P35680  HNF1B_HUMAN

Gene name: HNF1B   Description: Hepatocyte nuclear factor 1-beta

Length: 557    GTS: 7.015e-07   GTS percentile: 0.104     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 81      BenignSAV: 5      gnomAD_SAV: 229      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPNFGVKLETLPLSPGSGAEPDTKPVFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNT 100
PathogenicSAV: I          F                       F                        G                D    D        F        
BenignSAV:                             L                                                                           
gnomAD_SAV:       #       F  T   F     L L   K    FLD#RM VK  L CS N PK E  SI#YSF  R # V FFCH #  N  HHN LT          
Conservation:  2212440560432036513623532533732420101103511512222222222020121100433211120134232333535231536344231423
SS_PSIPRED:          HHHHHHHHHHHH    HHHHHHHHHHH                                                         HHHHHH   H
SS_SPIDER3:          HHHHHHHHHHHH    HHHHHHHHHH                             EEE                         HHHHHH    H
SS_PSSPRED:          HHHHHHHHHHHHH   HHHHHHHHHHH                                                          HHHHH   H
DO_DISOPRED3:  D                                    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDD               DDDDDDD      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   
DO_IUPRED2A:                              D            DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
MODRES_P:                                                      S  S                      S    S                    

                       10        20        30        40        50        60        70        80        90     
AA:            EEAAEQRAEVDRMLSEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQFNQTVQSSGNMTDKSSQD 200
PathogenicSAV:          G P  N        IT      PS  E        QD #  # #F E  LV   Q#   H # L                           
gnomAD_SAV:    Q   G   QM QI                              S                   R  T     L   Q   Q   *    FA #IE NRK 
Conservation:  2331123323422325677669746749767997999777635697997699799777776436954763663243236136633222222222222222
SS_PSIPRED:    HHHHHHHHHHHHHHHH HHHHHHHHHHHHHH                 HHHHHHH       HHHHHHHHHHHHHHHHHHHHH               HH
SS_SPIDER3:    HHHHHHHHHHHHHHH  HHHHHHHHHHHHHH    HHHEEH        HHHHH       HHHHHHHHHHHHH  HHHHHH                  
SS_PSSPRED:    HHHHHHHHHHHHHHH  HHHHHHHHHHHHHHH                HHHHHHH      HHHHHHHHHHHHHHHHHHHHHH                H
DO_DISOPRED3:  DDDDDD                                                                              DDDDDDDDDDDDDDDD
DO_SPOTD:                                                                DDDDD                DDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDD         DDDD DD DD DDDDDDDDDDDDDDDDDDDDDDDDDD                     DDDDDDDDDDDDD  D  

                       10        20        30        40        50        60        70        80        90     
AA:            QLLFLFPEFSQQSHGPGQSDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF 300
PathogenicSAV:                                 H #  R# T P  S     PP  S   DG  S        #  #        #VV D     #F  G 
BenignSAV:                                K                                                                        
gnomAD_SAV:    E    L   # H    A  NV RFAH K   #C       #  R  #   NW       D G                AS                    
Conservation:  2222222222221331200221326421662696867888866599647977956946557736753757566466674665537575679999776696
SS_PSIPRED:    HHHH  HHHHH                            HHHHHHHHHHHHH     HHHHHHHHHHHHHHHHHH                 EEEEHHHH
SS_SPIDER3:    HHH   HHH                              HHHHHHHHHHHH      HHHHHHHHHHHHHHHH                 E EEEEEHE 
SS_PSSPRED:    HHHH                                   HHHHHHHHHHHHH     HHHHHHHHHHHHHHHHH                  EEEEEEE 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                     
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                          DDD       D   DDDDDDDDDDDDDDD           
DO_IUPRED2A:                 DDDDDDDDDDDDDDDDDDDDDD          DDDDDDDD DDDDDDDDDDD        DDDDDD DDDDD              
DNA_BIND:                                    MRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWF

                       10        20        30        40        50        60        70        80        90     
AA:            ANRRKEEAFRQKLAMDAYSSNQTHSLNPLLSHGSPHHQPSSSPPNKLSGVRYSQQGNNEITSSSTISHHGNSAMVTSQSVLQQVSPASLDPGHNLLSPDG 400
PathogenicSAV:  #           T                     R     P         C                 S                              
BenignSAV:                                L       N                                                                
gnomAD_SAV:                 ST SCITD SQ VSS F  SYSDDKR  F  D R E C GHK    V      G  S  TLAIR L  R#  A     DYS   S A
Conservation:  6667497797569548232223222111122432222221143112213334231212410112102123211122112132135412533332551221
SS_PSIPRED:    H HHHHHHHHHHHHHH                                                               HH                   
SS_SPIDER3:      HHHHHHHHHHHHH                                                                                     
SS_PSSPRED:      HHHHHHHHHHHHH                                                                                     
DO_DISOPRED3:              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:             DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DNA_BIND:      ANRRKEEAFRQ                                                                                         

                       10        20        30        40        50        60        70        80        90     
AA:            KMISVSGGGLPPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPF 500
PathogenicSAV:                  #                  L    T        T             R                             K     
BenignSAV:                                                                                                S        
gnomAD_SAV:      F   E V   LGS    Y            FLIA       VGR   A     A FV T  SR E    I       RR     # H  S   VP   
Conservation:  3232324615755446634632322113234484645344334752283525453654553544565597634534433223421212212224222255
SS_PSIPRED:     EE                                HHHHHHHHHH                HHHHHHH                                
SS_SPIDER3:                                           HHHHHHH                                                      
SS_PSSPRED:                                                                    HHH                                 
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDD       D D       D                 DDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50       
AA:            MAAVTQLQNSHMYAHKQEPPQYSHTSRFPSAMVVTDTSSISTLTNMSSSKQCPLQAW 557
PathogenicSAV:  T          C                                 F          
gnomAD_SAV:    V  LS R      TY   H    YP Q   PVA   N     FI TF    YTV   
Conservation:  533343552295837635324433333554334346232422233333144162126
SS_PSIPRED:       HHH                          EE     HHHHH             
SS_SPIDER3:       HH                                  HHH               
SS_PSSPRED:     HHHHH                                                   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DD     DDDDDDDDDDDDDDDDDDDDDD         D   DDDD