQAVGSGIPEMKTILRG 200
PathogenicSAV:     C                      V   C   GD            C         HV  RG L                    AFS  K   RP R
BenignSAV:         HV           W                                   R                                              
gnomAD_SAV:     F RHV      T  K WV  M        AI  T DIRDN  R  QRF V IHS#   H  I  SL     F GD L   V  K I T#TSK   TVC#
Conservation:  1321223124323343665463468434553672574243132244482401411432576457624542763775254444554559655583565556
STMI:                            MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM        MMMMMMMMMMMMMMMMMMMMM    IIIIIIIIIIII     
SS_PSIPRED:    HHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHHHHHHHHHH HHHHH     HHHHH  
SS_SPIDER3:    HHHHHHHHHHHHH   H HHHHHHHHHHHHHHHHHHHHH    H HHHHHHE    HHHHHHHHHHHHHHHHHHHHHHHHHH HHHH     EEEEEE  
SS_PSSPRED:    HHHHHHHHHHHHHH    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH      HHHHHHHHHHHHHHHHHHHHHHHH          HHHHHHHH 
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:                                                                                                GSGIP        
BINDING:                                                                                               S           

                       10        20        30        40        50        60        70        80        90     
AA:            VVLKEYLTMKAFVAKVVALTAGLGSGIPVGKEGPFVHIASICAAVLSKFMSVFCGVYEQPYYYSDILTVGCAVGVGCCFGTPLGGVLFSIEVTSTYFAVR 300
PathogenicSAV:                              E     L                        C      M V      #     F EA   MK      T  
BenignSAV:                                                                                                        Q
gnomAD_SAV:    IA   *R   TCM  I T NVS S D TLE D  #IRFPR * S#  * I  LW#     CF     M A  M ISR      EE  L  K S    T#Q
Conservation:  5364445534452464456443752436452544343343341214432332426121211221425235534443343245457253355331336344
STMI:                  MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM                      IIIIIIIIIIIIIIIIIIIIII          
SS_PSIPRED:       HH   HHHHHHHHHHHHHHHH         HHHHHHHHHHHHHHHHHHHH      HHH    HHHHHHH  HH         EEEHHHHH    HH
SS_SPIDER3:    EE HHH  HHHHHHHHHHHHHHHH          HHHHHHHHHHHHHHHHHHH            E     E  E EEE      EEEEEEH      HH
SS_PSSPRED:       HHHH HHHHHHHHHHHHHHH           HHHHHHHHHHHHHHHHHH    E        EEE   EE   EEEE      EEEEEEEE    HH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:                                      GKEGP                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            NYWRGFFAATFSAFVFRVLAVWNKDAVTITALFRTNFRMDFPFDLKELPAFAAIGICCGLLGAVFVYLHRQVMLGVRKHKALSQFLAKHRLLYPGIVTFV 400
PathogenicSAV:   G   S  M  T   Q         I T        Q    L           #          A                                  
gnomAD_SAV:       SE SP   RT   QG  E*DN  II   P G S QT  LSG     G  VVRVFR   A IL   YH  #VD *  RT R      H   A TD  I
Conservation:  4665744433334434635362213423434322424223344484546453334525954874765446353334832323426534336466436643
STMI:           MMMMMMMMMMMMMMMMMMMM                          MMMMMMMMMMMMMMMMMMMMMMMMMMMMM              MMMMMMMMMM
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHH      EEEEEEEE           HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHH   HHHHHHHHH
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHH        EEEEEEEE E      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHH  HHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHH      EEEEEEEEE        HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHH HHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            IASFTFPPGMGQFMAGELMPREAISTLFDNNTWVKHAGDPESLGQSAVWIHPRVNVVIIIFLFFVMKFWMSIVATTMPIPCGGFMPVFVLGAAFGRLVGE 500
PathogenicSAV:            PC VE    #                                                 F        # R LV       E  S  R 
BenignSAV:                                         T                                                               
gnomAD_SAV:     V     A    CTPRG# SCK  R# S    R   TSYA  #DR  M    W  A    S  LIL# GT V  ISK  L ESLV M #   EL S  R 
Conservation:  4562588394866654484534352576852883311112001413148144235644552484546635444436494847454845646335645544
STMI:          MMMMMMMM      IIIIIIIIIIII                               MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM  
SS_PSIPRED:    HHHHH   HHHHHHH    HHHHHHHHHHH  HHH          HHH     HHHHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHH
SS_SPIDER3:    HHHHH       H       HHHHHHHHH     H                    HHHHHHHHHHHHHHHHHHHH        HHHHHHHHHHHHHHHHH
SS_PSSPRED:    HHHHH              HHHHHHHHHHH         HHH           EEHHHHHHHHHHHHHHHHHHHH        E HHHHHHHHHHHHHHH
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
MOTIF:                                                                                          GGFMP              
BINDING:                                                                                          F                

                       10        20        30        40        50        60        70        80        90     
AA:            IMAMLFPDGILFDDIIYKILPGGYAVIGAAALTGAVSHTVSTAVICFELTGQIAHILPMMVAVILANMVAQSLQPSLYDSIIQVKKLPYLPDLGWNQLSK 600
PathogenicSAV:                       D       V                  M R  YN   T  I                                   N 
gnomAD_SAV:     TV     S    YV F # L V   V   V S DL  A        KVM  T YN   T     T # V NV S# S    R R  SS  E V*     
Conservation:  2451236363113213424384454335543336554643554543386484344456344454656255637566366438345569688483342143
STMI:                               IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII   MMMMMMMMMMMMMMMMMMMMM                      
SS_PSIPRED:    HHHHH    EE           HHHHHHHHHHHHH      HHHHHHHHH  HHHHHHHHHHHHHHHHHHHHH   HHHHHHH                 
SS_SPIDER3:    HHHHH    EE      EE HHHHHHHHHHHHH      HHHEEHHHHH  HHHHHHHHHHHHHHHHHHHHH    HHHHHHHH                
SS_PSSPRED:    HHHHH                 HHHHHHHHHHH     HHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHH               
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
BINDING:                                                                                    Y                      

                       10        20        30        40        50        60        70        80        90     
AA:            YTIFVEDIMVRDVKFVSASYTYGELRTLLQTTTVKTLPLVDSKDSMILLGSVERSELQALLQRHLCPERRLRAAQEMARKLSELPYDGKARLAGEGLPGA 700
PathogenicSAV:                                        G                                                            
BenignSAV:               H  N                                                 Y                                    
gnomAD_SAV:    HNF A   IAH  N A      AK QP  HI I E     G  G V#   P  Q        HY RL S RPP LQTVW   Q#S#HR     RVE    
Conservation:  5242867683334144341335256103601222424656452545486944532542232002441157200012000120111111111111110100
SS_PSIPRED:      EEHHHH     EEEE    HHHHHHHHHH     EEEEE     EEEEEEEHHHHHHHHHHH  HHHHHHHHHHHHHHHH                  
SS_SPIDER3:     EEEHHH  EEEEEEEE   EHHHHHHHHH        EEE     EEEEEEEHHHHHHHHHHH   HHHHHHHHHHHHH                    
SS_PSSPRED:      EEEEEE    EEEE     HHHHHHHHHH    EEEEE      EEEEEE HHHHHHHHHHH  HHHHHHHHHHHHHHH                   
DO_DISOPRED3:                                                                         DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                               DD      DD  DDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PPGRPESFAFVDEDEDEDLSGKSELPPSLALHPSTTAPLSPEEPNGPLPGHKQQPEAPEPAGQRPSIFQSLLHCLLGRARPTKKKTTQDSTDLVDNMSPE 800
PathogenicSAV:        L                                                                                            
BenignSAV:                               L        I                                                                
gnomAD_SAV:      AL  Y        N GF    D TLA SRYA SI   C   TSR R  Q P    T   VR S V            LS E   A*        T S 
Conservation:  0100113622434311221111111111111111110100011112522211111120000111111010121400100011101111210230204212
SS_PSIPRED:          EE EE                                                       HHHHHHHHH                 HH    HH
SS_SPIDER3:          E                                                          HHHHHHHHHHH                      HH
SS_PSSPRED:                                                                      HHHHHHHHHH                        
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD       
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD             DDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            EIEAWEQEQLSQPVCFDSCCIDQSPFQLVEQTTLHKTHTLFSLLGLHLAYVTSMGKLRGVLALEELQKAIEGHTKSGVQLRPPLASFRNTTSTRKSTGAP 900
PathogenicSAV:                                           P       M                                                 
gnomAD_SAV:      KV       *T R YYYGT #   *M GEIAP * R  V VVR #IT M  #    VI D      T#K  SE   *PHLTF  LWSMIL Q   RV 
Conservation:  4402642043320413202254333443332323232413232434233345217332433342443344273311523435221232120120000110
SS_PSIPRED:    HHHHHHHHHH   EE           EE     HHHHHHHHHH    EEEE     EEEEEEHHHHHHHHH                             
SS_SPIDER3:    HHHHHHHHH    EE    EE    E       HHHHHHHHHH    EEEE     EEEEEEHHHHHHHH                              
SS_PSSPRED:    HHHHHHHHHH                       HHHHHHHHHHH   EEEEE   EEE    HHHHHHHHH                             
DO_DISOPRED3:  DDDDDDDD                                                                    DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                               DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDD                       D                                       DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                                                           S              

                       10        20        30        40        50        60        70        80        
AA:            PSSAENWNLPEDRPGATGTGDVIAASPETPVPSPSPEPPLSLAPGKVEGELEELELVESPGLEEELADILQGPSLRSTDEEDEDELIL 988
BenignSAV:                                             F   V                                           
gnomAD_SAV:      F D  D  D#KR     R        IH TYS L LSVF DLS A  K G VK M*G    Q   N WR    * IEK  K  V  
Conservation:  1111111111110110111111111111111011011111110000110112112111111101101111111110000111111111
SS_PSIPRED:                                                         EEE     HHHHHHHHH                  
SS_SPIDER3:                                                           EEE   HHHHHHHHH                  
SS_PSSPRED:                                                                 HHHHHHHHHH                 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD        DDDDD   DDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD